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* Add mammoth, a nice structural alignment program. It contains the MaxSub ↵Donnie Berkholz2007-12-101-8/+18
| | | | | | | algorithm, which is used by lots of people. (Portage version: 2.1.4_rc4) (Signed Manifest commit)
* Add mammoth, a nice structural alignment program. It contains the MaxSub ↵Donnie Berkholz2007-12-106-0/+116
| | | | | | algorithm, which is used by lots of people. (Portage version: 2.1.4_rc4)
* Adding ~amd64 as it seems to work now.Jeffrey Gardner2007-12-081-8/+8
| | | | | (Portage version: 2.1.4_rc9) (Unsigned Manifest commit)
* Adding ~amd64 as it seems to work now.Jeffrey Gardner2007-12-082-3/+6
| | | | (Portage version: 2.1.4_rc9)
* Latest version - thanks to Martin Mokrejs on bug #201495Jeffrey Gardner2007-12-071-14/+12
| | | | | (Portage version: 2.1.4_rc7) (Unsigned Manifest commit)
* Latest version - thanks to Martin Mokrejs on bug #201495Jeffrey Gardner2007-12-073-1/+76
| | | | (Portage version: 2.1.4_rc7)
* Version bump (fixes bug #191882).Markus Dittrich2007-11-241-8/+20
| | | | | (Portage version: 2.1.3.19) (Unsigned Manifest commit)
* Version bump (fixes bug #191882).Markus Dittrich2007-11-245-5/+89
| | | | (Portage version: 2.1.3.19)
* Version bump. See bug #191867.Markus Dittrich2007-11-221-8/+16
| | | | | (Portage version: 2.1.3.19) (Unsigned Manifest commit)
* Version bump. See bug #191867.Markus Dittrich2007-11-224-4/+52
| | | | (Portage version: 2.1.3.19)
* Add ~alphaRaúl Porcel2007-11-131-8/+8
| | | | | (Portage version: 2.1.3.19) (Unsigned Manifest commit)
* Add ~alphaRaúl Porcel2007-11-132-3/+6
| | | | (Portage version: 2.1.3.19)
* Got tired of launching via cli, so adding a .desktop entry.Jeffrey Gardner2007-10-221-8/+12
| | | | | (Portage version: 2.1.3.15) (Unsigned Manifest commit)
* Got tired of launching via cli, so adding a .desktop entry.Jeffrey Gardner2007-10-223-2/+21
| | | | (Portage version: 2.1.3.15)
* gotta remember keychainJeffrey Gardner2007-10-211-16/+16
| | | | | (Portage version: 2.1.3.15) (Unsigned Manifest commit)
* reverting my late-night quotehappinessJeffrey Gardner2007-10-214-9/+13
| | | | (Portage version: 2.1.3.15)
* removing specific dep on pdflib-6 as seaview appears to work with the latest ↵Jeffrey Gardner2007-10-211-8/+8
| | | | | | | pdflib (Portage version: 2.1.3.15) (Unsigned Manifest commit)
* removing specific dep on pdflib-6 as seaview appears to work with the latest ↵Jeffrey Gardner2007-10-212-3/+6
| | | | | | pdflib (Portage version: 2.1.3.15)
* Adding sci-biology/muscle as a dependency.Jeffrey Gardner2007-10-211-8/+8
| | | | | (Portage version: 2.1.3.15) (Unsigned Manifest commit)
* Adding sci-biology/muscle as a dependency.Jeffrey Gardner2007-10-212-2/+6
| | | | (Portage version: 2.1.3.15)
* Adding ~amd64 and ~ppc for seaview.Jeffrey Gardner2007-10-211-8/+8
| | | | | (Portage version: 2.1.3.15) (Unsigned Manifest commit)
* Adding ~amd64 and ~ppc for seaview.Jeffrey Gardner2007-10-212-7/+10
| | | | (Portage version: 2.1.3.15)
* Bumping to latest version which contains several new features.Jeffrey Gardner2007-10-211-22/+20
| | | | | (Portage version: 2.1.3.15) (Unsigned Manifest commit)
* Bumping to latest version which contains several new features.Jeffrey Gardner2007-10-215-7/+61
| | | | (Portage version: 2.1.3.15)
* Commenting out references to USE=mpi, which is currently broken.Jeffrey Gardner2007-10-191-12/+11
| | | | | (Portage version: 2.1.3.15) (Unsigned Manifest commit)
* Commenting out references to USE=mpi, which is currently broken.Jeffrey Gardner2007-10-193-8/+11
| | | | (Portage version: 2.1.3.15)
* Commented out a stray reference to mpi that I missed the first time.Jeffrey Gardner2007-10-141-12/+12
| | | | | (Portage version: 2.1.3.13) (Unsigned Manifest commit)
* Commented out a stray reference to mpi that I missed the first time.Jeffrey Gardner2007-10-143-9/+12
| | | | (Portage version: 2.1.3.13)
* New ncbi version and cleanup of stable ebuild.Jeffrey Gardner2007-10-131-8/+17
| | | | | (Portage version: 2.1.3.12) (Unsigned Manifest commit)
* New ncbi version and cleanup of stable ebuild.Jeffrey Gardner2007-10-134-39/+263
| | | | (Portage version: 2.1.3.12)
* Version bump (fixes bug #191861).Markus Dittrich2007-10-131-8/+20
| | | | | (Portage version: 2.1.3.12) (Unsigned Manifest commit)
* Version bump (fixes bug #191861).Markus Dittrich2007-10-135-5/+73
| | | | (Portage version: 2.1.3.12)
* Fixed wrongs SRC_URI and HOMEPAGE (see bug #195080). Also bumped to new version.Markus Dittrich2007-10-101-8/+16
| | | | | (Portage version: 2.1.3.12) (Unsigned Manifest commit)
* Fixed wrongs SRC_URI and HOMEPAGE (see bug #195080). Also bumped to new version.Markus Dittrich2007-10-104-6/+44
| | | | (Portage version: 2.1.3.12)
* Add needed quotes; don't specify the default for DESTTREE; add die messages.Donnie Berkholz2007-10-071-8/+18
| | | | | (Portage version: 2.1.3.9) (Signed Manifest commit)
* Add needed quotes; don't specify the default for DESTTREE; add die messages.Donnie Berkholz2007-10-072-5/+8
| | | | (Portage version: 2.1.3.9)
* New version (fixes bug #191874).Markus Dittrich2007-10-061-14/+16
| | | | | (Portage version: 2.1.3.11) (Unsigned Manifest commit)
* New version (fixes bug #191874).Markus Dittrich2007-10-064-1/+74
| | | | (Portage version: 2.1.3.11)
* using cvs admin -kb patch to get rid of header changesJeffrey Gardner2007-09-221-8/+8
| | | | | (Portage version: 2.1.3.9) (Unsigned Manifest commit)
* Change sed separator to :, now it doesn't fail if CC contains a path.Santiago M. Mola2007-09-201-8/+8
| | | | | (Portage version: 2.1.3.9) (Unsigned Manifest commit)
* Change sed separator to :, now it doesn't fail if CC contains a path.Santiago M. Mola2007-09-202-3/+7
| | | | (Portage version: 2.1.3.9)
* New upstream version.Olivier Fisette2007-09-191-8/+16
| | | | | (Portage version: 2.1.3.9) (Unsigned Manifest commit)
* New upstream version.Olivier Fisette2007-09-194-2/+59
| | | | (Portage version: 2.1.3.9)
* Used cvs manually to add patches without mangling them.Jeffrey Gardner2007-09-171-12/+12
| | | | | (Portage version: 2.1.3.9) (Unsigned Manifest commit)
* Used cvs manually to add patches without mangling them.Jeffrey Gardner2007-09-171-1/+4
| | | | (Portage version: 2.1.3.9)
* Fixup for amd64. Looks like repoman is going to mangle my patches again :(Jeffrey Gardner2007-09-171-12/+19
| | | | | (Portage version: 2.1.3.9) (Unsigned Manifest commit)
* Fixup for amd64. Looks like repoman is going to mangle my patches again :(Jeffrey Gardner2007-09-173-1/+100
| | | | (Portage version: 2.1.3.9)
* Pulling until I can debug the ebuild.Jeffrey Gardner2007-09-171-11/+4
| | | | | (Portage version: 2.1.3.9) (Unsigned Manifest commit)
* Pulling until I can debug the ebuild.Jeffrey Gardner2007-09-173-93/+5
| | | | (Portage version: 2.1.3.9)
* Add upstream patches and disable parallel install on amd64.Jeffrey Gardner2007-09-171-4/+19
| | | | | (Portage version: 2.1.3.9) (Unsigned Manifest commit)