summaryrefslogtreecommitdiff
diff options
context:
space:
mode:
authorOlivier Fisette <ribosome@gentoo.org>2005-01-09 18:30:28 +0000
committerOlivier Fisette <ribosome@gentoo.org>2005-01-09 18:30:28 +0000
commit3a9b5e4679f25b23415087afecec45e549e1bdd6 (patch)
tree2c6677c3154c44e0e889864a9eec1809b77c13e3 /sci-biology
parentadded ~amd64 to 1.2.1a. fixes bug #67754. (diff)
downloadhistorical-3a9b5e4679f25b23415087afecec45e549e1bdd6.tar.gz
historical-3a9b5e4679f25b23415087afecec45e549e1bdd6.tar.bz2
historical-3a9b5e4679f25b23415087afecec45e549e1bdd6.zip
Moved to sci-biology/njplot.
Diffstat (limited to 'sci-biology')
-rw-r--r--sci-biology/njplot-unrooted/ChangeLog16
-rw-r--r--sci-biology/njplot-unrooted/Manifest14
-rw-r--r--sci-biology/njplot-unrooted/files/digest-njplot-unrooted-11
-rw-r--r--sci-biology/njplot-unrooted/metadata.xml16
-rw-r--r--sci-biology/njplot-unrooted/njplot-unrooted-1.ebuild35
5 files changed, 0 insertions, 82 deletions
diff --git a/sci-biology/njplot-unrooted/ChangeLog b/sci-biology/njplot-unrooted/ChangeLog
deleted file mode 100644
index a8d592718cc7..000000000000
--- a/sci-biology/njplot-unrooted/ChangeLog
+++ /dev/null
@@ -1,16 +0,0 @@
-# ChangeLog for sci-biology/njplot-unrooted
-# Copyright 1999-2004 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/njplot-unrooted/ChangeLog,v 1.2 2004/12/24 02:32:14 swegener Exp $
-
-*njplot-unrooted-1 (23 Dec 2004)
-
- 23 Dec 2004; Olivier Fisette <ribosome@gentoo.org> +metadata.xml,
- +njplot-unrooted-1.ebuild:
- Moved from app-sci/njplot-unrooted to sci-biology/njplot-unrooted.
-
-*njplot-unrooted-1 (06 Oct 2004)
-
- 06 Oct 2004; Olivier Fisette <ribosome@gentoo.org> +metadata.xml,
- +njplot-unrooted-1.ebuild:
- Initial import.
-
diff --git a/sci-biology/njplot-unrooted/Manifest b/sci-biology/njplot-unrooted/Manifest
deleted file mode 100644
index 7e9805a9bf03..000000000000
--- a/sci-biology/njplot-unrooted/Manifest
+++ /dev/null
@@ -1,14 +0,0 @@
------BEGIN PGP SIGNED MESSAGE-----
-Hash: SHA1
-
-MD5 8b7063fead3ccbb3334ed3c069452a12 njplot-unrooted-1.ebuild 810
-MD5 57201e611df919577b3e0730db02d3c4 ChangeLog 580
-MD5 a1727bd238aff0cb1debdf9b11b21b5e metadata.xml 609
-MD5 72fe56f3a4074cf7324d469c568a242a files/digest-njplot-unrooted-1 69
------BEGIN PGP SIGNATURE-----
-Version: GnuPG v1.9.10 (GNU/Linux)
-
-iD8DBQFBy3+0I1lqEGTUzyQRArfrAKCio/B0oVGtAuWxHntw7ID0TY9iAQCcDTU4
-asoDWb0XFWReaxfLEToYzso=
-=n7QS
------END PGP SIGNATURE-----
diff --git a/sci-biology/njplot-unrooted/files/digest-njplot-unrooted-1 b/sci-biology/njplot-unrooted/files/digest-njplot-unrooted-1
deleted file mode 100644
index 5d1ded51f641..000000000000
--- a/sci-biology/njplot-unrooted/files/digest-njplot-unrooted-1
+++ /dev/null
@@ -1 +0,0 @@
-MD5 bd8228dbc78ab5858154063517d4b6e1 njplot-unrooted-1.tar.bz2 34352
diff --git a/sci-biology/njplot-unrooted/metadata.xml b/sci-biology/njplot-unrooted/metadata.xml
deleted file mode 100644
index b0cf95961f50..000000000000
--- a/sci-biology/njplot-unrooted/metadata.xml
+++ /dev/null
@@ -1,16 +0,0 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
-<pkgmetadata>
- <maintainer>
- <email>ribosome@gentoo.org</email>
- <name>Olivier Fisette</name>
- </maintainer>
- <herd>sci</herd>
- <longdescription>
- NJplot is a tree drawing program able to draw any phylogenetic tree
- expressed in the Newick phylogenetic tree format (e.g., the format used
- by the PHYLIP package). NJplot is especially convenient for rooting the
- unrooted trees obtained from parsimony, distance or maximum likelihood
- tree-building methods.
- </longdescription>
-</pkgmetadata>
diff --git a/sci-biology/njplot-unrooted/njplot-unrooted-1.ebuild b/sci-biology/njplot-unrooted/njplot-unrooted-1.ebuild
deleted file mode 100644
index 933bac0ced7f..000000000000
--- a/sci-biology/njplot-unrooted/njplot-unrooted-1.ebuild
+++ /dev/null
@@ -1,35 +0,0 @@
-# Copyright 1999-2004 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/njplot-unrooted/njplot-unrooted-1.ebuild,v 1.1 2004/12/23 21:32:58 ribosome Exp $
-
-DESCRIPTION="A phylogenetic tree drawing program which supports tree rooting"
-HOMEPAGE="http://pbil.univ-lyon1.fr/software/njplot.html"
-SRC_URI="mirror://gentoo/${P}.tar.bz2"
-LICENSE="public-domain"
-
-SLOT="0"
-KEYWORDS="~x86"
-IUSE=""
-
-DEPEND="sci-biology/ncbi-tools
- virtual/x11"
-
-src_unpack() {
- unpack ${A}
- cd ${S}
- sed -i -e "s%njplot.help%/usr/share/doc/${PF}/njplot.help%" njplot-vib.c
-}
-
-src_compile() {
- make -e || die
-}
-
-src_install() {
- dobin newicktops njplot unrooted
-
- insinto /usr/share/doc/${PF}
- doins njplot.help
-
- insinto /usr/share/${PN}
- doins test.ph
-}