diff options
| author |   Justin Lecher <jlec@gentoo.org> | 2013-02-28 07:50:09 +0000 |
|---|---|---|
| committer | Justin Lecher <jlec@gentoo.org> | 2013-02-28 07:50:09 +0000 |
| commit | f45196857e372d88d4b232f75b35adf80bbe24d8 (patch) | |
| tree | ba8267c560ad2dd64d870f1bb067afa60db069a7 /sci-biology | |
| parent | netsurf eclass preparation. (diff) | |
| download | historical-f45196857e372d88d4b232f75b35adf80bbe24d8.tar.gz historical-f45196857e372d88d4b232f75b35adf80bbe24d8.tar.bz2 historical-f45196857e372d88d4b232f75b35adf80bbe24d8.zip | |
sci-biology/rebase: Version Bump
Package-Manager: portage-2.2.0_alpha163/cvs/Linux x86_64
Manifest-Sign-Key: 0x70EB7916
Diffstat (limited to 'sci-biology')
| -rw-r--r-- | sci-biology/rebase/ChangeLog | 10 | ||||
| -rw-r--r-- | sci-biology/rebase/Manifest | 24 | ||||
| -rw-r--r-- | sci-biology/rebase/metadata.xml | 4 | ||||
| -rw-r--r-- | sci-biology/rebase/rebase-1303.ebuild | 46 |
4 files changed, 69 insertions, 15 deletions
diff --git a/sci-biology/rebase/ChangeLog b/sci-biology/rebase/ChangeLog index 32f2200f4bf2..33a7616f0221 100644 --- a/sci-biology/rebase/ChangeLog +++ b/sci-biology/rebase/ChangeLog @@ -1,6 +1,12 @@ # ChangeLog for sci-biology/rebase -# Copyright 1999-2012 Gentoo Foundation; Distributed under the GPL v2 -# $Header: /var/cvsroot/gentoo-x86/sci-biology/rebase/ChangeLog,v 1.114 2012/03/08 07:15:15 jlec Exp $ +# Copyright 1999-2013 Gentoo Foundation; Distributed under the GPL v2 +# $Header: /var/cvsroot/gentoo-x86/sci-biology/rebase/ChangeLog,v 1.115 2013/02/28 07:50:07 jlec Exp $ + +*rebase-1303 (28 Feb 2013) + + 28 Feb 2013; Justin Lecher <jlec@gentoo.org> +rebase-1303.ebuild, + metadata.xml: + Version Bump 08 Mar 2012; Justin Lecher <jlec@gentoo.org> -rebase-1006.ebuild, -rebase-1105.ebuild: diff --git a/sci-biology/rebase/Manifest b/sci-biology/rebase/Manifest index bc8fabedb6ce..d06d00d5fac1 100644 --- a/sci-biology/rebase/Manifest +++ b/sci-biology/rebase/Manifest @@ -1,16 +1,18 @@ -----BEGIN PGP SIGNED MESSAGE----- -Hash: SHA512 +Hash: SHA256 -DIST rebase-1111.tar.xz 27905208 RMD160 cf5af90f97b9a19f4a74673352dc154ac8c2087b SHA1 ba3f4aa2bab6a25c1865561d0b5584cace614a18 SHA256 a4071740cf41afdbae0ecb91648bae954b8b708b00d4b0d6bb21a746f6a9201c -DIST rebase-1202.tar.xz 25806116 RMD160 ff5050d545712f0b0d64b07fec6b66c529b23836 SHA1 bb4ea5a15cc914e891649f746d890f1a855bd775 SHA256 ac3dae93c43d44721a35cb97b1360500782367190750e47cd7dc9d71c2a6d851 -EBUILD rebase-1111.ebuild 1557 RMD160 c52ba140206eff4fb705c4f1ed957e183c96c6d7 SHA1 8d245706f1f162b2eb07a2b079127162cd4d2e21 SHA256 ef443cc60e50737442380b9444cd2d52273b6bbdeeb753039307114ff9ab8c2b -EBUILD rebase-1202.ebuild 1558 RMD160 fb75b42c28d71091a9aa1ccf87d2b531055c1989 SHA1 fcfd87b525d1df2810bb88e865c6441e8734d797 SHA256 27543b7a349980366c7e505e98d23f06bc6bd8ceea346323267fd39d2b1a9ab7 -MISC ChangeLog 14966 RMD160 c979ffd62e60da7680c557a282883dd40d2142e7 SHA1 a95670f46663d19395dd732c825606b40f678fba SHA256 07d402c62fb809371997d23ff0d2ec1b21144f74b320ee706d0fc4fdbc84a6c1 -MISC metadata.xml 811 RMD160 f1dd0a77488312defebf403ac55aa57e4d15bcdc SHA1 6fefbf2aa855c5aba0ff15dfb9c3ea90bd104482 SHA256 65603e5b252a8afc1f9e2a5db69d8dcac525f6dc669cbe1eb23bc47624c8bde2 +DIST rebase-1111.tar.xz 27905208 SHA256 a4071740cf41afdbae0ecb91648bae954b8b708b00d4b0d6bb21a746f6a9201c +DIST rebase-1202.tar.xz 25806116 SHA256 ac3dae93c43d44721a35cb97b1360500782367190750e47cd7dc9d71c2a6d851 SHA512 261e21b6bd3e0242f2936a635195414d4fda79ff8dc651a5e932b75785ffc632e9bdcee6207b3a0f0136f20197e80e7d38f3ddf52e199d56edca76a338148f4a WHIRLPOOL 1179758d2c558d16041526a495cc7732148adc0a86dd1f83a7423e0362d44c91cfb6171209fefb199ab6ed7b2bbc2743524c24b1caffdc8c14afbf8cec70318a +DIST rebase-1303.tar.xz 33033064 SHA256 8dcf7a5fef29a508177b7c4c20afdbfd5bc9223eac994ce1757dd6df58d5e629 SHA512 cd329c4e7e44e2b8eb9516340b0a762be5010785b21e3689a63312812bccda68575aa6b1b49b66a305bd67162dc3ba5e44946e662a995cd57025d8bf1e4a2578 WHIRLPOOL 75580ec43a4772ccec1b7ef70c9fcba46be5f14d402bd4645aba1a56cb713ae9a518cf2ff9b604958482de5d7abcd242934a2bdecceb7b6e763b3d083a8d5ebb +EBUILD rebase-1111.ebuild 1557 SHA256 ef443cc60e50737442380b9444cd2d52273b6bbdeeb753039307114ff9ab8c2b SHA512 743092796ae160adc80909d6935154057fcdeacecffd941e89b7034bd2a180cb54f9731d0fba08bdbc3f417b9814f2028e0bab93b976152b8c7525a65a7ad0c8 WHIRLPOOL bd7c5337e92c9741c83768400e0e0817560162a3c4e6d9390ae023b7ac3cebdd019c4e5a22f07c128434c7c954ecc12ad9ccdef2dc576ad15a6388e39fdcaa89 +EBUILD rebase-1202.ebuild 1558 SHA256 27543b7a349980366c7e505e98d23f06bc6bd8ceea346323267fd39d2b1a9ab7 SHA512 5ee1b5b067cab3410242165f339c821b324bd2639107ca7f47ca9b7a9211308c8c8e1f30d457422ba70f9fe19bac12984690e9efceaf6cc1bd7b0168c295c9d8 WHIRLPOOL 18c52a87b3fd8a56cc2f941def87831b9fab7764e4dc4b7b7480e0bb6757f66e9d96238a650eb9bbe54f13da09b9c07d979ad70d4b5add02c20949a8dd543848 +EBUILD rebase-1303.ebuild 1198 SHA256 ea3f627c475dd92b1c8a0b002e32cce8ebcd3ac00935fece864673b718791fc6 SHA512 0eb35a5c5499f37e191c97c4aa597c167e8617bcd1e972a002141cac01361678e6e81d258dc7ccda489a7e53ce35ce99aaecb40501d0a4d617d04008c2d328d4 WHIRLPOOL e830ffe5a04b98c34e81bbb4d360d4ed24043ef78423d392341c8e2dcaba410ffc3a9392e3cbcc9a9b8ae1f42b8f691f667505edb54ec53fd65146b55df24852 +MISC ChangeLog 15094 SHA256 31b56c2485558539839ac0ba6daa46db13a54de231d7948f40fe2ae7bcddd48f SHA512 9b120ba076f26c03e910ae81a75b999958332430239699518b3645a9340d503f10ecea12308c475e41cd4880bedba06e488eab7fdd6c4fbc2e6592f1e1bf9dc8 WHIRLPOOL ea786f9745341b5aa30cf733820cba2aa4d2f8bef619c602efcd2956939dbfd81464bdc53f1d90e918b70fec15806c77400de1f32fdc9a79f5deba9e4688a09a +MISC metadata.xml 813 SHA256 392179fd31cd6876ae2e2501faa8b0733704f03d0414c3668fee1f74a8462e56 SHA512 cfbd842c417a0384b17428cf36d866acbac2f89fa1496f45a908cf0d885879b2318fd21a173dc0a8ddae81c00d1c5a5646296473e199ced9028daeb004bea42a WHIRLPOOL 21c9d1a421d157ae6848a6fd99996566a3b51309e246a4aee531b0abab88698a5323d35a22430d9a21f5803402beac917f5cd295f23651f3889304bbeb65d015 -----BEGIN PGP SIGNATURE----- -Version: GnuPG v2.0.18 (GNU/Linux) +Version: GnuPG v2.0.19 (GNU/Linux) -iEYEAREKAAYFAk9YXIcACgkQgAnW8HDreRZlYgCeJtoWt6A6tZTA/vVQQfPaPs1R -Qf8An3hNsjo+Uf1cnjik6sVyy5r+5BJq -=rWL4 +iEYEAREIAAYFAlEvDDEACgkQgAnW8HDreRbU3gCfRdMs3Z6a3xqipmJkXHQP4DIb +/P0AoLKfAlXf09cMtC+j7DgMOHbn5Ou1 +=ETj1 -----END PGP SIGNATURE----- diff --git a/sci-biology/rebase/metadata.xml b/sci-biology/rebase/metadata.xml index 752a98d2dc33..734fcff7e215 100644 --- a/sci-biology/rebase/metadata.xml +++ b/sci-biology/rebase/metadata.xml @@ -1,8 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> - <longdescription> + <herd>sci-biology</herd> + <longdescription> The Restriction Enzyme data BASE is a collection of information about restriction enzymes and related proteins. It is maintained by New England Biolabs. It contains published and unpublished references, diff --git a/sci-biology/rebase/rebase-1303.ebuild b/sci-biology/rebase/rebase-1303.ebuild new file mode 100644 index 000000000000..87e0294ef32a --- /dev/null +++ b/sci-biology/rebase/rebase-1303.ebuild @@ -0,0 +1,46 @@ +# Copyright 1999-2013 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 +# $Header: /var/cvsroot/gentoo-x86/sci-biology/rebase/rebase-1303.ebuild,v 1.1 2013/02/28 07:50:08 jlec Exp $ + +EAPI=5 + +MY_PV=${PV#1} + +DESCRIPTION="A restriction enzyme database" +HOMEPAGE="http://rebase.neb.com" +SRC_URI="http://dev.gentoo.org/~jlec/distfiles/${P}.tar.xz" + +SLOT="0" +LICENSE="public-domain" +KEYWORDS="~amd64 ~ppc ~x86 ~amd64-linux ~x86-linux ~ppc-macos ~sparc-solaris ~x86-solaris" +IUSE="emboss minimal" + +RDEPEND="emboss? ( >=sci-biology/emboss-5.0.0 )" +DEPEND="${RDEPEND}" + +RESTRICT="binchecks strip" + +src_compile() { + if use emboss; then + echo; einfo "Indexing Rebase for usage with EMBOSS." + mkdir REBASE + EMBOSS_DATA="." rebaseextract -auto -infile withrefm.${MY_PV} \ + -protofile proto.${MY_PV} -equivalences \ + || die "Indexing Rebase failed." + echo + fi +} + +src_install() { + if ! use minimal; then + insinto /usr/share/${PN} + doins withrefm.${MY_PV} proto.${MY_PV} + fi + newdoc REBASE.DOC README + if use emboss; then + insinto /usr/share/EMBOSS/data/REBASE + doins REBASE/embossre.{enz,ref,sup} + insinto /usr/share/EMBOSS/data + doins REBASE/embossre.equ + fi +} |