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* Version bump, import from Science overlayAndrey Kislyuk2010-12-214-0/+63
| | | | Package-Manager: portage-2.2_rc86/cvs/Linux x86_64
* Removal of fortran.eclass, #348851Justin Lecher2010-12-163-18/+15
| | | | Package-Manager: portage-2.2.0_alpha8/cvs/Linux x86_64
* Version bump.Arfrever Frehtes Taifersar Arahesis2010-12-133-6/+64
| | | | Package-Manager: portage-2.2.0_alpha8/cvs/Linux x86_64
* Delete older ebuilds.Arfrever Frehtes Taifersar Arahesis2010-12-132-114/+0
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* Version bumpAndrey Kislyuk2010-11-293-14/+40
| | | | Package-Manager: portage-2.2_rc86/cvs/Linux x86_64
* Fixes fo various problems, #346883Justin Lecher2010-11-287-3/+373
| | | | Package-Manager: portage-2.2.0_alpha5/cvs/Linux x86_64
* Fixes for #335975, respecting LDFLAGS/CXXFLAGS, supporting lapack, making R ↵Justin Lecher2010-11-265-39/+84
| | | | | | support optional Package-Manager: portage-2.2.0_alpha5/cvs/Linux x86_64
* QA fixes from repomanJustin Lecher2010-11-155-14/+18
| | | | Package-Manager: portage-2.1.9.24/cvs/Linux x86_64
* Use system csh instead of shebangJustin Lecher2010-11-154-11/+25
| | | | Package-Manager: portage-2.1.9.24/cvs/Linux x86_64
* New package, dependency of sci-biology/repeatmasker. Ebuild written by meAndrey Kislyuk2010-11-074-0/+73
| | | | Package-Manager: portage-2.2_rc86/cvs/Linux x86_64
* Fix parallel build wrt bug 311919. Thanks to Myckel Habets ↵Kacper Kowalik2010-11-046-10/+92
| | | | | | <m.e.j.habets@biology.leidenuniv.nl> for patch and report. Fix buffer overflow wrt bug 338179 and respect LDFLAGS wrt bug 338177. Thanks to Diego Elio Pettenò for the reports. Drop old. Package-Manager: portage-2.1.9.24/cvs/Linux x86_64
* alpha/sparc stable wrt #341519Raúl Porcel2010-10-313-15/+8
| | | | Package-Manager: portage-2.1.8.3/cvs/Linux ia64
* Remove old.Ryan Hill2010-10-264-77/+16
| | | | Package-Manager: portage-2.2.0_alpha1/cvs/Linux x86_64
* Respect LDFLAGS wrt bug 342089. Thanks to Diego for the report. Bump to ↵Kacper Kowalik2010-10-224-24/+37
| | | | | | EAPI=2, add missing dies, drop empty depends. Drop old. Add missing quotes to stable ebuild. Package-Manager: portage-2.2_rc98/cvs/Linux x86_64
* x86 stable per bug 341519Thomas Kahle2010-10-213-8/+11
| | | | Package-Manager: portage-2.1.9.20/cvs/Linux i686
* Stable on amd64 wrt bug #341519Markos Chandras2010-10-193-5/+18
| | | | Package-Manager: portage-2.2_rc97/cvs/Linux x86_64
* Treeclean per bug #278192.Tomas Chvatal2010-10-184-78/+0
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* Remove doc USE flag and dependency, workaround for bug 340419Andrey Kislyuk2010-10-172-6/+9
| | | | Package-Manager: portage-2.2_rc86/cvs/Linux x86_64
* Update live ebuild for upstream svm->github migration, bug 338362. Thanks to ↵Andrey Kislyuk2010-10-174-38/+8
| | | | | | Joel Berendzen Package-Manager: portage-2.2_rc86/cvs/Linux x86_64
* Update live ebuild for upstream svm->github migration, bug 338362. Thanks to ↵Andrey Kislyuk2010-10-176-18/+39
| | | | | | Joel Berendzen Package-Manager: portage-2.2_rc86/cvs/Linux x86_64
* Update live ebuild for upstream svm->github migration, bug 338362. Thanks to ↵Andrey Kislyuk2010-10-173-8/+15
| | | | | | Joel Berendzen Package-Manager: portage-2.2_rc86/cvs/Linux x86_64
* removed old, Version Bump, FORTIFY patchJustin Lecher2010-10-167-66/+57
| | | | Package-Manager: portage-2.2_rc97/cvs/Linux x86_64
* Clean oldJustin Lecher2010-10-154-134/+16
| | | | Package-Manager: portage-2.2_rc94/cvs/Linux x86_64
* stable ppc, bug 339575Brent Baude2010-10-152-3/+6
| | | | Package-Manager: portage-2.1.8.3/cvs/Linux ppc64
* stable ppc, bug 327151Brent Baude2010-10-154-7/+10
| | | | Package-Manager: portage-2.1.8.3/cvs/Linux ppc64
* Cleaned old versions and curent ebuild; keyworded for ~-linux prefixJustin Lecher2010-10-154-65/+26
| | | | Package-Manager: portage-2.2_rc96/cvs/Linux x86_64
* Fix buffer overflows wrt bug 341089. Thanks to Diego for the report. Fix ↵Kacper Kowalik2010-10-158-456/+102
| | | | | | implicit function declarations. Drop old. Package-Manager: portage-2.2_rc92/cvs/Linux x86_64
* x86 stable wrt bug #340471Paweł Hajdan2010-10-123-15/+9
| | | | Package-Manager: portage-2.1.8.3/cvs/Linux i686
* x86 stable wrt bug #340371Paweł Hajdan2010-10-123-15/+9
| | | | Package-Manager: portage-2.1.8.3/cvs/Linux i686
* Stable on amd64 wrt bug #340471Markos Chandras2010-10-113-8/+12
| | | | Package-Manager: portage-2.2_rc91/cvs/Linux x86_64
* Stable on amd64 wrt bug #340371Markos Chandras2010-10-113-5/+18
| | | | Package-Manager: portage-2.2_rc91/cvs/Linux x86_64
* Fix openmotif dependency.Ulrich Müller2010-10-104-20/+40
| | | | | Package-Manager: portage-2.1.9.14/cvs/Linux x86_64 Manifest-Sign-Key: 0x8222EEEC
* Fix openmotif dependency.Ulrich Müller2010-10-1012-23/+42
| | | | Package-Manager: portage-2.1.9.14/cvs/Linux x86_64
* sparc stable wrt #327151Raúl Porcel2010-10-103-5/+8
| | | | Package-Manager: portage-2.1.8.3/cvs/Linux ia64
* Package taken, respect CC nowJustin Lecher2010-10-104-8/+47
| | | | Package-Manager: portage-2.2_rc91/cvs/Linux x86_64
* x86 stable wrt bug #339575Paweł Hajdan2010-10-103-15/+8
| | | | Package-Manager: portage-2.1.8.3/cvs/Linux i686
* Version bumpAndrey Kislyuk2010-10-093-2/+44
| | | | Package-Manager: portage-2.2_rc86/cvs/Linux x86_64
* Fix buffer overflows and building with --as-needed wrt bug 339753. Thanks to ↵Kacper Kowalik2010-10-057-71/+181
| | | | | | Diego for the report. Correct dependencies. Drop old. Package-Manager: portage-2.2_rc88/cvs/Linux x86_64
* Stable on amd64 wrt bug #339575Markos Chandras2010-10-043-8/+11
| | | | Package-Manager: portage-2.2_rc86/cvs/Linux x86_64
* QAJustin Lecher2010-10-034-69/+14
| | | | Package-Manager: portage-2.2_rc88/cvs/Linux x86_64
* Version Bump, 338199Justin Lecher2010-10-033-6/+79
| | | | Package-Manager: portage-2.2_rc88/cvs/Linux x86_64
* Less strict RDEPEND: ~sci-biology/hmmer-2.3.2 instead of ↵Andreas Hüttel2010-10-024-12/+27
| | | | | | =sci-biology/hmmer-2.3.2-r1. Bug 265534. Package-Manager: portage-2.1.9.13/cvs/Linux x86_64
* Fix patch to compile with make-3.82 wrt bug 336542. Thanks to Diego for the ↵Kacper Kowalik2010-10-023-11/+17
| | | | | | report. Package-Manager: portage-2.1.9/cvs/Linux x86_64
* Version bumpAndrey Kislyuk2010-09-303-22/+24
| | | | Package-Manager: portage-2.2_rc86/cvs/Linux x86_64
* Marked ~x64-macos, bug #339187Fabian Groffen2010-09-303-5/+8
| | | | Package-Manager: portage-2.2.01.16711-prefix/cvs/SunOS i386
* Version bump, drop oldAndrey Kislyuk2010-09-264-73/+14
| | | | Package-Manager: portage-2.2_rc86/cvs/Linux x86_64
* Version bumpAndrey Kislyuk2010-09-263-2/+39
| | | | Package-Manager: portage-2.2_rc86/cvs/Linux x86_64
* Version bump, drop oldAndrey Kislyuk2010-09-264-74/+22
| | | | Package-Manager: portage-2.2_rc86/cvs/Linux x86_64
* Version bumpAndrey Kislyuk2010-09-262-1/+71
| | | | Package-Manager: portage-2.2_rc86/cvs/Linux x86_64
* Version bumpAndrey Kislyuk2010-09-264-13/+37
| | | | Package-Manager: portage-2.2_rc61/cvs/Linux x86_64