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* sci-biology/cytoscape-bin: new packageAndrés Becerra2024-01-203-0/+58
| | | | Signed-off-by: Andrés Becerra <andres.becerra@gmail.com>
* Revert "sci-biology/cmdock: make python optional"Anna (cybertailor) Vyalkova2024-01-201-7/+0
| | | | | | | This reverts commit d1a766a47405d4cfeced96a49b3bd70f81bd9a94. Closes: https://bugs.gentoo.org/922486 Signed-off-by: Anna (cybertailor) Vyalkova <cyber+gentoo@sysrq.in>
* sci-biology/jalview-bin: add version 2.11.3.2Andrés Becerra2024-01-182-0/+36
| | | | Signed-off-by: Andrés Becerra <andres.becerra@gmail.com>
* sci-biology/jalview-bin: fix licenseAndrés Becerra2024-01-181-1/+1
| | | | Signed-off-by: Andrés Becerra <andres.becerra@gmail.com>
* sci-biology/cmdock: make python optionalAnna (cybertailor) Vyalkova2024-01-161-0/+7
| | | | Signed-off-by: Anna (cybertailor) Vyalkova <cyber+gentoo@sysrq.in>
* */*: move {app-doc → app-text}/doxygenTakuya Wakazono2024-01-133-3/+3
| | | | Signed-off-by: Takuya Wakazono <pastalian46@gmail.com>
* sci-biology/cmdock: fix buildAnna (cybertailor) Vyalkova2024-01-093-0/+260
| | | | | Closes: https://bugs.gentoo.org/901345 Signed-off-by: Anna (cybertailor) Vyalkova <cyber+gentoo@sysrq.in>
* sci-biology/cmdock: drop *really* unused filesAnna (cybertailor) Vyalkova2024-01-094-72/+2
| | | | | Closes: https://bugs.gentoo.org/921229 Signed-off-by: Anna (cybertailor) Vyalkova <cyber+gentoo@sysrq.in>
* Revert "sci-biology/cmdock: remove unused patches"Anna (cybertailor) Vyalkova2024-01-094-0/+85
| | | | | | This reverts commit 1298cd25348ad37dac19c0838415436a8c18d3f5. Signed-off-by: Anna (cybertailor) Vyalkova <cyber+gentoo@sysrq.in>
* sci-biology/cmdock: remove unused patchesMichael Mair-Keimberger2023-12-304-85/+0
| | | | Signed-off-by: Michael Mair-Keimberger <mmk@levelnine.at>
* sci-biology/jalview-bin: add missing Manifest, fix QAHuang Rui2023-11-021-0/+1
| | | | Signed-off-by: Huang Rui <vowstar@gmail.com>
* New ebuild for JalView (binary)Andrés Becerra2023-10-302-0/+51
| | | | Signed-off-by: Andrés Becerra <andres.becerra@gmail.com>
* */*: reassign cybertailor's packagesViorel Munteanu2023-10-052-8/+2
| | | | Signed-off-by: Viorel Munteanu <ceamac@gentoo.org>
* sci-biology/geneathome: update app_info.xmlAnna (cybertailor) Vyalkova2023-06-122-0/+1
| | | | Signed-off-by: Anna (cybertailor) Vyalkova <cyber+gentoo@sysrq.in>
* sci-biology/geneathome: fix build with gcc 13Anna (cybertailor) Vyalkova2023-06-114-10/+99
| | | | Signed-off-by: Anna (cybertailor) Vyalkova <cyber+gentoo@sysrq.in>
* */*: drop dead py3.9 implAnna (cybertailor) Vyalkova2023-05-021-1/+1
| | | | Signed-off-by: Anna (cybertailor) Vyalkova <cyber+gentoo@sysrq.in>
* */*: update metadata schema uriAnna (cybertailor) Vyalkova2023-03-042-2/+2
| | | | Signed-off-by: Anna (cybertailor) Vyalkova <cyber+gentoo@sysrq.in>
* sci-biology/cmdock: drop 0.1.4-r2Anna (cybertailor) Vyalkova2023-02-192-110/+0
| | | | Signed-off-by: Anna (cybertailor) Vyalkova <cyber+gentoo@sysrq.in>
* sci-biology/cmdock: add 0.2.0Anna (cybertailor) Vyalkova2023-01-074-0/+178
| | | | Signed-off-by: Anna (cybertailor) Vyalkova <cyber+gentoo@sysrq.in>
* sci-biology/cmdock: update SRC_URIAnna (cybertailor) Vyalkova2022-12-122-3/+3
| | | | Signed-off-by: Anna (cybertailor) Vyalkova <cyber+gentoo@sysrq.in>
* sci-biology/cmdock: drop 0.1.3-r1Anna (cybertailor) Vyalkova2022-12-124-151/+0
| | | | Signed-off-by: Anna (cybertailor) Vyalkova <cyber+gentoo@sysrq.in>
* sci-biology/cmdock: fix docs buildAnna (cybertailor) Vyalkova2022-12-121-13/+14
| | | | | Closes: https://bugs.gentoo.org/884905 Signed-off-by: Anna (cybertailor) Vyalkova <cyber+gentoo@sysrq.in>
* sci-biology/geneathome: set file owner to rootAnna (cybertailor) Vyalkova2022-06-262-3/+4
| | | | Signed-off-by: Anna (cybertailor) Vyalkova <cyber+gentoo@sysrq.in>
* sci-biology/cmdock: set file owner to rootAnna (cybertailor) Vyalkova2022-06-261-1/+1
| | | | Signed-off-by: Anna (cybertailor) Vyalkova <cyber+gentoo@sysrq.in>
* sci-biology/cmdock: fix app_info.xmlAnna (cybertailor) Vyalkova2022-06-261-6/+9
| | | | Signed-off-by: Anna (cybertailor) Vyalkova <cyber+gentoo@sysrq.in>
* sci-biology/cmdock: boinc fixAnna (cybertailor) Vyalkova2022-06-251-8/+20
| | | | | | See https://www.sidock.si/sidock/forum_thread.php?id=125&postid=1427 Signed-off-by: Anna (cybertailor) Vyalkova <cyber+gentoo@sysrq.in>
* sci-biology/cmdock: fix CPU flags detectionAnna (cybertailor) Vyalkova2022-06-023-4/+21
| | | | Signed-off-by: Anna (cybertailor) Vyalkova <cyber+gentoo@sysrq.in>
* sci-biology/geneathome: update to new BOINCAnna (cybertailor) Vyalkova2022-05-303-12/+8
| | | | Signed-off-by: Anna (cybertailor) Vyalkova <cyber+gentoo@sysrq.in>
* sci-biology/geneathome: drop 1.10Anna (cybertailor) Vyalkova2022-05-301-78/+0
| | | | Signed-off-by: Anna (cybertailor) Vyalkova <cyber+gentoo@sysrq.in>
* sci-biology/cmdock: add 0.1.4Anna (cybertailor) Vyalkova2021-11-255-90/+147
| | | | Signed-off-by: Anna (cybertailor) Vyalkova <cyber+gentoo@sysrq.in>
* sci-biology/geneathome: require in-source buildAnna (cybertailor) Vyalkova2021-07-251-3/+7
| | | | | | | | config.h was present somehow in my /usr/include/boinc so I didn't notice the bug. Should be fixed now. Closes: https://bugs.gentoo.org/803893 Signed-off-by: Anna (cybertailor) Vyalkova <cyber+gentoo@sysrq.in>
* sci-biology/geneathome: revbump (new eclass)Anna (cybertailor) Vyalkova2021-07-221-0/+59
| | | | Signed-off-by: Anna (cybertailor) Vyalkova <cyber+gentoo@sysrq.in>
* sci-biology/cmdock: revbump (new eclass)Anna (cybertailor) Vyalkova2021-07-222-1/+102
| | | | | | | Also includes a hack to install both sphinx and doxygen docs. pkgcheck isn't very happy about it, but who cares. Signed-off-by: Anna (cybertailor) Vyalkova <cyber+gentoo@sysrq.in>
* sci-biology/cmdock: make it prettier, fix permsAnna (cybertailor) Vyalkova2021-07-223-12/+30
| | | | Signed-off-by: Anna (cybertailor) Vyalkova <cyber+gentoo@sysrq.in>
* sci-biology/cmdock: drop obsoleteAnna (cybertailor) Vyalkova2021-07-018-242/+4
| | | | Signed-off-by: Anna (cybertailor) Vyalkova <cyber+gentoo@sysrq.in>
* sci-biology/cmdock: add 0.1.3Anna (cybertailor) Vyalkova2021-05-298-18/+215
| | | | | | | | * revise deps * fix symlinks * replace slotting with subslotting Signed-off-by: Anna (cybertailor) Vyalkova <cyber+gentoo@sysrq.in>
* sci-biology/geneathome: fix unpackAnna Vyalkova2021-05-231-2/+2
| | | | | Closes: https://bugs.gentoo.org/791409 Signed-off-by: Anna Vyalkova <cyber+gentoo@sysrq.in>
* licenses: add sunpro and turkowskiAnna Vyalkova2021-05-221-1/+1
| | | | Signed-off-by: Anna Vyalkova <cyber+gentoo@sysrq.in>
* sci-biology/cmdock/files: increment <version_num/>Anna Vyalkova2021-05-221-1/+1
| | | | Signed-off-by: Anna Vyalkova <cyber+gentoo@sysrq.in>
* sci-biology/cmdock/files: fix filenamesAnna Vyalkova2021-05-212-2/+2
| | | | Signed-off-by: Anna Vyalkova <cyber@sysrq.in>
* sci-biology/geneathome: fix wrong filenameAnna Vyalkova2021-05-202-1/+1
| | | | Signed-off-by: Anna Vyalkova <cyber@sysrq.in>
* sci-biology/cmdock: fixes in deps and app_info.xmlAnna Vyalkova2021-05-202-3/+4
| | | | | | | | 1) Python is only used by Sphinx to build documentation 2) Rename app_config.xml to app_info.xml: https://boinc.berkeley.edu/wiki/Anonymous_platform Signed-off-by: Anna Vyalkova <cyber@sysrq.in>
* sci-biology/cmdock: add missing PYTHON_DEPSAndrew Ammerlaan2021-05-191-1/+3
| | | | | Package-Manager: Portage-3.0.18, Repoman-3.0.3 Signed-off-by: Andrew Ammerlaan <andrewammerlaan@gentoo.org>
* sci-biology/geneathome: initial importAnna Vyalkova2021-05-195-0/+155
| | | | Signed-off-by: Anna Vyalkova <cyber@sysrq.in>
* sci-biology/cmdock: initial importAnna Vyalkova2021-05-196-0/+181
Signed-off-by: Anna Vyalkova <cyber@sysrq.in>