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| author |   Justin Lecher <jlec@gentoo.org> | 2015-10-12 10:02:30 +0200 |
|---|---|---|
| committer | Justin Lecher <jlec@gentoo.org> | 2015-10-12 10:06:32 +0200 |
| commit | 6be64841077924e592e49be11bc2c62672c38bd5 (patch) | |
| tree | 91e75f2792981b4ed660cd958bac9ba49b786153 /sci-chemistry/prody | |
| parent | dev-util/cmake: 3.3.1-r1 stable on x86, bug #561620 (diff) | |
| download | gentoo-6be64841077924e592e49be11bc2c62672c38bd5.tar.gz gentoo-6be64841077924e592e49be11bc2c62672c38bd5.tar.bz2 gentoo-6be64841077924e592e49be11bc2c62672c38bd5.zip | |
sci-chemistry/prody: New Package
ebuild written by me
Package-Manager: portage-2.2.22
Signed-off-by: Justin Lecher <jlec@gentoo.org>
Diffstat (limited to 'sci-chemistry/prody')
| -rw-r--r-- | sci-chemistry/prody/Manifest | 1 | ||||
| -rw-r--r-- | sci-chemistry/prody/metadata.xml | 8 | ||||
| -rw-r--r-- | sci-chemistry/prody/prody-1.6.ebuild | 44 |
3 files changed, 53 insertions, 0 deletions
diff --git a/sci-chemistry/prody/Manifest b/sci-chemistry/prody/Manifest new file mode 100644 index 000000000000..df88491d4cbf --- /dev/null +++ b/sci-chemistry/prody/Manifest @@ -0,0 +1 @@ +DIST prody-1.6.tar.gz 5333629 SHA256 db5f2223005640e64b5bfd5ef147744381b9b170ced61db7bc8f3a0fdb583c86 SHA512 d913ad45b034f1b0e7e36428a6f8f199b365b94bd85bee5ade8eb9eb2b04a18c93d894a2abd18b3a1342597725ffbf96f8ce8a49191fc27e5608f3d2c9a3c49a WHIRLPOOL a6435d88046970cca53290b258017d09b19457c4bbd5530743a3dc9cbc023ee78a28a4df81b190a5499df114d9909afff0697e571ef5bc4726311f4ea287c4be diff --git a/sci-chemistry/prody/metadata.xml b/sci-chemistry/prody/metadata.xml new file mode 100644 index 000000000000..ae9ec7c5f6a4 --- /dev/null +++ b/sci-chemistry/prody/metadata.xml @@ -0,0 +1,8 @@ +<?xml version="1.0" encoding="UTF-8"?> +<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> +<pkgmetadata> + <herd>sci-chemistry</herd> + <maintainer> + <email>jlec@gentoo.org</email> + </maintainer> +</pkgmetadata> diff --git a/sci-chemistry/prody/prody-1.6.ebuild b/sci-chemistry/prody/prody-1.6.ebuild new file mode 100644 index 000000000000..a2ece4dfd984 --- /dev/null +++ b/sci-chemistry/prody/prody-1.6.ebuild @@ -0,0 +1,44 @@ +# Copyright 1999-2015 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 +# $Id$ + +EAPI=5 + +PYTHON_COMPAT=( python2_7 ) + +inherit distutils-r1 + +DESCRIPTION="Protein Dynamics Analysis" +HOMEPAGE="http://prody.csb.pitt.edu/ https://github.com/prody/ProDy" +SRC_URI="https://github.com/prody/ProDy/archive/v${PV}.tar.gz -> ${P}.tar.gz" + +SLOT="0" +LICENSE="MIT" +KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux" +IUSE="test" + +RDEPEND=" + dev-python/ipython[${PYTHON_USEDEP}] + dev-python/matplotlib[${PYTHON_USEDEP}] + >=dev-python/numpy-1.7[${PYTHON_USEDEP}] + dev-python/pyparsing[${PYTHON_USEDEP}] + sci-biology/biopython[${PYTHON_USEDEP}] + sci-libs/scipy[${PYTHON_USEDEP}] +" +DEPEND="${RDEPEND} + test? ( dev-python/nose[${PYTHON_USEDEP}] )" + +S="${WORKDIR}"/ProDy-${PV} + +DISTUTILS_IN_SOURCE_BUILD=true + +python_prepare_all() { + emake remove + distutils-r1_python_prepare_all +} + +python_test() { + cd "${BUILD_DIR}" || die + PATH="${S}"/scripts:${PATH} \ + nosetests --verbose || die +} |