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* sci-libs/pytorch: add 1.12.1Alfredo Tupone2023-02-122-0/+63
| | | | Signed-off-by: Alfredo Tupone <tupone@gentoo.org>
* sci-libs/caffe2: add 1.12.1Alfredo Tupone2023-02-122-0/+166
| | | | Signed-off-by: Alfredo Tupone <tupone@gentoo.org>
* sci-libs/gdal: Stabilize 3.6.2 ppc64, #893886Sam James2023-02-111-1/+1
| | | | Signed-off-by: Sam James <sam@gentoo.org>
* sci-libs/gdal: Stabilize 3.6.2 amd64, #893886Sam James2023-02-111-1/+1
| | | | Signed-off-by: Sam James <sam@gentoo.org>
* sci-libs/gdal: Stabilize 3.6.2 x86, #893886Sam James2023-02-111-1/+1
| | | | Signed-off-by: Sam James <sam@gentoo.org>
* sci-libs/gdal: Stabilize 3.6.2 arm64, #893886Sam James2023-02-111-1/+1
| | | | Signed-off-by: Sam James <sam@gentoo.org>
* sci-libs/branca: add 0.6.0Alfredo Tupone2023-02-093-0/+43
| | | | Signed-off-by: Alfredo Tupone <tupone@gentoo.org>
* sci-libs/rocBLAS: block >=dev-libs/msgpack-5.0.0Marek Szuba2023-02-072-3/+3
| | | | | | | | | | | | For anyone who might try to fix this, it's a bit of a funny one - the CMake file which looks for "msgpack" rather than "msgpackc-cxx" is in fact part of dev-util/Tensile, not sci-libs/rocBLAS itself. The reason why it's rocBLAS that fails is that C/C++ bits of Tensile is installed as sources to be incorporated into other projects. Still, it's rocBLAS which has dev-libs/msgpack in its list of dependencies so this is where the version cap goes. Signed-off-by: Marek Szuba <marecki@gentoo.org>
* sci-libs/fflas-ffpack: drop 2.4.3-r2Michael Orlitzky2023-02-071-73/+0
| | | | Signed-off-by: Michael Orlitzky <mjo@gentoo.org>
* sci-libs/fflas-ffpack: stabilize 2.4.3-r3 for amd64Michael Orlitzky2023-02-071-2/+2
| | | | Signed-off-by: Michael Orlitzky <mjo@gentoo.org>
* sci-libs/ViSP: drop 3.3.0-r1Andreas Sturmlechner2023-02-072-112/+0
| | | | Signed-off-by: Andreas Sturmlechner <asturm@gentoo.org>
* sci-libs/opencascade: Stabilize 7.7.0-r1 amd64, #893360Sam James2023-02-061-2/+2
| | | | Signed-off-by: Sam James <sam@gentoo.org>
* sci-libs/libsc: drop 2.3.1-r1, 2.3.3Andreas Sturmlechner2023-02-016-282/+0
| | | | Signed-off-by: Andreas Sturmlechner <asturm@gentoo.org>
* sci-libs/p4est: drop 2.3.1-r1, 2.3.3Andreas Sturmlechner2023-02-016-274/+0
| | | | Signed-off-by: Andreas Sturmlechner <asturm@gentoo.org>
* sci-libs/volk: drop 2.5.0Andreas Sturmlechner2023-02-012-46/+0
| | | | Signed-off-by: Andreas Sturmlechner <asturm@gentoo.org>
* sci-libs/rtabmap: drop 0.20.13-r1Andreas Sturmlechner2023-02-012-69/+0
| | | | Signed-off-by: Andreas Sturmlechner <asturm@gentoo.org>
* sci-libs/rocThrust: drop 5.0.2-r1Andreas Sturmlechner2023-02-012-77/+0
| | | | Signed-off-by: Andreas Sturmlechner <asturm@gentoo.org>
* sci-libs/rocSPARSE: drop 5.0.2Andreas Sturmlechner2023-02-012-141/+0
| | | | Signed-off-by: Andreas Sturmlechner <asturm@gentoo.org>
* sci-libs/rocSOLVER: drop 5.0.2Andreas Sturmlechner2023-02-012-78/+0
| | | | Signed-off-by: Andreas Sturmlechner <asturm@gentoo.org>
* sci-libs/rocRAND: drop 5.0.2Andreas Sturmlechner2023-02-012-74/+0
| | | | Signed-off-by: Andreas Sturmlechner <asturm@gentoo.org>
* sci-libs/rocPRIM: drop 5.0.2Andreas Sturmlechner2023-02-012-78/+0
| | | | Signed-off-by: Andreas Sturmlechner <asturm@gentoo.org>
* sci-libs/rocFFT: drop 5.0.2-r1Andreas Sturmlechner2023-02-013-203/+0
| | | | Signed-off-by: Andreas Sturmlechner <asturm@gentoo.org>
* sci-libs/rocBLAS: drop 5.0.2-r2Andreas Sturmlechner2023-02-013-211/+0
| | | | Signed-off-by: Andreas Sturmlechner <asturm@gentoo.org>
* sci-libs/hipSPARSE: drop 5.0.2Andreas Sturmlechner2023-02-012-106/+0
| | | | Signed-off-by: Andreas Sturmlechner <asturm@gentoo.org>
* sci-libs/hipFFT: drop 5.0.2Andreas Sturmlechner2023-02-014-110/+0
| | | | Signed-off-by: Andreas Sturmlechner <asturm@gentoo.org>
* sci-libs/hipCUB: drop 5.0.2Andreas Sturmlechner2023-02-012-75/+0
| | | | Signed-off-by: Andreas Sturmlechner <asturm@gentoo.org>
* sci-libs/hipBLAS: drop 5.0.2Andreas Sturmlechner2023-02-012-43/+0
| | | | Signed-off-by: Andreas Sturmlechner <asturm@gentoo.org>
* sci-libs/rocBLAS: add 5.4.2Yiyang Wu2023-01-316-0/+185
| | | | | | Closes: https://github.com/gentoo/gentoo/pull/29319 Signed-off-by: Yiyang Wu <xgreenlandforwyy@gmail.com> Signed-off-by: Benda Xu <heroxbd@gentoo.org>
* sci-libs/rocBLAS: add github upstream metadataYiyang Wu2023-01-311-4/+7
| | | | | Signed-off-by: Yiyang Wu <xgreenlandforwyy@gmail.com> Signed-off-by: Benda Xu <heroxbd@gentoo.org>
* sci-libs/vtk: fix build with gcc-13Bernd Waibel2023-01-303-0/+52
| | | | | | | | | Add #include <cstdint> to build with gcc-13 Closes: https://bugs.gentoo.org/892435 Signed-off-by: Bernd Waibel <waebbl-gentoo@posteo.net> Closes: https://github.com/gentoo/gentoo/pull/29329 Signed-off-by: Sam James <sam@gentoo.org>
* sci-libs/cantera: drop old 2.5.1-r4Sergey Torokhov2023-01-303-276/+0
| | | | | Signed-off-by: Sergey Torokhov <torokhov-s-a@yandex.ru> Signed-off-by: Andrew Ammerlaan <andrewammerlaan@gentoo.org>
* sci-libs/cantera: 2.6.0-r2 revision bumpSergey Torokhov2023-01-302-0/+200
| | | | | | | | | | | | | | | 1. EAPI8 bump 2. Add Python 3.11 compat, rm deprecated open U option (upstream patch) 3. Rectrict USE=lapack with >=sci-libs/sundials-6.5.0[lapack?] 4. Set std=c++14 to avoid build fail with upcoming dev-libs/boost-1.82 and sci-libs/sundials-6.5.0 detection (the last is strange). Bug: https://bugs.gentoo.org/888667 Closes: https://bugs.gentoo.org/888527 Closes: https://bugs.gentoo.org/890427 Signed-off-by: Sergey Torokhov <torokhov-s-a@yandex.ru> Signed-off-by: Andrew Ammerlaan <andrewammerlaan@gentoo.org>
* sci-libs/cfitsio: add 4.2.0Mario Haustein2023-01-294-0/+160
| | | | | | Signed-off-by: Mario Haustein <mario.haustein@hrz.tu-chemnitz.de> Closes: https://github.com/gentoo/gentoo/pull/28666 Signed-off-by: Andrew Ammerlaan <andrewammerlaan@gentoo.org>
* sci-libs/cartopy: drop 0.21.0-r1Thomas Beierlein2023-01-292-82/+0
| | | | Signed-off-by: Thomas Beierlein <tomjbe@gentoo.org>
* sci-libs/cartopy: Fix dependencyThomas Beierlein2023-01-291-2/+2
| | | | | Closes: https://bugs.gentoo.org/891231 Signed-off-by: Thomas Beierlein <tomjbe@gentoo.org>
* sci-libs/opencascade: drop 7.5.3-r8Bernd Waibel2023-01-286-429/+0
| | | | | | | | | Cleanup old. No consumers left for this version in ::gentoo. There's one consumer for that version in the ::science repo. Signed-off-by: Bernd Waibel <waebbl-gentoo@posteo.net> Closes: https://github.com/gentoo/gentoo/pull/29296 Signed-off-by: Andreas Sturmlechner <asturm@gentoo.org>
* sci-libs/votca-tools: treecleanJakov Smolić2023-01-274-105/+0
| | | | | | Closes: https://bugs.gentoo.org/841830 Closes: https://bugs.gentoo.org/862444 Signed-off-by: Jakov Smolić <jsmolic@gentoo.org>
* sci-libs/libgenome: treecleanJakov Smolić2023-01-274-78/+0
| | | | Signed-off-by: Jakov Smolić <jsmolic@gentoo.org>
* sci-libs/libmems: treecleanJakov Smolić2023-01-2711-392/+0
| | | | | Closes: https://bugs.gentoo.org/677558 Signed-off-by: Jakov Smolić <jsmolic@gentoo.org>
* sci-libs/opencascade: drop 7.5.2-r6Zoltan Puskas2023-01-272-176/+0
| | | | | | Signed-off-by: Zoltan Puskas <zoltan@sinustrom.info> Closes: https://github.com/gentoo/gentoo/pull/29293 Signed-off-by: Joonas Niilola <juippis@gentoo.org>
* sci-libs/libigl: drop 2.3.0Andreas Sturmlechner2023-01-262-52/+0
| | | | | Bug: https://bugs.gentoo.org/888525 Signed-off-by: Andreas Sturmlechner <asturm@gentoo.org>
* sci-libs/geos: fix build w/ gcc 13Sam James2023-01-262-1/+116
| | | | Signed-off-by: Sam James <sam@gentoo.org>
* sci-libs/vtk: drop native CUDA archBernd Waibel2023-01-233-6/+50
| | | | | | | | | | Backport from 9.2.5, until detection is fixed upstream, don't allow the use of VTK_CUDA_ARCH=native. Bug: https://bugs.gentoo.org/835659 Signed-off-by: Bernd Waibel <waebbl-gentoo@posteo.net> Closes: https://github.com/gentoo/gentoo/pull/29200 Signed-off-by: Andrew Ammerlaan <andrewammerlaan@gentoo.org>
* sci-libs/vtk: add 9.2.5Bernd Waibel2023-01-232-0/+749
| | | | | | | | | | | | | | - Add Python 3.11 support. - Simplifiy test logic. The VTK_FORBID_DOWNLOADS option now also works when testing is enabled, if all data files are downloaded and regenerated before testing. - Drop native CUDA arch as long as detection isn't fixed upstream. Bug: https://gitlab.kitware.com/vtk/vtk-m/issues/693 Bug: https://bugs.gentoo.org/835659 Closes: https://bugs.gentoo.org/890269 Signed-off-by: Bernd Waibel <waebbl-gentoo@posteo.net> Signed-off-by: Andrew Ammerlaan <andrewammerlaan@gentoo.org>
* sci-libs/pdal: bump 2.5.0Thomas Bettler2023-01-203-0/+156
| | | | | | Closes: https://github.com/gentoo/gentoo/pull/29173 Signed-off-by: Thomas Bettler <thomas.bettler@gmail.com> Signed-off-by: Sam James <sam@gentoo.org>
* sci-libs/libcmatrix: Remove last-rited pkgMichał Górny2023-01-1911-497/+0
| | | | Signed-off-by: Michał Górny <mgorny@gentoo.org>
* sci-libs/brial: add 1.2.12François Bissey2023-01-162-0/+37
| | | | | | | Closes: https://github.com/gentoo/gentoo/pull/29111 Closes: https://bugs.gentoo.org/890425 Signed-off-by: Michael Orlitzky <mjo@gentoo.org> Signed-off-by: François Bissey <frp.bissey@gmail.com>
* sci-libs/fplll: add 5.4.4François Bissey2023-01-162-0/+30
| | | | | | Closes: https://github.com/gentoo/gentoo/pull/29113 Signed-off-by: Michael Orlitzky <mjo@gentoo.org> Signed-off-by: François Bissey <frp.bissey@gmail.com>
* */*: remove py3.8 from PYTHON_COMPATDavid Seifert2023-01-1454-103/+103
| | | | Signed-off-by: David Seifert <soap@gentoo.org>
* sci-libs/inchi: Stabilize 1.06-r1 ppc, #883913Arthur Zamarin2023-01-131-2/+2
| | | | Signed-off-by: Arthur Zamarin <arthurzam@gentoo.org>