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authorOlivier Fisette <ribosome@gentoo.org>2005-08-06 19:06:54 +0000
committerOlivier Fisette <ribosome@gentoo.org>2005-08-06 19:06:54 +0000
commit7b487fdcd89037c43ef5232559926d5e337b22b3 (patch)
tree8311819b4aeb638f6a12cc2aec40369bbc8eae04
parentNew version: 19.7. Added 19.6 to x86. Removed old version: 18.45. (diff)
downloadgentoo-2-7b487fdcd89037c43ef5232559926d5e337b22b3.tar.gz
gentoo-2-7b487fdcd89037c43ef5232559926d5e337b22b3.tar.bz2
gentoo-2-7b487fdcd89037c43ef5232559926d5e337b22b3.zip
New version: 508. Added 507 to x86.
(Portage version: 2.0.51.22-r2)
-rw-r--r--sci-biology/rebase/ChangeLog8
-rw-r--r--sci-biology/rebase/Manifest2
-rw-r--r--sci-biology/rebase/files/digest-rebase-5081
-rw-r--r--sci-biology/rebase/rebase-507.ebuild4
-rw-r--r--sci-biology/rebase/rebase-508.ebuild39
5 files changed, 51 insertions, 3 deletions
diff --git a/sci-biology/rebase/ChangeLog b/sci-biology/rebase/ChangeLog
index ff0da60f4202..2117eeb32db4 100644
--- a/sci-biology/rebase/ChangeLog
+++ b/sci-biology/rebase/ChangeLog
@@ -1,6 +1,12 @@
# ChangeLog for sci-biology/rebase
# Copyright 2000-2005 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/rebase/ChangeLog,v 1.25 2005/07/09 07:14:46 corsair Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/rebase/ChangeLog,v 1.26 2005/08/06 19:06:54 ribosome Exp $
+
+*rebase-508 (06 Aug 2005)
+
+ 06 Aug 2005; Olivier Fisette <ribosome@gentoo.org> rebase-507.ebuild,
+ +rebase-508.ebuild:
+ New version: 508. Added 507 to x86.
09 Jul 2005; Markus Rothe <corsair@gentoo.org> rebase-506.ebuild:
Stable on ppc64
diff --git a/sci-biology/rebase/Manifest b/sci-biology/rebase/Manifest
index 5884d4d62f57..271c694bcbcf 100644
--- a/sci-biology/rebase/Manifest
+++ b/sci-biology/rebase/Manifest
@@ -1,4 +1,5 @@
MD5 851e7b32b373ce97016bb5cd9d0269be rebase-506.ebuild 1101
+MD5 69409c4086f472430ea96891737e833a rebase-508.ebuild 1105
MD5 5fa95c2f2ad17343c0eb4b6ca755f356 rebase-503.ebuild 1093
MD5 3b10133e907390c0f7af6f22e50c3582 rebase-505.ebuild 1100
MD5 69409c4086f472430ea96891737e833a rebase-507.ebuild 1105
@@ -10,3 +11,4 @@ MD5 d6f28d28944c2a7a89f538b5e2f6ca59 files/digest-rebase-504 63
MD5 ea8e6db2f49c76188695eded7e22ea33 files/digest-rebase-505 63
MD5 9db4b0bbf4fd2bfaf23f3434ac71e8f5 files/digest-rebase-506 63
MD5 50cb82dc8445892e84b0858103dbbc74 files/digest-rebase-507 63
+MD5 a0725a8e8d46017dbfaec45568377efa files/digest-rebase-508 63
diff --git a/sci-biology/rebase/files/digest-rebase-508 b/sci-biology/rebase/files/digest-rebase-508
new file mode 100644
index 000000000000..600af8600f1f
--- /dev/null
+++ b/sci-biology/rebase/files/digest-rebase-508
@@ -0,0 +1 @@
+MD5 195071267b6a73bea78717f9b788190c rebase-508.tar.bz2 179937
diff --git a/sci-biology/rebase/rebase-507.ebuild b/sci-biology/rebase/rebase-507.ebuild
index fb6319348319..89e60a6d7b14 100644
--- a/sci-biology/rebase/rebase-507.ebuild
+++ b/sci-biology/rebase/rebase-507.ebuild
@@ -1,6 +1,6 @@
# Copyright 1999-2005 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/rebase/rebase-507.ebuild,v 1.1 2005/07/08 01:42:33 ribosome Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/rebase/rebase-507.ebuild,v 1.2 2005/08/06 19:06:54 ribosome Exp $
DESCRIPTION="A restriction enzyme database"
HOMEPAGE="http://rebase.neb.com"
@@ -8,7 +8,7 @@ SRC_URI="mirror://gentoo/${P}.tar.bz2"
LICENSE="public-domain"
SLOT="0"
-KEYWORDS="~x86 ~ppc ~amd64 ~ppc-macos ~ppc64"
+KEYWORDS="x86 ~ppc ~amd64 ~ppc-macos ~ppc64"
IUSE="emboss minimal"
# Minimal build keeps only the indexed files (if applicable) and the documentation.
# The non-indexed database is not installed.
diff --git a/sci-biology/rebase/rebase-508.ebuild b/sci-biology/rebase/rebase-508.ebuild
new file mode 100644
index 000000000000..b5b43ce1e4af
--- /dev/null
+++ b/sci-biology/rebase/rebase-508.ebuild
@@ -0,0 +1,39 @@
+# Copyright 1999-2005 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/rebase/rebase-508.ebuild,v 1.1 2005/08/06 19:06:54 ribosome Exp $
+
+DESCRIPTION="A restriction enzyme database"
+HOMEPAGE="http://rebase.neb.com"
+SRC_URI="mirror://gentoo/${P}.tar.bz2"
+LICENSE="public-domain"
+
+SLOT="0"
+KEYWORDS="~x86 ~ppc ~amd64 ~ppc-macos ~ppc64"
+IUSE="emboss minimal"
+# Minimal build keeps only the indexed files (if applicable) and the documentation.
+# The non-indexed database is not installed.
+
+DEPEND="emboss? ( sci-biology/emboss )"
+
+src_compile() {
+ if use emboss; then
+ echo
+ einfo "Indexing ${PN} for usage with EMBOSS."
+ mkdir REBASE
+ EMBOSS_DATA=. rebaseextract -auto -infile withrefm.${PV} \
+ -protofile proto.${PV} || die "Indexing ${PN} failed."
+ echo
+ fi
+}
+
+src_install() {
+ if ! use minimal; then
+ insinto /usr/share/${PN}
+ doins withrefm.${PV} proto.${PV}
+ fi
+ newdoc REBASE.DOC README
+ if use emboss; then
+ insinto /usr/share/EMBOSS/data/REBASE
+ doins REBASE/{embossre.enz,embossre.ref,embossre.sup}
+ fi
+}