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| author |   Justin Lecher <jlec@gentoo.org> | 2011-04-28 15:01:05 +0000 |
|---|---|---|
| committer | Justin Lecher <jlec@gentoo.org> | 2011-04-28 15:01:05 +0000 |
| commit | 75fbde332ef5216ccac2d3097417692047117690 (patch) | |
| tree | df21a28b663ea9fd4dee09fd934eee10ac4f6b8a /sci-biology/abyss/abyss-1.2.7.ebuild | |
| parent | version bump (diff) | |
| download | gentoo-2-75fbde332ef5216ccac2d3097417692047117690.tar.gz gentoo-2-75fbde332ef5216ccac2d3097417692047117690.tar.bz2 gentoo-2-75fbde332ef5216ccac2d3097417692047117690.zip | |
Added openmp USE
(Portage version: 2.2.0_alpha30/cvs/Linux x86_64)
Diffstat (limited to 'sci-biology/abyss/abyss-1.2.7.ebuild')
| -rw-r--r-- | sci-biology/abyss/abyss-1.2.7.ebuild | 22 |
1 files changed, 13 insertions, 9 deletions
diff --git a/sci-biology/abyss/abyss-1.2.7.ebuild b/sci-biology/abyss/abyss-1.2.7.ebuild index 95f18eb1550b..2bfafaaab3a9 100644 --- a/sci-biology/abyss/abyss-1.2.7.ebuild +++ b/sci-biology/abyss/abyss-1.2.7.ebuild @@ -1,26 +1,25 @@ # Copyright 1999-2011 Gentoo Foundation # Distributed under the terms of the GNU General Public License v2 -# $Header: /var/cvsroot/gentoo-x86/sci-biology/abyss/abyss-1.2.7.ebuild,v 1.1 2011/04/28 14:04:23 xarthisius Exp $ +# $Header: /var/cvsroot/gentoo-x86/sci-biology/abyss/abyss-1.2.7.ebuild,v 1.2 2011/04/28 15:01:05 jlec Exp $ -EAPI="2" +EAPI="4" -inherit autotools base +inherit autotools DESCRIPTION="Assembly By Short Sequences - a de novo, parallel, paired-end sequence assembler" -HOMEPAGE="http://www.bcgsc.ca/platform/bioinfo/software/abyss" +HOMEPAGE="http://www.bcgsc.ca/platform/bioinfo/software/abyss/" SRC_URI="http://www.bcgsc.ca/downloads/abyss/${P}.tar.gz" LICENSE="abyss" SLOT="0" -IUSE="+mpi" -KEYWORDS="~amd64 ~x86" +IUSE="+mpi openmp" +KEYWORDS="amd64 x86" -DEPEND="dev-cpp/sparsehash +DEPEND=" + dev-cpp/sparsehash mpi? ( virtual/mpi )" RDEPEND="${DEPEND}" -DOCS=( ChangeLog README ) - # todo: --enable-maxk=N configure option # todo: fix automagic mpi toggling @@ -29,3 +28,8 @@ src_prepare() { sed -i -e "/dist_pkgdoc_DATA/d" Makefile.am || die eautoreconf } + +src_configure() { + econf \ + $(use_enable openmp) +} |