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| author |   Justin Lecher <jlec@gentoo.org> | 2013-02-17 10:28:37 +0000 |
|---|---|---|
| committer | Justin Lecher <jlec@gentoo.org> | 2013-02-17 10:28:37 +0000 |
| commit | a84be574a5f2c655e9248d3d689f3c6d26416224 (patch) | |
| tree | 86f4f581e6bfa4a04547c3898164ec6c869a56a0 /sci-biology/phrap | |
| parent | sci-biology/consed: Quote EPREFIX, thanks Martin Mokrejš for the patch (diff) | |
| download | gentoo-2-a84be574a5f2c655e9248d3d689f3c6d26416224.tar.gz gentoo-2-a84be574a5f2c655e9248d3d689f3c6d26416224.tar.bz2 gentoo-2-a84be574a5f2c655e9248d3d689f3c6d26416224.zip | |
sci-biology/phrap: Add missing deps, thanks Martin Mokrejš for the patch
(Portage version: 2.2.0_alpha163/cvs/Linux x86_64, signed Manifest commit with key 8009D6F070EB7916)
Diffstat (limited to 'sci-biology/phrap')
| -rw-r--r-- | sci-biology/phrap/ChangeLog | 8 | ||||
| -rw-r--r-- | sci-biology/phrap/metadata.xml | 10 | ||||
| -rw-r--r-- | sci-biology/phrap/phrap-1.080812.ebuild | 11 |
3 files changed, 19 insertions, 10 deletions
diff --git a/sci-biology/phrap/ChangeLog b/sci-biology/phrap/ChangeLog index 611942cb2297..8d7209f3c9c9 100644 --- a/sci-biology/phrap/ChangeLog +++ b/sci-biology/phrap/ChangeLog @@ -1,6 +1,10 @@ # ChangeLog for sci-biology/phrap -# Copyright 1999-2008 Gentoo Foundation; Distributed under the GPL v2 -# $Header: /var/cvsroot/gentoo-x86/sci-biology/phrap/ChangeLog,v 1.1 2008/12/31 00:28:51 weaver Exp $ +# Copyright 1999-2013 Gentoo Foundation; Distributed under the GPL v2 +# $Header: /var/cvsroot/gentoo-x86/sci-biology/phrap/ChangeLog,v 1.2 2013/02/17 10:28:37 jlec Exp $ + + 17 Feb 2013; Justin Lecher <jlec@gentoo.org> phrap-1.080812.ebuild, + metadata.xml: + Add missing deps, thanks Martin Mokrejš for the patch *phrap-1.080812 (31 Dec 2008) diff --git a/sci-biology/phrap/metadata.xml b/sci-biology/phrap/metadata.xml index 3302123e5718..fc7c76942a10 100644 --- a/sci-biology/phrap/metadata.xml +++ b/sci-biology/phrap/metadata.xml @@ -1,9 +1,9 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer> - <email>weaver@gentoo.org</email> - <name>Andrey Kislyuk</name> - </maintainer> - <herd>sci-biology</herd> + <maintainer> + <email>weaver@gentoo.org</email> + <name>Andrey Kislyuk</name> + </maintainer> + <herd>sci-biology</herd> </pkgmetadata> diff --git a/sci-biology/phrap/phrap-1.080812.ebuild b/sci-biology/phrap/phrap-1.080812.ebuild index 56a9092d293c..666e423e2541 100644 --- a/sci-biology/phrap/phrap-1.080812.ebuild +++ b/sci-biology/phrap/phrap-1.080812.ebuild @@ -1,6 +1,6 @@ -# Copyright 1999-2008 Gentoo Foundation +# Copyright 1999-2013 Gentoo Foundation # Distributed under the terms of the GNU General Public License v2 -# $Header: /var/cvsroot/gentoo-x86/sci-biology/phrap/phrap-1.080812.ebuild,v 1.3 2008/12/31 01:09:25 weaver Exp $ +# $Header: /var/cvsroot/gentoo-x86/sci-biology/phrap/phrap-1.080812.ebuild,v 1.4 2013/02/17 10:28:37 jlec Exp $ DESCRIPTION="Phrap, swat, cross_match: Shotgun assembly and alignment utilities" HOMEPAGE="http://www.phrap.org/" @@ -12,7 +12,8 @@ KEYWORDS="~amd64 ~x86" IUSE="" DEPEND="" -RDEPEND="" +RDEPEND="dev-lang/perl + dev-perl/perl-tk" S="${WORKDIR}" @@ -28,6 +29,10 @@ src_compile() { sed -i 's/CFLAGS=/#CFLAGS=/' makefile sed -i 's|#!/usr/local/bin/perl|#!/usr/bin/env perl|' phrapview emake || die "emake failed" + # TODO: we need to extract staden sources because for compilation some of those + # files are needed: http://www.phrap.org/phredphrap/phrap.html + # (look for gcphrap and other gc* programs) + # emake gcphrap || die } src_install() { |