diff options
| author |   Justin Lecher <jlec@gentoo.org> | 2013-02-18 07:33:31 +0000 |
|---|---|---|
| committer | Justin Lecher <jlec@gentoo.org> | 2013-02-18 07:33:31 +0000 |
| commit | 340bf581beb0a3914dc974ad825e8115a68ccc8d (patch) | |
| tree | 933fa94fdbc1b5dab514a73017785c550c793857 /sci-biology/phyml | |
| parent | sci-biology/sibsim4: Drop Old (diff) | |
| download | gentoo-2-340bf581beb0a3914dc974ad825e8115a68ccc8d.tar.gz gentoo-2-340bf581beb0a3914dc974ad825e8115a68ccc8d.tar.bz2 gentoo-2-340bf581beb0a3914dc974ad825e8115a68ccc8d.zip | |
sci-biology/phyml: Drop Old
(Portage version: 2.2.0_alpha162/cvs/Linux x86_64, signed Manifest commit with key 70EB7916)
Diffstat (limited to 'sci-biology/phyml')
| -rw-r--r-- | sci-biology/phyml/ChangeLog | 6 | ||||
| -rw-r--r-- | sci-biology/phyml/metadata.xml | 4 | ||||
| -rw-r--r-- | sci-biology/phyml/phyml-2.4.5.ebuild | 31 |
3 files changed, 7 insertions, 34 deletions
diff --git a/sci-biology/phyml/ChangeLog b/sci-biology/phyml/ChangeLog index 2ab66a805f16..d8759a791223 100644 --- a/sci-biology/phyml/ChangeLog +++ b/sci-biology/phyml/ChangeLog @@ -1,6 +1,10 @@ # ChangeLog for sci-biology/phyml # Copyright 1999-2013 Gentoo Foundation; Distributed under the GPL v2 -# $Header: /var/cvsroot/gentoo-x86/sci-biology/phyml/ChangeLog,v 1.9 2013/02/17 18:42:55 ago Exp $ +# $Header: /var/cvsroot/gentoo-x86/sci-biology/phyml/ChangeLog,v 1.10 2013/02/18 07:33:31 jlec Exp $ + + 18 Feb 2013; Justin Lecher <jlec@gentoo.org> -phyml-2.4.5.ebuild, + metadata.xml: + Drop Old 17 Feb 2013; Agostino Sarubbo <ago@gentoo.org> phyml-2.4.5-r2.ebuild: Stable for x86, wrt bug #328425 diff --git a/sci-biology/phyml/metadata.xml b/sci-biology/phyml/metadata.xml index ba1479ccd999..d0355f85e406 100644 --- a/sci-biology/phyml/metadata.xml +++ b/sci-biology/phyml/metadata.xml @@ -1,8 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> - <longdescription lang="en"> + <herd>sci-biology</herd> + <longdescription lang="en"> Phyml is a simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood. Given input sequence files, it estimates phylogenies using maximum likelihood, and is capable of diff --git a/sci-biology/phyml/phyml-2.4.5.ebuild b/sci-biology/phyml/phyml-2.4.5.ebuild deleted file mode 100644 index 929df30fb96b..000000000000 --- a/sci-biology/phyml/phyml-2.4.5.ebuild +++ /dev/null @@ -1,31 +0,0 @@ -# Copyright 1999-2010 Gentoo Foundation -# Distributed under the terms of the GNU General Public License v2 -# $Header: /var/cvsroot/gentoo-x86/sci-biology/phyml/phyml-2.4.5.ebuild,v 1.3 2010/10/22 15:44:40 xarthisius Exp $ - -DESCRIPTION="A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood." -HOMEPAGE="http://atgc.lirmm.fr/phyml/" -SRC_URI="http://www.lirmm.fr/~guindon/${PN}_v${PV}.tar.gz" - -LICENSE="GPL-2" -SLOT="0" -KEYWORDS="amd64 x86" -IUSE="" - -DEPEND="" -RDEPEND="" - -S=${WORKDIR}/${PN}_v${PV} - -src_unpack() { - unpack ${A} - cd "${S}" - sed -i -e 's/^hello !!!//' -e 's/^CFLAGS =/#CFLAGS =/' -e 's/^CC =/#CC =/' Makefile -} - -src_compile() { - make -} - -src_install() { - dobin phyml -} |