diff options
author | Andrey Kislyuk <weaver@gentoo.org> | 2009-09-04 17:22:15 +0000 |
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committer | Andrey Kislyuk <weaver@gentoo.org> | 2009-09-04 17:22:15 +0000 |
commit | 11f1a6d8ce9f6e7ae9b9537a1fc51e973bc78808 (patch) | |
tree | f4a35f8e85de489b29e338dd4c4afb91d42faf14 /sci-biology | |
parent | amd64 stable, security bug 283624. (diff) | |
download | gentoo-2-11f1a6d8ce9f6e7ae9b9537a1fc51e973bc78808.tar.gz gentoo-2-11f1a6d8ce9f6e7ae9b9537a1fc51e973bc78808.tar.bz2 gentoo-2-11f1a6d8ce9f6e7ae9b9537a1fc51e973bc78808.zip |
Version bump, clean up, fix bug 248338, take maintainership
(Portage version: 2.2_rc30/cvs/Linux x86_64)
Diffstat (limited to 'sci-biology')
-rw-r--r-- | sci-biology/njplot/ChangeLog | 10 | ||||
-rw-r--r-- | sci-biology/njplot/metadata.xml | 4 | ||||
-rw-r--r-- | sci-biology/njplot/njplot-2.3.ebuild | 33 | ||||
-rw-r--r-- | sci-biology/njplot/njplot-20050109.ebuild | 35 |
4 files changed, 45 insertions, 37 deletions
diff --git a/sci-biology/njplot/ChangeLog b/sci-biology/njplot/ChangeLog index dc070cfb64bd..f9d828aa1e6c 100644 --- a/sci-biology/njplot/ChangeLog +++ b/sci-biology/njplot/ChangeLog @@ -1,6 +1,12 @@ # ChangeLog for sci-biology/njplot -# Copyright 1999-2007 Gentoo Foundation; Distributed under the GPL v2 -# $Header: /var/cvsroot/gentoo-x86/sci-biology/njplot/ChangeLog,v 1.9 2007/07/22 07:30:55 dberkholz Exp $ +# Copyright 1999-2009 Gentoo Foundation; Distributed under the GPL v2 +# $Header: /var/cvsroot/gentoo-x86/sci-biology/njplot/ChangeLog,v 1.10 2009/09/04 17:22:15 weaver Exp $ + +*njplot-2.3 (04 Sep 2009) + + 04 Sep 2009; Andrey Kislyuk <weaver@gentoo.org> metadata.xml, + +njplot-2.3.ebuild, -njplot-20050109.ebuild: + Version bump, clean up, fix bug 248338, take maintainership 22 Jul 2007; Donnie Berkholz <dberkholz@gentoo.org>; njplot-20050109.ebuild: diff --git a/sci-biology/njplot/metadata.xml b/sci-biology/njplot/metadata.xml index 7fdc0274cfac..e522a3428e3c 100644 --- a/sci-biology/njplot/metadata.xml +++ b/sci-biology/njplot/metadata.xml @@ -1,6 +1,10 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> + <maintainer> + <email>weaver@gentoo.org</email> + <name>Andrey Kislyuk</name> + </maintainer> <herd>sci-biology</herd> <longdescription> NJplot is a tree drawing program able to draw any phylogenetic tree diff --git a/sci-biology/njplot/njplot-2.3.ebuild b/sci-biology/njplot/njplot-2.3.ebuild new file mode 100644 index 000000000000..147592cd5c05 --- /dev/null +++ b/sci-biology/njplot/njplot-2.3.ebuild @@ -0,0 +1,33 @@ +# Copyright 1999-2009 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 +# $Header: /var/cvsroot/gentoo-x86/sci-biology/njplot/njplot-2.3.ebuild,v 1.1 2009/09/04 17:22:15 weaver Exp $ + +EAPI="2" + +inherit toolchain-funcs + +DESCRIPTION="A phylogenetic tree drawing program which supports tree rooting" +HOMEPAGE="http://pbil.univ-lyon1.fr/software/njplot.html" +SRC_URI="ftp://pbil.univ-lyon1.fr/pub/mol_phylogeny/njplot/archive/njplot-${PV}.tar.gz" +LICENSE="public-domain" + +SLOT="0" +KEYWORDS="~amd64 ~x86" +IUSE="" + +RDEPEND="x11-libs/libXmu" +DEPEND="sci-biology/ncbi-tools[X] + ${RDEPEND}" + +src_prepare() { + sed -i -e 's|/banques0/ncbiJun04|/usr/include/ncbi|' \ + -e 's/CC = gcc/CC='$(tc-getCC)'/' -e 's/CFLAGS =/CFLAGS +=/' \ + makefile || die + sed -i -e "s%njplot.help%/usr/share/doc/${PF}/njplot.help%" njplot-vib.c || die +} + +src_install() { + dobin newicktops newicktotxt njplot unrooted || die + doman *.1 || die + dodoc README njplot.help +} diff --git a/sci-biology/njplot/njplot-20050109.ebuild b/sci-biology/njplot/njplot-20050109.ebuild deleted file mode 100644 index feb35f9c5e2e..000000000000 --- a/sci-biology/njplot/njplot-20050109.ebuild +++ /dev/null @@ -1,35 +0,0 @@ -# Copyright 1999-2007 Gentoo Foundation -# Distributed under the terms of the GNU General Public License v2 -# $Header: /var/cvsroot/gentoo-x86/sci-biology/njplot/njplot-20050109.ebuild,v 1.5 2007/07/22 07:30:55 dberkholz Exp $ - -DESCRIPTION="A phylogenetic tree drawing program which supports tree rooting" -HOMEPAGE="http://pbil.univ-lyon1.fr/software/njplot.html" -SRC_URI="mirror://gentoo/${P}.tar.bz2" -LICENSE="public-domain" - -SLOT="0" -KEYWORDS="x86" -IUSE="" - -RDEPEND="x11-libs/libXmu" - -DEPEND="sci-biology/ncbi-tools - ${RDEPEND}" - -src_unpack() { - unpack ${A} - cd ${S} - sed -i -e "s%njplot.help%/usr/share/doc/${PF}/njplot.help%" njplot-vib.c || die -} - -src_compile() { - make all -e || die -} - -src_install() { - dobin add_root newicktops newicktotxt njplot unrooted - insinto /usr/share/doc/${PF} - doins njplot.help - insinto /usr/share/${PN} - doins test.ph -} |