summaryrefslogtreecommitdiff
diff options
context:
space:
mode:
authorJustin Lecher <jlec@gentoo.org>2014-04-26 15:39:43 +0000
committerJustin Lecher <jlec@gentoo.org>2014-04-26 15:39:43 +0000
commitf3184dc4485cd92f2d8f40509f9cea1693bc37a2 (patch)
tree3567e9ad27b79dd960dfede896d087c92c5df6b1 /sci-chemistry
parenttake out white space (diff)
downloadgentoo-2-f3184dc4485cd92f2d8f40509f9cea1693bc37a2.tar.gz
gentoo-2-f3184dc4485cd92f2d8f40509f9cea1693bc37a2.tar.bz2
gentoo-2-f3184dc4485cd92f2d8f40509f9cea1693bc37a2.zip
sci-chemistry/aria: Drop old, #508740
(Portage version: 2.2.10/cvs/Linux x86_64, signed Manifest commit with key B9D4F231BD1558AB!)
Diffstat (limited to 'sci-chemistry')
-rw-r--r--sci-chemistry/aria/ChangeLog5
-rw-r--r--sci-chemistry/aria/aria-2.3.2-r3.ebuild94
2 files changed, 4 insertions, 95 deletions
diff --git a/sci-chemistry/aria/ChangeLog b/sci-chemistry/aria/ChangeLog
index 69e256d1ac41..8de920044ccc 100644
--- a/sci-chemistry/aria/ChangeLog
+++ b/sci-chemistry/aria/ChangeLog
@@ -1,6 +1,9 @@
# ChangeLog for sci-chemistry/aria
# Copyright 1999-2014 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/aria/ChangeLog,v 1.23 2014/01/06 15:27:03 jlec Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/aria/ChangeLog,v 1.24 2014/04/26 15:39:43 jlec Exp $
+
+ 26 Apr 2014; Justin Lecher <jlec@gentoo.org> -aria-2.3.2-r3.ebuild:
+ Drop old, #508740
06 Jan 2014; Justin Lecher <jlec@gentoo.org> aria-2.3.2-r3.ebuild:
Punt base.eclass
diff --git a/sci-chemistry/aria/aria-2.3.2-r3.ebuild b/sci-chemistry/aria/aria-2.3.2-r3.ebuild
deleted file mode 100644
index c7abe0539f92..000000000000
--- a/sci-chemistry/aria/aria-2.3.2-r3.ebuild
+++ /dev/null
@@ -1,94 +0,0 @@
-# Copyright 1999-2014 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/aria/aria-2.3.2-r3.ebuild,v 1.4 2014/01/06 15:27:03 jlec Exp $
-
-EAPI=3
-
-PYTHON_DEPEND="2"
-PYTHON_USE_WITH="tk"
-
-inherit eutils python versionator
-
-MY_P="${PN}$(get_version_component_range 1-2 ${PV})"
-
-DESCRIPTION="Automated NOE assignment and NMR structure calculation"
-HOMEPAGE="http://aria.pasteur.fr/"
-SRC_URI="http://aria.pasteur.fr/archives/${MY_P}.2.tar.gz"
-
-SLOT="0"
-LICENSE="cns"
-KEYWORDS="amd64 x86 ~amd64-linux ~x86-linux"
-IUSE="examples"
-
-RDEPEND="
- sci-chemistry/clashlist
- sci-chemistry/procheck
- sci-libs/clashscore-db
- dev-python/numpy
- dev-python/matplotlib[tk]
- >=sci-chemistry/cns-1.2.1-r7[aria,openmp]
- >=dev-lang/tk-8.3
- >=sci-chemistry/ccpn-2.0.5
- >=dev-tcltk/tix-8.1.4"
-DEPEND="${RDEPEND}"
-
-RESTRICT="fetch"
-
-S="${WORKDIR}/${MY_P}"
-
-pkg_nofetch(){
- einfo "Go to ${HOMEPAGE}, download ${A}"
- einfo "and place it in ${DISTDIR}"
-}
-
-src_prepare() {
- epatch \
- "${FILESDIR}"/${P}-python.patch \
- "${FILESDIR}"/${P}-through-space-2.patch
-}
-
-src_test(){
- export CCPNMR_TOP_DIR="${EPREFIX}"/$(python_get_sitedir)
- export PYTHONPATH=.:${CCPNMR_TOP_DIR}/ccpn/python
- $(PYTHON) check.py || die
-}
-
-src_install(){
- insinto "$(python_get_sitedir)/${PN}"
- doins -r src aria2.py || die "failed to install ${PN}"
- insinto "$(python_get_sitedir)/${PN}"/cns
- doins -r cns/{protocols,toppar,src/helplib} || die "failed to install cns part"
-
- if use examples; then
- insinto /usr/share/${P}/
- doins -r examples || die
- fi
-
- # ENV
- cat >> "${T}"/20aria <<- EOF
- ARIA2="${EPREFIX}/$(python_get_sitedir)/${PN}"
- EOF
-
- doenvd "${T}"/20aria
-
- # Launch Wrapper
- cat >> "${T}"/aria <<- EOF
- #!/bin/sh
- export CCPNMR_TOP_DIR="${EPREFIX}/$(python_get_sitedir)"
- export PYTHONPATH="${EPREFIX}/$(python_get_sitedir)/ccpn/python"
- exec "$(PYTHON)" -O "\${ARIA2}"/aria2.py \$@
- EOF
-
- dobin "${T}"/aria || die "failed to install wrapper"
- dosym aria /usr/bin/aria2
-
- dodoc README || die
-}
-
-pkg_postinst() {
- python_mod_optimize ${PN}
-}
-
-pkg_postrm() {
- python_mod_cleanup ${PN}
-}