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| author |   Justin Lecher <jlec@gentoo.org> | 2014-09-20 19:06:01 +0000 |
|---|---|---|
| committer | Justin Lecher <jlec@gentoo.org> | 2014-09-20 19:06:01 +0000 |
| commit | 93a6151db48e3992d66c9709f81bd07e14c48b7e (patch) | |
| tree | 376dcf649dc045e81276d75f2869034dab1826d4 /sci-libs | |
| parent | Version bump. (diff) | |
| download | gentoo-2-93a6151db48e3992d66c9709f81bd07e14c48b7e.tar.gz gentoo-2-93a6151db48e3992d66c9709f81bd07e14c48b7e.tar.bz2 gentoo-2-93a6151db48e3992d66c9709f81bd07e14c48b7e.zip | |
sci-libs/htslib: New addition, written by me
(Portage version: 2.2.13/cvs/Linux x86_64, signed Manifest commit with key B9D4F231BD1558AB!)
Diffstat (limited to 'sci-libs')
| -rw-r--r-- | sci-libs/htslib/ChangeLog | 10 | ||||
| -rw-r--r-- | sci-libs/htslib/Manifest | 4 | ||||
| -rw-r--r-- | sci-libs/htslib/htslib-1.0.ebuild | 35 | ||||
| -rw-r--r-- | sci-libs/htslib/metadata.xml | 5 |
4 files changed, 54 insertions, 0 deletions
diff --git a/sci-libs/htslib/ChangeLog b/sci-libs/htslib/ChangeLog new file mode 100644 index 000000000000..8951a9c3af0f --- /dev/null +++ b/sci-libs/htslib/ChangeLog @@ -0,0 +1,10 @@ +# ChangeLog for sci-libs/htslib +# Copyright 1999-2014 Gentoo Foundation; Distributed under the GPL v2 +# $Header: /var/cvsroot/gentoo-x86/sci-libs/htslib/ChangeLog,v 1.1 2014/09/20 19:06:01 jlec Exp $ + +*htslib-1.0 (20 Sep 2014) + + 20 Sep 2014; Justin Lecher <jlec@gentoo.org> +htslib-1.0.ebuild, + +metadata.xml: + New addition, written by me + diff --git a/sci-libs/htslib/Manifest b/sci-libs/htslib/Manifest new file mode 100644 index 000000000000..202990ad80ea --- /dev/null +++ b/sci-libs/htslib/Manifest @@ -0,0 +1,4 @@ +DIST htslib-1.0.tar.bz2 842174 SHA256 3d53fb081fafd930cadfee6f950faacc1993a0f4a9fa329fc897865fc6b331bc SHA512 aee7080a31c3fe5bd1fe4a16102da4aef7d415fd022781c1a5bdc1316ca50f8fcabbb95a39adc867e4eb5ac2d8ed63ab15ceafcd768e840d2593282916313507 WHIRLPOOL 512f4a95e98129151fef34fb90294138bc0aec40d5c2345d15d49ded02810c4663b8ff65726ced9f0d9ceb300295da066f6025d2b1966224937fc9ff58f2b58f +EBUILD htslib-1.0.ebuild 683 SHA256 4c18f49df4cec207f1a87c4441906bded31e46291ae2b0440c46af120b980139 SHA512 480b7ddc7d2f4d7fe3bbb7d25e94636c5e410c08c6f85fea039d9a185776067e64e6fc624b12ad9a8f78b15d8c3b169ffbddf486fbe0fe0d11c4d7cf3487183b WHIRLPOOL fb4647462aa17fe35e0b0fbfbd976c7bfa76d54430e595f7f2e6ac2d91747b61e143e1f3e4adabf9fb094ff11642b14d8bf38ffb0eb977e86fa43c6eec8d05a9 +MISC ChangeLog 258 SHA256 fe76daef45cceeaf799407b5035c6a14d78c796bb53451a545730db04850e5f8 SHA512 0e077a6de9a9978f55e0d4cdad92d02a61b972ca230c0148fc7c8d92d4ae653bae190cce297c3adc191307140146df06bd899d8f3c7559a2a447534a9a84e375 WHIRLPOOL 0e1dec941a84844e67e28bcd084ba7ef5a669daef93a380aaaf416fb73a8e417af4cd07d36b08c0a47d76834e83a14396c02e8fc0a0942e44a7dd5edeea530d9 +MISC metadata.xml 166 SHA256 29b228f683c71345323d841414e410c929a320f34536eb30910498728260c8ac SHA512 51c5345bb1c4466b73e2feac8895c64fc119365e7f2c156702f4c93664d3aba028b3da9daaabf24f61a88220345fca7806771a252e8ae906cac5dec97862c7e0 WHIRLPOOL 211bf955d94fc1d93b12388a2c597a8d440fb5d78f84d59b2549569537098c3525b1fbab707441d62fabe20edcac2fd9ebe09c5d9870f1c9558d7ee90d5db5b3 diff --git a/sci-libs/htslib/htslib-1.0.ebuild b/sci-libs/htslib/htslib-1.0.ebuild new file mode 100644 index 000000000000..d0e5336b56b5 --- /dev/null +++ b/sci-libs/htslib/htslib-1.0.ebuild @@ -0,0 +1,35 @@ +# Copyright 1999-2014 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 +# $Header: /var/cvsroot/gentoo-x86/sci-libs/htslib/htslib-1.0.ebuild,v 1.1 2014/09/20 19:06:01 jlec Exp $ + +EAPI=5 + +inherit multilib toolchain-funcs + +DESCRIPTION="C library for high-throughput sequencing data formats" +HOMEPAGE="http://www.htslib.org/" +SRC_URI="mirror://sourceforge/samtools/${PV}/${P}.tar.bz2" + +SLOT="0" +LICENSE="MIT" +KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux" +IUSE="" + +src_compile() { + emake \ + AR="$(tc-getAR)" \ + CC="$(tc-getCC)" \ + CFLAGS="${CFLAGS}" \ + LDFLAGS="${LDFLAGS}" +} + +src_install() { + emake \ + prefix="${ED}"/usr \ + libdir="${ED}"/usr/$(get_libdir) \ + install + + rm "${ED}/usr/share/man/man1/libhts.so.1" || die + + dodoc README +} diff --git a/sci-libs/htslib/metadata.xml b/sci-libs/htslib/metadata.xml new file mode 100644 index 000000000000..f17a827e3101 --- /dev/null +++ b/sci-libs/htslib/metadata.xml @@ -0,0 +1,5 @@ +<?xml version="1.0" encoding="UTF-8"?> +<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> +<pkgmetadata> + <herd>sci-biology</herd> +</pkgmetadata> |