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path: root/sci-biology/samtools
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* x86 stable wrt bug #525630Mikle Kolyada2015-07-011-19/+9
| | | | (Portage version: 2.2.18/cvs/Linux x86_64, signed Manifest commit with key 0xC42EB5D6)
* x86 stable wrt bug #525630Mikle Kolyada2015-07-012-4/+7
| | | | (Portage version: 2.2.18/cvs/Linux x86_64, signed Manifest commit with key 0xC42EB5D6)
* Updating remote-id in metadata.xmlJustin Lecher2015-06-152-18/+21
| | | | (Portage version: 2.2.20/cvs/Linux x86_64, signed Manifest commit with key E9402A79B03529A2!)
* Drop old Python implementationsMichał Górny2015-04-081-19/+19
| | | | (Portage version: 2.2.18/cvs/Linux x86_64, signed Manifest commit with key EFB4464E!)
* Drop old Python implementationsMichał Górny2015-04-082-4/+7
| | | | (Portage version: 2.2.18/cvs/Linux x86_64, signed Manifest commit with key EFB4464E!)
* Fix TypoJustin Lecher2015-04-071-15/+15
| | | | (Portage version: 2.2.18/cvs/Linux x86_64, signed Manifest commit with key B9D4F231BD1558AB!)
* Fix TypoJustin Lecher2015-04-071-4/+4
| | | | (Portage version: 2.2.18/cvs/Linux x86_64, signed Manifest commit with key B9D4F231BD1558AB!)
* Fix depend rules in make which break due to unbundling of htslib, #541134; ↵Justin Lecher2015-02-281-17/+17
| | | | | | use LD_LIBRARY_PATH druing tests (Portage version: 2.2.17/cvs/Linux x86_64, signed Manifest commit with key B9D4F231BD1558AB!)
* Fix depend rules in make which break due to unbundling of htslib, #541134; ↵Justin Lecher2015-02-283-6/+52
| | | | | | use LD_LIBRARY_PATH druing tests (Portage version: 2.2.17/cvs/Linux x86_64, signed Manifest commit with key B9D4F231BD1558AB!)
* Version Bump, #540356Justin Lecher2015-02-181-15/+18
| | | | (Portage version: 2.2.17/cvs/Linux x86_64, signed Manifest commit with key B9D4F231BD1558AB!)
* Version Bump, #540356Justin Lecher2015-02-183-1/+242
| | | | (Portage version: 2.2.17/cvs/Linux x86_64, signed Manifest commit with key B9D4F231BD1558AB!)
* sci-biology/samtools: Version BUmpJustin Lecher2015-01-061-15/+18
| | | | (Portage version: 2.2.15/cvs/Linux x86_64, signed Manifest commit with key B9D4F231BD1558AB!)
* sci-biology/samtools: Version BUmpJustin Lecher2015-01-063-2/+244
| | | | (Portage version: 2.2.15/cvs/Linux x86_64, signed Manifest commit with key B9D4F231BD1558AB!)
* sci-biology/samtools: Install bam headers and create libbam.so, #523644Justin Lecher2014-09-251-15/+17
| | | | (Portage version: 2.2.13/cvs/Linux x86_64, signed Manifest commit with key B9D4F231BD1558AB!)
* sci-biology/samtools: Install bam headers and create libbam.so, #523644Justin Lecher2014-09-253-1/+139
| | | | (Portage version: 2.2.13/cvs/Linux x86_64, signed Manifest commit with key B9D4F231BD1558AB!)
* sci-biology/samtools: Add missing build dep, #523586Justin Lecher2014-09-241-16/+16
| | | | (Portage version: 2.2.13/cvs/Linux x86_64, signed Manifest commit with key B9D4F231BD1558AB!)
* sci-biology/samtools: Add missing build dep, #523586Justin Lecher2014-09-242-5/+9
| | | | (Portage version: 2.2.13/cvs/Linux x86_64, signed Manifest commit with key B9D4F231BD1558AB!)
* sci-biology/samtools: Version Bump, #523224; drop oldJustin Lecher2014-09-201-6/+26
| | | | (Portage version: 2.2.13/cvs/Linux x86_64, signed Manifest commit with key B9D4F231BD1558AB!)
* sci-biology/samtools: Version Bump, #523224; drop oldJustin Lecher2014-09-206-163/+78
| | | | (Portage version: 2.2.13/cvs/Linux x86_64, signed Manifest commit with key B9D4F231BD1558AB!)
* sci-biology/samtools: Fix symlink creation, thanks Martin Mokrejs telling me ↵Justin Lecher2014-03-231-12/+2
| | | | | | that (Portage version: 2.2.8-r1/cvs/Linux x86_64, signed Manifest commit with key B9D4F231BD1558AB!)
* sci-biology/samtools: Fix symlink creation, thanks Martin Mokrejs telling me ↵Justin Lecher2014-03-232-3/+9
| | | | | | that (Portage version: 2.2.8-r1/cvs/Linux x86_64, signed Manifest commit with key B9D4F231BD1558AB!)
* Reference correct library name on Darwin, thanks Linlin Yan in bug #491812Fabian Groffen2014-02-111-17/+7
| | | | (Portage version: 2.2.8-prefix/cvs/SunOS i386, signed Manifest commit with key 0x5F75F607C5C74E89)
* Reference correct library name on Darwin, thanks Linlin Yan in bug #491812Fabian Groffen2014-02-112-7/+9
| | | | (Portage version: 2.2.8-prefix/cvs/SunOS i386, signed Manifest commit with key 0x5F75F607C5C74E89)
* sci-biology/samtools: Fix underlinkingJustin Lecher2013-12-061-16/+16
| | | | (Portage version: 2.2.7/cvs/Linux x86_64, signed Manifest commit with key B9D4F231BD1558AB!)
* sci-biology/samtools: Fix underlinkingJustin Lecher2013-12-063-3/+9
| | | | (Portage version: 2.2.7/cvs/Linux x86_64, signed Manifest commit with key B9D4F231BD1558AB!)
* sci-biology/samtools: Keyword for *-linux, tested by meJustin Lecher2013-12-061-20/+20
| | | | (Portage version: 2.2.7/cvs/Linux x86_64, signed Manifest commit with key B9D4F231BD1558AB!)
* sci-biology/samtools: Keyword for *-linux, tested by meJustin Lecher2013-12-066-13/+18
| | | | (Portage version: 2.2.7/cvs/Linux x86_64, signed Manifest commit with key B9D4F231BD1558AB!)
* sci-biology/samtools: Version BUmp, #485450Justin Lecher2013-09-201-5/+18
| | | | (Portage version: 2.2.6/cvs/Linux x86_64, signed Manifest commit with key B9D4F231BD1558AB!)
* sci-biology/samtools: Version BUmp, #485450Justin Lecher2013-09-203-1/+251
| | | | (Portage version: 2.2.6/cvs/Linux x86_64, signed Manifest commit with key B9D4F231BD1558AB!)
* sci-biology/samtools: Install bcftools and vcfutils.pl pointed out by mahnmutJustin Lecher2013-03-291-5/+6
| | | | (Portage version: 2.2.0_alpha169/cvs/Linux x86_64, signed Manifest commit with key 8009D6F070EB7916)
* sci-biology/samtools: Install bcftools and vcfutils.pl pointed out by mahnmutJustin Lecher2013-03-292-1/+62
| | | | (Portage version: 2.2.0_alpha169/cvs/Linux x86_64, signed Manifest commit with key 8009D6F070EB7916)
* sci-biology/samtools: Drop Andrey as maintainer so that bugs get assigned to ↵Justin Lecher2013-03-111-6/+6
| | | | | | sci-biology directly (Portage version: 2.2.0_alpha166/cvs/Linux x86_64, signed Manifest commit with key 70EB7916)
* sci-biology/samtools: Drop Andrey as maintainer so that bugs get assigned to ↵Justin Lecher2013-03-112-5/+4
| | | | | | sci-biology directly (Portage version: 2.2.0_alpha166/cvs/Linux x86_64, signed Manifest commit with key 70EB7916)
* sci-biology/samtools: Add missing deps and correct sed lines, #454134; ↵Justin Lecher2013-01-271-5/+5
| | | | | | thanks Torsten Veller (Portage version: 2.2.0_alpha161/cvs/Linux x86_64, signed Manifest commit with key 8009D6F070EB7916)
* sci-biology/samtools: Add missing deps and correct sed lines, #454134; ↵Justin Lecher2013-01-272-5/+15
| | | | | | thanks Torsten Veller (Portage version: 2.2.0_alpha161/cvs/Linux x86_64, signed Manifest commit with key 8009D6F070EB7916)
* sci-biology/samtools: Drop old; use pkg-config to check for libncursesJustin Lecher2013-01-231-16/+12
| | | | (Portage version: 2.2.0_alpha159/cvs/Linux x86_64, signed Manifest commit with key 8009D6F070EB7916)
* sci-biology/samtools: Drop old; use pkg-config to check for libncursesJustin Lecher2013-01-235-106/+23
| | | | (Portage version: 2.2.0_alpha159/cvs/Linux x86_64, signed Manifest commit with key 8009D6F070EB7916)
* Version bumpAndrey Kislyuk2011-09-261-6/+8
| | | | (Portage version: 2.2.0_alpha45/cvs/Linux x86_64, signed Manifest commit with key 16E7D8E6)
* Version bumpAndrey Kislyuk2011-09-262-1/+54
| | | | (Portage version: 2.2.0_alpha45/cvs/Linux x86_64)
* Version Bump, #375519Justin Lecher2011-07-181-8/+10
| | | | (Portage version: 2.2.0_alpha45/cvs/Linux x86_64, signed Manifest commit with key 70EB7916)
* Version Bump, #375519Justin Lecher2011-07-185-17/+83
| | | | (Portage version: 2.2.0_alpha45/cvs/Linux x86_64)
* Version BUmp, #365265Justin Lecher2011-04-301-3/+15
| | | | (Portage version: 2.2.0_alpha30/cvs/Linux x86_64, signed Manifest commit with key 70EB7916)
* Version BUmp, #365265Justin Lecher2011-04-304-8/+52
| | | | (Portage version: 2.2.0_alpha30/cvs/Linux x86_64)
* Drop empty RDEP/DEP, respect CC,LDFLAGS wrt 358563. Thanks to Diego for the ↵Kacper Kowalik2011-03-141-2/+2
| | | | | | report. (Portage version: 2.2.0_alpha26/cvs/Linux x86_64, unsigned Manifest commit)
* Drop empty RDEP/DEP, respect CC,LDFLAGS wrt 358563. Thanks to Diego for the ↵Kacper Kowalik2011-03-142-9/+18
| | | | | | report. (Portage version: 2.2.0_alpha26/cvs/Linux x86_64)
* add ~x64-macosAndrey Kislyuk2011-02-181-1/+1
| | | | (Portage version: 2.2_rc86/cvs/Linux x86_64, unsigned Manifest commit)
* add ~x64-macosAndrey Kislyuk2011-02-181-2/+2
| | | | (Portage version: 2.2_rc86/cvs/Linux x86_64)
* Address bug 354941, build library, correct versioningAndrey Kislyuk2011-02-181-11/+2
| | | | (Portage version: 2.2_rc86/cvs/Linux x86_64, unsigned Manifest commit)
* Address bug 354941, build library, correct versioningAndrey Kislyuk2011-02-182-1/+45
| | | | (Portage version: 2.2_rc86/cvs/Linux x86_64)
* x86 stable per bug 353566Thomas Kahle2011-02-171-16/+6
| | | | (Portage version: 2.1.9.39/cvs/Linux i686, signed Manifest commit with key 0xF87C90D6)