sci-biology/clustalx/clustalx-2.1-r1.ebuild


1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43

# Copyright 1999-2014 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
# $Header: /var/cvsroot/gentoo-x86/sci-biology/clustalx/clustalx-2.1-r1.ebuild,v 1.1 2014/01/06 08:33:15 jlec Exp $

EAPI=5

inherit eutils qt4-r2

DESCRIPTION="Graphical interface for the ClustalW multiple alignment program"
HOMEPAGE="http://www.ebi.ac.uk/tools/clustalw2/"
SRC_URI="http://www.clustal.org/download/current/${P}.tar.gz"

LICENSE="GPL-3 LGPL-3"
SLOT="0"
KEYWORDS="~amd64 ~x86"
IUSE=""

DEPEND="
	dev-qt/qtcore:4
	dev-qt/qtgui:4"
RDEPEND="${DEPEND}
	>=sci-biology/clustalw-${PV}"

src_prepare() {
	sed \
		-e "s|colprot.xml|${EPREFIX}/usr/share/${PN}/colprot.xml|" \
		-e "s|coldna.xml|${EPREFIX}/usr/share/${PN}/coldna.xml|" \
		-e "s|colprint.xml|${EPREFIX}/usr/share/${PN}/colprint.xml|" \
		-i ClustalQtParams.h || \
		die "Failed to patch shared files location."
	sed \
		-e "s|clustalx.hlp|${EPREFIX}/usr/share/${PN}/clustalx.hlp|" \
		-i HelpDisplayWidget.cpp || \
		die "Failed to patch help file location."
	rm -rf usr || die
}

src_install() {
	dobin clustalx
	insinto /usr/share/${PN}
	doins colprot.xml coldna.xml colprint.xml clustalx.hlp
	make_desktop_entry ${PN} ClustalX
}