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authorDonnie Berkholz <dberkholz@gentoo.org>2010-06-03 10:16:26 -0500
committerDonnie Berkholz <dberkholz@gentoo.org>2010-06-03 10:16:26 -0500
commitced009ef78c499c8e2430772b05161bcad38ab21 (patch)
treefc950a281cfe7ed558bd85a194bfdcbb5f1ca8b0 /sci-chemistry
parentAdd ipheth-pair for iphone USB tethering, modified from bug #306495. (diff)
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autodock-vina: New ebuild for a docking program.
Diffstat (limited to 'sci-chemistry')
-rw-r--r--sci-chemistry/autodock-vina/Manifest2
-rw-r--r--sci-chemistry/autodock-vina/autodock-vina-1.1.1.ebuild42
2 files changed, 44 insertions, 0 deletions
diff --git a/sci-chemistry/autodock-vina/Manifest b/sci-chemistry/autodock-vina/Manifest
new file mode 100644
index 0000000..3a20475
--- /dev/null
+++ b/sci-chemistry/autodock-vina/Manifest
@@ -0,0 +1,2 @@
+DIST autodock_vina_1_1_1.tgz 66972 RMD160 3e65dd8e38f9f726c9200057fc37e0fcafe7d460 SHA1 620b2f5713b7ad2f13cc90ddb837dfd9fd2b4875 SHA256 f9aaf6b2a322775e1be30f22fb69573418610300c0ab2b9345fd6accc1c1b9fd
+EBUILD autodock-vina-1.1.1.ebuild 922 RMD160 ea96ea8a6048d165d2f0bb5f4b6726344a2cd279 SHA1 95e01544f3b8134c26b2d5177f4c91c6518d8406 SHA256 1ac483150973914661ab03e0085f2f774c9c6d386434c51911da506e2221aded
diff --git a/sci-chemistry/autodock-vina/autodock-vina-1.1.1.ebuild b/sci-chemistry/autodock-vina/autodock-vina-1.1.1.ebuild
new file mode 100644
index 0000000..7c65eae
--- /dev/null
+++ b/sci-chemistry/autodock-vina/autodock-vina-1.1.1.ebuild
@@ -0,0 +1,42 @@
+# Copyright 1999-2010 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Header: $
+
+inherit toolchain-funcs
+
+MY_P=${P//-/_}
+MY_P=${MY_P//./_}
+
+DESCRIPTION="Program for drug discovery, molecular docking and virtual screening"
+HOMEPAGE="http://vina.scripps.edu/"
+SRC_URI="http://vina.scripps.edu/download/${MY_P}.tgz"
+LICENSE="Apache-2.0"
+SLOT="0"
+KEYWORDS="~amd64"
+IUSE=""
+RDEPEND="dev-libs/boost"
+DEPEND="${RDEPEND}"
+S=${WORKDIR}/${MY_P}/build/linux/release
+
+src_compile() {
+ # "boost-1_42"
+ BOOST_VERSION=$(basename $(dirname $(readlink -f /usr/include/boost)))
+ # "1_42"
+ BOOST_VERSION=${BOOST_VERSION#*-}
+ # "1.42"
+ BOOST_VERSION=${BOOST_VERSION/_/.}
+
+ emake \
+ BASE="/usr" \
+ BOOST_VERSION="${BOOST_VERSION}" \
+ GPP=$(tc-getCXX) \
+ C_OPTIONS="${CXXFLAGS}" \
+ LDFLAGS="-L\$(BASE)/lib -L. ${LDFLAGS}" \
+ || die
+}
+
+src_install() {
+ dobin vina || die
+ dobin vina_split || die
+}
+