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author | 2012-01-08 03:10:22 -0500 | |
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committer | 2012-01-08 03:10:22 -0500 | |
commit | f232fc33ddad7f0e36961486a4c6125a62feae29 (patch) | |
tree | 284fe156b4d58154273ce814aac8d0330a550288 /sci-biology/igv | |
parent | in main tree (diff) | |
download | sci-f232fc33ddad7f0e36961486a4c6125a62feae29.tar.gz sci-f232fc33ddad7f0e36961486a4c6125a62feae29.tar.bz2 sci-f232fc33ddad7f0e36961486a4c6125a62feae29.zip |
New package, ebuild written by me
Diffstat (limited to 'sci-biology/igv')
-rw-r--r-- | sci-biology/igv/ChangeLog | 7 | ||||
-rw-r--r-- | sci-biology/igv/Manifest | 2 | ||||
-rw-r--r-- | sci-biology/igv/igv-2.0.32.ebuild | 35 | ||||
-rw-r--r-- | sci-biology/igv/metadata.xml | 9 |
4 files changed, 53 insertions, 0 deletions
diff --git a/sci-biology/igv/ChangeLog b/sci-biology/igv/ChangeLog new file mode 100644 index 000000000..69f3a962c --- /dev/null +++ b/sci-biology/igv/ChangeLog @@ -0,0 +1,7 @@ +# ChangeLog for sci-biology/igv +# Copyright 1999-2012 Gentoo Foundation; Distributed under the GPL v2 +# $Header: $ + + 08 Jan 2012; Andrey Kislyuk <weaver@gentoo.org> ChangeLog: + New package, ebuild written by me + diff --git a/sci-biology/igv/Manifest b/sci-biology/igv/Manifest new file mode 100644 index 000000000..7eaca8703 --- /dev/null +++ b/sci-biology/igv/Manifest @@ -0,0 +1,2 @@ +EBUILD igv-2.0.32.ebuild 822 RMD160 db88edb421d3fa338c1ba0803ac34524d526aa34 SHA1 6a6330359806b8a89396b1a95abff054152c0cb7 SHA256 62e09868f0d3ebf03d79b5e6cfdde915b22f55d3234073b272fbea063c330030 +MISC igv-2.0.32.ebuild~ 921 RMD160 d7d05bab7b71325bcec98ac6e7237c587c51756f SHA1 81e2b15ac7c9bb8a0998289ee69045772db0b162 SHA256 ff7ab04f934ea56d489ca081e89864821116abae8092970cc3ac08f4b74de9f5 diff --git a/sci-biology/igv/igv-2.0.32.ebuild b/sci-biology/igv/igv-2.0.32.ebuild new file mode 100644 index 000000000..ef2dc7fd8 --- /dev/null +++ b/sci-biology/igv/igv-2.0.32.ebuild @@ -0,0 +1,35 @@ +# Copyright 1999-2012 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 +# $Header: $ + +EAPI=4 + +#ESVN_REPO_URI="http://igv.googlecode.com/svn/trunk" +ESVN_REPO_URI="http://igv.googlecode.com/svn/tags/Version_${PV}" + +EANT_BUILD_TARGET="all" +JAVA_ANT_REWRITE_CLASSPATH="true" +EANT_NEEDS_TOOLS="true" +WANT_ANT_TASKS="ant-apache-bcel" + +inherit subversion java-pkg-2 java-ant-2 + +DESCRIPTION="Integrative Genomics Viewer" +HOMEPAGE="http://www.broadinstitute.org/igv/" +SRC_URI="" +LICENSE="LGPL-2.1" +SLOT="0" +IUSE="" +KEYWORDS="~amd64" + +COMMON_DEPS="" +DEPEND=">=virtual/jdk-1.6 + ${COMMON_DEPS}" +RDEPEND=">=virtual/jre-1.6 + ${COMMON_DEPS}" + +src_install() { + java-pkg_newjar igv.jar + for i in lib/*.jar; do java-pkg_dojar $i; done + java-pkg_dolauncher igv --jar igv.jar --main org.broad.igv.ui.Main +} diff --git a/sci-biology/igv/metadata.xml b/sci-biology/igv/metadata.xml new file mode 100644 index 000000000..3302123e5 --- /dev/null +++ b/sci-biology/igv/metadata.xml @@ -0,0 +1,9 @@ +<?xml version="1.0" encoding="UTF-8"?> +<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> +<pkgmetadata> + <maintainer> + <email>weaver@gentoo.org</email> + <name>Andrey Kislyuk</name> + </maintainer> + <herd>sci-biology</herd> +</pkgmetadata> |