diff options
author | Justin Lecher <jlec@gentoo.org> | 2015-06-15 09:21:37 +0200 |
---|---|---|
committer | Justin Lecher <jlec@gentoo.org> | 2015-06-15 09:21:37 +0200 |
commit | 6f9bc02910243a77c9c67f768877a511868b8706 (patch) | |
tree | b6838623b7849668535c7de0d7beb15360534cc2 /sci-biology/manatee-igs | |
parent | sci-biology/glean: Fix dependency problems due to recent mask of perl-core pa... (diff) | |
download | sci-6f9bc02910243a77c9c67f768877a511868b8706.tar.gz sci-6f9bc02910243a77c9c67f768877a511868b8706.tar.bz2 sci-6f9bc02910243a77c9c67f768877a511868b8706.zip |
sci-biology/manatee-igs: Fix dependency problems due to recent mask of perl-core packages
Package-Manager: portage-2.2.20
Diffstat (limited to 'sci-biology/manatee-igs')
-rw-r--r-- | sci-biology/manatee-igs/ChangeLog | 7 | ||||
-rw-r--r-- | sci-biology/manatee-igs/manatee-igs-2.23.1.ebuild | 65 |
2 files changed, 38 insertions, 34 deletions
diff --git a/sci-biology/manatee-igs/ChangeLog b/sci-biology/manatee-igs/ChangeLog index 2c85c80cd..8a60b082e 100644 --- a/sci-biology/manatee-igs/ChangeLog +++ b/sci-biology/manatee-igs/ChangeLog @@ -1,7 +1,11 @@ # ChangeLog for sci-biology/manatee-igs -# Copyright 1999-2013 Gentoo Foundation; Distributed under the GPL v2 +# Copyright 1999-2015 Gentoo Foundation; Distributed under the GPL v2 # $Header: $ + 15 Jun 2015; Justin Lecher <jlec@gentoo.org> manatee-igs-2.23.1.ebuild: + sci-biology/manatee-igs: Fix dependency problems due to recent mask of perl- + core packages + 29 Aug 2013; Martin Mokrejs <mmokrejs@fold.natur.cuni.cz> manatee-igs-2.23.1.ebuild: Both versions of manatee have same license, so rename unify the license @@ -24,4 +28,3 @@ 08 Jan 2012; Martin Mokrejs <mmokrejs@fold.natur.cuni.cz> +manatee-igs-2.23.1.ebuild, +metadata.xml: new package for prokaryotic genome annotation and editing - diff --git a/sci-biology/manatee-igs/manatee-igs-2.23.1.ebuild b/sci-biology/manatee-igs/manatee-igs-2.23.1.ebuild index b858a9d5b..fb0fa9f2b 100644 --- a/sci-biology/manatee-igs/manatee-igs-2.23.1.ebuild +++ b/sci-biology/manatee-igs/manatee-igs-2.23.1.ebuild @@ -1,13 +1,14 @@ -# Copyright 1999-2014 Gentoo Foundation +# Copyright 1999-2015 Gentoo Foundation # Distributed under the terms of the GNU General Public License v2 # $Header: $ -EAPI=3 +EAPI=5 DESCRIPTION="IGS-modified version of the genome annotation tool using Chado database schema" HOMEPAGE="http://manatee.sourceforge.net/igs" -SRC_URI="http://sourceforge.net/projects/manatee/files/igs_manatee/"${PV}"/manatee-"${PV}"_linux.tgz - http://manatee.sourceforge.net/igs/docs/README_Linux.txt" +SRC_URI=" + http://sourceforge.net/projects/manatee/files/igs_manatee/"${PV}"/manatee-"${PV}"_linux.tgz + http://manatee.sourceforge.net/igs/docs/README_Linux.txt" LICENSE="Artistic-Manatee" SLOT="0" @@ -15,35 +16,35 @@ KEYWORDS="~amd64 ~x86" IUSE="" DEPEND=" - >=dev-libs/expat-1.95.8 - >=media-libs/gd-2.0.34 - virtual/perl-CGI - dev-perl/Bio-DB-Das-Chado - dev-perl/DBI - dev-perl/DBD-mysql - dev-perl/XML-Parser - dev-perl/XML-Twig - dev-perl/XML-Simple - dev-perl/XML-Writer - dev-perl/HTML-Template - dev-perl/Tree-DAG_Node - virtual/perl-File-Spec - virtual/perl-Data-Dumper - dev-perl/GD - dev-perl/GDTextUtil - dev-perl/GDGraph - virtual/perl-Storable - dev-perl/Log-Log4perl - dev-perl/Log-Cabin - dev-perl/DateManip - dev-perl/IO-Tee - dev-perl/MLDBM - dev-perl/JSON - dev-perl/JSON-Any - sci-biology/bioperl" + >=dev-libs/expat-1.95.8 + >=media-libs/gd-2.0.34 + dev-perl/CGI + dev-perl/Bio-DB-Das-Chado + dev-perl/DBI + dev-perl/DBD-mysql + dev-perl/XML-Parser + dev-perl/XML-Twig + dev-perl/XML-Simple + dev-perl/XML-Writer + dev-perl/HTML-Template + dev-perl/Tree-DAG_Node + virtual/perl-File-Spec + virtual/perl-Data-Dumper + dev-perl/GD + dev-perl/GDTextUtil + dev-perl/GDGraph + virtual/perl-Storable + dev-perl/Log-Log4perl + dev-perl/Log-Cabin + dev-perl/DateManip + dev-perl/IO-Tee + dev-perl/MLDBM + dev-perl/JSON + dev-perl/JSON-Any + sci-biology/bioperl" RDEPEND="${DEPEND} - >=dev-db/mysql-5.0 - >=www-servers/apache-2.2" + >=dev-db/mysql-5.0 + >=www-servers/apache-2.2" S="${WORKDIR}"/manatee-"${PV}"_linux |