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authorJustin Lecher <jlec@gentoo.org>2010-06-09 12:43:15 +0200
committerJustin Lecher <jlec@gentoo.org>2010-06-09 12:43:15 +0200
commit8ec3ec2dabd5c3870962777de8a60c33973cb7cb (patch)
treeb49c1b970f99fd0e23973bba563f5699e3f635d6 /sci-chemistry/nmrpipe/files
parentadded missing envs (diff)
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Fixes for envs
(Portage version: 2.2_rc67/git/Linux x86_64) (Signed Manifest commit)
Diffstat (limited to 'sci-chemistry/nmrpipe/files')
-rw-r--r--sci-chemistry/nmrpipe/files/env-nmrpipe27
-rw-r--r--sci-chemistry/nmrpipe/files/env-nmrpipe-new5
2 files changed, 4 insertions, 28 deletions
diff --git a/sci-chemistry/nmrpipe/files/env-nmrpipe b/sci-chemistry/nmrpipe/files/env-nmrpipe
deleted file mode 100644
index 1ca8dbb6e..000000000
--- a/sci-chemistry/nmrpipe/files/env-nmrpipe
+++ /dev/null
@@ -1,27 +0,0 @@
-# Platform
-BINTYPE="linux9"
-
-# NMRPipe
-NMRBASE="/opt/nmrpipe"
-NMRTXT="${NMRBASE}/nmrtxt"
-MANPATH="${NMRBASE}/man"
-PATH="${NMRBASE}/bin"
-# Auxiliary NMRPipe scripts
-# PATH="${PATH}:${NMRBASE}/com"
-
-TALOS_DIR="${NMRBASE}/talos"
-TALOSP_DIR="${NMRBASE}/talosplus"
-
-# Dynamo
-DYNAMO_DIR="${NMRBASE}/dynamo"
-DYNAMO_PARAMS="${DYNAMO_DIR}/params"
-SURF_DIR="${DYNAMO_DIR}/surface"
-PATH="${PATH}:${DYNAMO_DIR}/tcl"
-DYNAMO_KEY="2002084"
-
-# PDBH
-PDBH_BASE="${NMRBASE}/pdb"
-PDBH_DIR="${PDBH_BASE}/pdbH"
-PDBH_LIST="${PDBH_BASE}/pdbH.list"
-PDBH_TAB="${PDBH_BASE}/resolution.tab"
-
diff --git a/sci-chemistry/nmrpipe/files/env-nmrpipe-new b/sci-chemistry/nmrpipe/files/env-nmrpipe-new
index 8c5993c7d..c8aa37b0c 100644
--- a/sci-chemistry/nmrpipe/files/env-nmrpipe-new
+++ b/sci-chemistry/nmrpipe/files/env-nmrpipe-new
@@ -1,12 +1,15 @@
# Platform
BINTYPE="linux9"
+NMRBINTYPE="linux9"
PATH="/opt/nmrpipe/com:/opt/nmrpipe/bin:/opt/nmrpipe/dynamo/tcl"
# NMRPipe
NMRBASE="/opt/nmrpipe"
NMRTXT="/opt/nmrpipe/nmrtxt"
MANPATH="/opt/nmrpipe/man"
-# Auxiliary NMRPipe scripts
+
+TALOS_DIR="/opt/nmrpipe/talos"
+TALOSP_DIR="/opt/nmrpipe/talosplus"
# Dynamo
DYNAMO_DIR="/opt/nmrpipe/dynamo"