Update NeXus ebuild to version 4.4.1

Versions from 4.4 are built with CMake

Python support is now in a separate project, called Nexpy

3 files changed, 25 insertions, 28 deletions

diff --git a/sci-libs/nexus/Manifest b/sci-libs/nexus/Manifest
index 47ec4c670..0828e19bb 100644
--- a/sci-libs/nexus/Manifest
+++ b/sci-libs/nexus/Manifest
@@ -1 +1 @@
-DIST nexus-4.3.1.tar.gz 16734478 SHA256 da186e0978321e793800cd45611fc767d46cf5d7d2c8f60277b3f48b4a84cb0b SHA512 f470d4bc1e7f3d714b4849798a9d509b8d23da486a25d4998d023fea1f148030ab86b88ac088ad71847db6692479e1ca2fad48d2c4dad016f9652e19c08f5a0b WHIRLPOOL effa806f7372ef974412aa974bdf4b84cfc7632ecb3153638bc9e948b80eb87130c0a4df9b6d010d36b3c0d7d8bdbde17e58d17de8ec298a161ebcfa2dc4b045
+DIST v4.4.1.tar.gz 4820168 SHA256 5674ff3ac5573e80a33963804975ae1dadf55a95bcee818f23f485569d72bf1b SHA512 f561e5dcb48d6bb5d8acbfecae0e447fe7ca5c82ef85d03d3a9874a2f31e47769ac4229579a31321e2462160f39f6a1f1af28e7d05d5ff9985b1c4281cf053d1 WHIRLPOOL e86d2407eac3ca65274e9e622d3859321550966077b378f918eaafd9a37f68e0958f2b25329f07b8a93fd535613cbe2a9b5ef0d4a7a003acbc199ae9acf99915
diff --git a/sci-libs/nexus/metadata.xml b/sci-libs/nexus/metadata.xml
index 2c83b9196..bbec0bdc3 100644
--- a/sci-libs/nexus/metadata.xml
+++ b/sci-libs/nexus/metadata.xml
@@ -3,9 +3,9 @@
 <pkgmetadata>
 	<herd>sci</herd>
 	<maintainer>
-		<email>cjk34@cam.ac.uk</email>
+		<email>c.kerr@embl-hamburg.de</email>
 		<name>Chris Kerr</name>
-		<description>I don't develop this software, I'm just a Gentoo user who wanted to install it</description>
+		<description>I occasionally submit patches to NeXus</description>
 	</maintainer>
 	<longdescription>Libraries and tools for the NeXus data format, developed
   collaboratively by scientists from major scientific facilities to facilitate
@@ -13,13 +13,11 @@
   NeXus is based on HDF5.</longdescription>
 	<use>
 		<flag name="xml">Allow using the verbose XML representation of NeXus data</flag>
+		<flag name="hdf4">Support the old HDF4 representation</flag>
+		<flag name="hdf5">Support the standard representation (HDF5)</flag>
 		<flag name="doc">Generate library documentation with <pkg>app-doc/doxygen</pkg></flag>
-		<flag name="swig">Generate bindings with <pkg>dev-lang/swig</pkg></flag>
-		<flag name="cbf">Support for Crystallographic Binary Format files with sci-libs/cbflib</flag>
 		<flag name="fortran">Build the Fortran bindings</flag>
-		<flag name="guile">Build the Scheme bindings</flag>
-		<flag name="tcl">Build the TCL bindings</flag>
 		<flag name="java">Build the Java bindings</flag>
-		<flag name="python">Build the Python bindings</flag>
+		<flag name="utils">Build optional utility applications</flag>
 	</use>
 </pkgmetadata>
diff --git a/sci-libs/nexus/nexus-4.3.1.ebuild b/sci-libs/nexus/nexus-4.4.1.ebuild
index 6111a06d6..53b5ba159 100644
--- a/sci-libs/nexus/nexus-4.3.1.ebuild
+++ b/sci-libs/nexus/nexus-4.4.1.ebuild
@@ -7,37 +7,35 @@ EAPI=5
 FORTRAN_NEEDED=fortran
 FORTRAN_STANDARD=90
 PYTHON_COMPAT=( python2_7 )
-inherit fortran-2 flag-o-matic python-single-r1
+inherit cmake-utils fortran-2 java-pkg-opt-2
 
 DESCRIPTION="Data format for neutron and x-ray scattering data"
 HOMEPAGE="http://nexusformat.org/"
-SRC_URI="http://download.nexusformat.org/kits/${PV}/${P}.tar.gz"
+SRC_URI="https://github.com/nexusformat/code/archive/v${PV}.tar.gz"
 
 LICENSE="LGPL-2.1"
 SLOT="0"
 KEYWORDS="~amd64"
-IUSE="cbf doc fortran guile java python swig tcl xml"
+IUSE="doc cxx fortran -hdf4 +hdf5 java utils xml"
 
-REQUIRED_USE="${PYTHON_REQUIRED_USE}"
+REQUIRED_USE=" || ( hdf4 hdf5 xml ) "
 
 RDEPEND="
-	sci-libs/hdf5
-	python?	( ${PYTHON_DEPS} )
 	xml? ( dev-libs/mxml )
-	cbf? ( sci-libs/cbflib )
-	guile? ( dev-scheme/guile:12 )
-" # N.B. the website says it depends on HDF4 too, but I find it builds fine without it
+	hdf4? ( sci-libs/hdf )
+	hdf5? ( sci-libs/hdf5[zlib] )
+	utils? ( sys-libs/readline:0 sys-libs/libtermcap-compat dev-libs/libxml2 )
+"
 
 DEPEND="${RDEPEND}
 	doc? ( app-doc/doxygen dev-tex/xcolor )
-	swig? ( dev-lang/swig:0 )
 "
 
 pkg_setup() {
-	use python && python-single-r1_pkg_setup
 	# Handling of dependencies between Fortran module files doesn't play well with parallel make
 	use fortran && export MAKEOPTS="${MAKEOPTS} -j1 "
 	use fortran && fortran-2_pkg_setup
+	java-pkg-opt-2_pkg_setup
 }
 
 src_configure() {
@@ -45,13 +43,14 @@ src_configure() {
 	# http://www.gentoo.org/proj/en/base/amd64/howtos/?part=1&chap=3
 	use fortran && append-fflags -fPIC
 
-	econf \
-		$(use_with doc doxygen) \
-		$(use_with fortran f90) \
-		$(use_with swig) \
-		$(use_with xml) \
-		$(use_with cbf cbflib) \
-		$(use_with guile) \
-		$(use_with java) \
-		$(use_with python)
+	cmake-utils_src_configure \
+		$(cmake-utils_use_enable hdf4) \
+		$(cmake-utils_use_enable hdf5) \
+		$(cmake-utils_use_enable xml MXML) \
+		$(cmake-utils_use_enable cxx) \
+		$(cmake-utils_use_enable fortran FORTRAN90) \
+		$(cmake-utils_use_enable fortran FORTRAN77) \
+		$(cmake-utils_use_enable java) \
+		$(cmake-utils_use_enable utils APPS) \
+		$(cmake-utils_use_enable utils CONTRIB)
 }