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authorEli Schwartz <eschwartz93@gmail.com>2024-02-28 23:26:03 -0500
committerSam James <sam@gentoo.org>2024-02-29 04:47:16 +0000
commit8479cf13101c1bcc4bf088768449a617f0146c8a (patch)
tree9e37d91d208e9fdbf217bce6ff9b7476ba380a1e /sci-biology/bwa
parentnet-p2p/rtorrent: mark as LTO-unsafe (diff)
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sci-biology/bwa: mark as LTO-unsafe
Closes: https://bugs.gentoo.org/862255 Signed-off-by: Eli Schwartz <eschwartz93@gmail.com> Signed-off-by: Sam James <sam@gentoo.org>
Diffstat (limited to 'sci-biology/bwa')
-rw-r--r--sci-biology/bwa/bwa-0.7.17.ebuild9
1 files changed, 7 insertions, 2 deletions
diff --git a/sci-biology/bwa/bwa-0.7.17.ebuild b/sci-biology/bwa/bwa-0.7.17.ebuild
index 3da06fd74f92..e1b6dbb6184e 100644
--- a/sci-biology/bwa/bwa-0.7.17.ebuild
+++ b/sci-biology/bwa/bwa-0.7.17.ebuild
@@ -1,9 +1,9 @@
-# Copyright 1999-2020 Gentoo Authors
+# Copyright 1999-2024 Gentoo Authors
# Distributed under the terms of the GNU General Public License v2
EAPI=7
-inherit toolchain-funcs
+inherit flag-o-matic toolchain-funcs
DESCRIPTION="Burrows-Wheeler Alignment Tool, a fast short genomic sequence aligner"
HOMEPAGE="https://github.com/lh3/bwa/"
@@ -25,6 +25,11 @@ PATCHES=(
DOCS=( NEWS.md README-alt.md README.md )
src_configure() {
+ # -Werror=lto-type-mismatch
+ # https://bugs.gentoo.org/862255
+ # https://github.com/lh3/bwa/issues/411
+ filter-lto
+
tc-export CC AR
}