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authorOlivier Fisette <ribosome@gentoo.org>2004-09-15 19:09:27 +0000
committerOlivier Fisette <ribosome@gentoo.org>2004-09-15 19:09:27 +0000
commit9f19aa577f394fe48c083d42c8b6867a67d886a5 (patch)
treed959fd9296e76a445436ba212f1dff5712ae6e1c /app-sci
parentStable on hppa. (diff)
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Fixed potential problem with program staden_help.
Diffstat (limited to 'app-sci')
-rw-r--r--app-sci/staden/ChangeLog8
-rw-r--r--app-sci/staden/Manifest7
-rw-r--r--app-sci/staden/files/digest-staden-1.4.1-r1 (renamed from app-sci/staden/files/digest-staden-1.4.1)0
-rw-r--r--app-sci/staden/files/staden-1.4.1-staden_help.new5
-rw-r--r--app-sci/staden/staden-1.4.1-r1.ebuild (renamed from app-sci/staden/staden-1.4.1.ebuild)9
5 files changed, 20 insertions, 9 deletions
diff --git a/app-sci/staden/ChangeLog b/app-sci/staden/ChangeLog
index 8a064c8c934f..d2df53fa30b5 100644
--- a/app-sci/staden/ChangeLog
+++ b/app-sci/staden/ChangeLog
@@ -1,6 +1,12 @@
# ChangeLog for app-sci/staden
# Copyright 1999-2004 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/app-sci/staden/ChangeLog,v 1.1 2004/09/15 01:46:36 ribosome Exp $
+# $Header: /var/cvsroot/gentoo-x86/app-sci/staden/ChangeLog,v 1.2 2004/09/15 19:09:27 ribosome Exp $
+
+*staden-1.4.1-r1 (15 Sep 2004)
+
+ 15 Sep 2004; Olivier Fisette <ribosome@gentoo.org> +staden-1.4.1-r1.ebuild,
+ -staden-1.4.1.ebuild:
+ Fixed the staden_help program.
*staden-1.4.1 (14 Sep 2004)
diff --git a/app-sci/staden/Manifest b/app-sci/staden/Manifest
index 6b43c4a1bd45..540ea3633aa5 100644
--- a/app-sci/staden/Manifest
+++ b/app-sci/staden/Manifest
@@ -1,12 +1,13 @@
-MD5 d281a9e540142d34f5b33d32fbf3a3ca staden-1.4.1.ebuild 11165
-MD5 140300aa34390597ca2711f673df6c51 ChangeLog 623
+MD5 c306bebaff5d292decd309c3fa356100 staden-1.4.1-r1.ebuild 11096
+MD5 a169185d495c6ef6fc593d5eb1e207a5 ChangeLog 791
MD5 f189a3c4ff5ae55bcee4f8ed0ace5d20 metadata.xml 254
MD5 e908bf4692dd3494ec22f07db2e7a9f5 files/staden-1.4.1-env 225
MD5 3699a9d368068d835cbd8568d50d23e5 files/staden-1.4.1-gap4.patch 463
MD5 ccf3b22c1399cd7f80f3f6f1caec2cda files/staden-1.4.1-tracediff.patch 334
+MD5 1026629ee4b47aea8043dd7f35eb2ffe files/staden-1.4.1-staden_help.new 159
MD5 bd82265e893628c1b46329d77e1f11d8 files/staden-1.4.1-iwidgetsrc.new 445
MD5 8650f58c55b83838846447c89543255d files/staden-1.4.1-getopt.patch 375
MD5 7717f77ecd800d0b3049974db3fcd0a9 files/staden-1.4.1-prefinish.patch 362
MD5 a8ceefd2b3b2c1c0053a504561635379 files/staden-1.4.1-mutscan.patch 328
-MD5 c253634558f4beb820df20d8b109ad99 files/digest-staden-1.4.1 150
+MD5 c253634558f4beb820df20d8b109ad99 files/digest-staden-1.4.1-r1 150
MD5 ea4a62a1cd5070014d2c9352eeecf06a files/staden-1.4.1-tk_utils.patch 368
diff --git a/app-sci/staden/files/digest-staden-1.4.1 b/app-sci/staden/files/digest-staden-1.4.1-r1
index c89e7f7a1c2b..c89e7f7a1c2b 100644
--- a/app-sci/staden/files/digest-staden-1.4.1
+++ b/app-sci/staden/files/digest-staden-1.4.1-r1
diff --git a/app-sci/staden/files/staden-1.4.1-staden_help.new b/app-sci/staden/files/staden-1.4.1-staden_help.new
new file mode 100644
index 000000000000..4e371d848ce6
--- /dev/null
+++ b/app-sci/staden/files/staden-1.4.1-staden_help.new
@@ -0,0 +1,5 @@
+#!/bin/sh
+
+[ -z ${BROWSER} ] \
+ && echo 'staden_help: "BROWSER" environment variable not set.' && exit 1 \
+ || ${BROWSER} ${STADENROOT}/doc/documentation.html
diff --git a/app-sci/staden/staden-1.4.1.ebuild b/app-sci/staden/staden-1.4.1-r1.ebuild
index 57bd08f49385..4d1e97482ff2 100644
--- a/app-sci/staden/staden-1.4.1.ebuild
+++ b/app-sci/staden/staden-1.4.1-r1.ebuild
@@ -1,10 +1,10 @@
# Copyright 1999-2004 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/app-sci/staden/staden-1.4.1.ebuild,v 1.1 2004/09/15 01:46:36 ribosome Exp $
+# $Header: /var/cvsroot/gentoo-x86/app-sci/staden/staden-1.4.1-r1.ebuild,v 1.1 2004/09/15 19:09:27 ribosome Exp $
inherit eutils
-DESCRIPTION="The Staden Package: biological sequence handling and analysis"
+DESCRIPTION="The Staden Package - Biological sequence handling and analysis"
HOMEPAGE="http://${PN}.sourceforge.net/"
SRC_URI="mirror://sourceforge/${PN}/${PN}-src-rel-${PV//./-}.tar.gz
mirror://gentoo/${P}-missing-doc.tar.bz2"
@@ -28,7 +28,6 @@ RDEPEND="app-shells/ksh
=dev-tcltk/itcl-3.2*
dev-tcltk/iwidgets
media-libs/libpng
- virtual/textbrowser
virtual/x11"
S=${WORKDIR}/${PN}-src-rel-${PV//./-}
@@ -194,8 +193,8 @@ src_compile() {
# Netscape is not a good default browser (security masked in Portage).
# Use documentation.html rather than staden_home.html as the top-level
# hypertext documentation file.
- cd ${S}/linux-bin
- sed -i -e 's%${BROWSER:-netscape} $STADENROOT/doc/staden_home.html%${BROWSER:-lynx} $STADENROOT/doc/documentation.html%' staden_help
+ cp ${FILESDIR}/${P}-staden_help.new ${S}/linux-bin/staden_help
+ chmod +x ${S}/linux-bin/staden_help
# Patch hypertext documentation.
cd ${S}/doc/manual