Added global "USE" flag "emboss" to the base and x86 profiles (except hardened and obsd). It is enabled by default and provided by "sci-biology/emboss".

20 files changed, 60 insertions, 54 deletions

diff --git a/profiles/base/use.defaults b/profiles/base/use.defaults
index f0b95d6a3b4f..849da872f439 100644
--- a/profiles/base/use.defaults
+++ b/profiles/base/use.defaults
@@ -1,6 +1,6 @@
 # Copyright 1999-2005 Gentoo Foundation
 # Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/profiles/base/use.defaults,v 1.14 2005/02/14 01:28:02 robbat2 Exp $
+# $Header: /var/cvsroot/gentoo-x86/profiles/base/use.defaults,v 1.15 2005/02/18 03:46:39 ribosome Exp $
 
 aalib				media-libs/aalib
 adns				net-libs/adns
@@ -16,6 +16,7 @@ cscope				dev-util/cscope
 cups				net-print/cups
 curl				net-misc/curl
 directfb			dev-libs/DirectFB
+emboss				sci-biology/emboss
 esd					media-sound/esound
 fam					app-admin/fam
 firebird			dev-db/firebird
diff --git a/profiles/default-linux/x86/2004.0/make.defaults b/profiles/default-linux/x86/2004.0/make.defaults
index a3b4d7d2aa01..ae6adc4307f0 100644
--- a/profiles/default-linux/x86/2004.0/make.defaults
+++ b/profiles/default-linux/x86/2004.0/make.defaults
@@ -1,7 +1,7 @@
 # Copyright 1999-2004 Gentoo Foundation
 # Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/profiles/default-linux/x86/2004.0/make.defaults,v 1.13 2005/01/19 03:43:48 vapier Exp $
+# $Header: /var/cvsroot/gentoo-x86/profiles/default-linux/x86/2004.0/make.defaults,v 1.14 2005/02/18 03:46:39 ribosome Exp $
 
 GRP_STAGE23_USE="ipv6 pam tcpd readline nls ssl gpm perl python berkdb acl ncurses"
 
-USE="oss apm arts avi berkdb bitmap-fonts crypt cups encode font-server foomaticdb fortran f77 gdbm gif gpm gtk gtk2 imlib jpeg kde gnome libg++ libwww mad mikmod motif mpeg ncurses nls oggvorbis opengl pam pdflib png python qt quicktime readline sdl slang spell ssl svga tcpd truetype truetype-fonts type1-fonts X xml2 xmms xv zlib"
+USE="oss apm arts avi berkdb bitmap-fonts crypt cups emboss encode font-server foomaticdb fortran f77 gdbm gif gpm gtk gtk2 imlib jpeg kde gnome libg++ libwww mad mikmod motif mpeg ncurses nls oggvorbis opengl pam pdflib png python qt quicktime readline sdl slang spell ssl svga tcpd truetype truetype-fonts type1-fonts X xml2 xmms xv zlib"
diff --git a/profiles/default-linux/x86/2004.2/gcc34/2.6/make.defaults b/profiles/default-linux/x86/2004.2/gcc34/2.6/make.defaults
index 847dfc0811a7..a761e1f4c903 100644
--- a/profiles/default-linux/x86/2004.2/gcc34/2.6/make.defaults
+++ b/profiles/default-linux/x86/2004.2/gcc34/2.6/make.defaults
@@ -1,7 +1,7 @@
 # Copyright 1999-2004 Gentoo Foundation
 # Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/profiles/default-linux/x86/2004.2/gcc34/2.6/make.defaults,v 1.7 2005/01/19 03:43:48 vapier Exp $
+# $Header: /var/cvsroot/gentoo-x86/profiles/default-linux/x86/2004.2/gcc34/2.6/make.defaults,v 1.8 2005/02/18 03:46:39 ribosome Exp $
 
 GRP_STAGE23_USE="ipv6 pam tcpd readline nls ssl gpm perl python berkdb acl ncurses"
 
-USE="oss apm arts avi berkdb crypt cups encode foomaticdb gdbm gif gpm imlib jpeg libg++ libwww mad mikmod motif mpeg ncurses nls oggvorbis opengl pam pdflib png python quicktime readline sdl slang spell ssl svga tcpd truetype X xml2 xmms xv zlib"
+USE="oss apm arts avi berkdb crypt cups emboss encode foomaticdb gdbm gif gpm imlib jpeg libg++ libwww mad mikmod motif mpeg ncurses nls oggvorbis opengl pam pdflib png python quicktime readline sdl slang spell ssl svga tcpd truetype X xml2 xmms xv zlib"
diff --git a/profiles/default-linux/x86/2004.2/gcc34/make.defaults b/profiles/default-linux/x86/2004.2/gcc34/make.defaults
index e3857b44c332..283659b13e09 100644
--- a/profiles/default-linux/x86/2004.2/gcc34/make.defaults
+++ b/profiles/default-linux/x86/2004.2/gcc34/make.defaults
@@ -1,7 +1,7 @@
 # Copyright 1999-2004 Gentoo Foundation
 # Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/profiles/default-linux/x86/2004.2/gcc34/make.defaults,v 1.9 2005/01/19 03:43:48 vapier Exp $
+# $Header: /var/cvsroot/gentoo-x86/profiles/default-linux/x86/2004.2/gcc34/make.defaults,v 1.10 2005/02/18 03:46:39 ribosome Exp $
 
 GRP_STAGE23_USE="ipv6 pam tcpd readline nls ssl gpm perl python berkdb acl ncurses"
 
-USE="oss apm arts avi berkdb crypt cups encode foomaticdb gdbm gif gpm imlib jpeg libg++ libwww mad mikmod motif mpeg ncurses nls oggvorbis opengl pam pdflib png python quicktime readline sdl slang spell ssl svga tcpd truetype X xml2 xmms xv zlib"
+USE="oss apm arts avi berkdb crypt cups emboss encode foomaticdb gdbm gif gpm imlib jpeg libg++ libwww mad mikmod motif mpeg ncurses nls oggvorbis opengl pam pdflib png python quicktime readline sdl slang spell ssl svga tcpd truetype X xml2 xmms xv zlib"
diff --git a/profiles/default-linux/x86/2004.2/make.defaults b/profiles/default-linux/x86/2004.2/make.defaults
index c519552cd58f..01ebed158fa3 100644
--- a/profiles/default-linux/x86/2004.2/make.defaults
+++ b/profiles/default-linux/x86/2004.2/make.defaults
@@ -1,7 +1,7 @@
 # Copyright 1999-2004 Gentoo Foundation
 # Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/profiles/default-linux/x86/2004.2/make.defaults,v 1.12 2005/01/19 03:43:48 vapier Exp $
+# $Header: /var/cvsroot/gentoo-x86/profiles/default-linux/x86/2004.2/make.defaults,v 1.13 2005/02/18 03:46:39 ribosome Exp $
 
 GRP_STAGE23_USE="ipv6 pam tcpd readline nls ssl gpm perl python berkdb acl ncurses"
 
-USE="oss apm arts avi berkdb bitmap-fonts crypt cups encode fortran f77 font-server foomaticdb gdbm gif gpm gtk gtk2 imlib jpeg kde gnome libg++ libwww mad mikmod motif mpeg ncurses nls oggvorbis opengl pam pdflib png python qt quicktime readline sdl slang spell ssl svga tcpd truetype truetype-fonts type1-fonts X xml2 xmms xv zlib"
+USE="oss apm arts avi berkdb bitmap-fonts crypt cups emboss encode fortran f77 font-server foomaticdb gdbm gif gpm gtk gtk2 imlib jpeg kde gnome libg++ libwww mad mikmod motif mpeg ncurses nls oggvorbis opengl pam pdflib png python qt quicktime readline sdl slang spell ssl svga tcpd truetype truetype-fonts type1-fonts X xml2 xmms xv zlib"
diff --git a/profiles/default-linux/x86/2004.3/make.defaults b/profiles/default-linux/x86/2004.3/make.defaults
index 0eb180cbbeb2..9c1a68788041 100644
--- a/profiles/default-linux/x86/2004.3/make.defaults
+++ b/profiles/default-linux/x86/2004.3/make.defaults
@@ -1,7 +1,7 @@
 # Copyright 1999-2004 Gentoo Foundation
 # Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/profiles/default-linux/x86/2004.3/make.defaults,v 1.10 2005/01/19 03:43:48 vapier Exp $
+# $Header: /var/cvsroot/gentoo-x86/profiles/default-linux/x86/2004.3/make.defaults,v 1.11 2005/02/18 03:46:39 ribosome Exp $
 
 GRP_STAGE23_USE="ipv6 pam tcpd readline nls ssl gpm perl python berkdb ncurses"
 
-USE="oss apm arts avi berkdb bitmap-fonts crypt cups encode fortran f77 font-server foomaticdb gdbm gif gpm gtk gtk2 imlib jpeg kde gnome libg++ libwww mad mikmod motif mpeg ncurses nls oggvorbis opengl pam pdflib png python qt quicktime readline sdl spell ssl svga tcpd truetype truetype-fonts type1-fonts X xml2 xmms xv zlib"
+USE="oss apm arts avi berkdb bitmap-fonts crypt cups emboss encode fortran f77 font-server foomaticdb gdbm gif gpm gtk gtk2 imlib jpeg kde gnome libg++ libwww mad mikmod motif mpeg ncurses nls oggvorbis opengl pam pdflib png python qt quicktime readline sdl spell ssl svga tcpd truetype truetype-fonts type1-fonts X xml2 xmms xv zlib"
diff --git a/profiles/default-linux/x86/2005.0/make.defaults b/profiles/default-linux/x86/2005.0/make.defaults
index 63a6591ebae4..723508d4bfca 100644
--- a/profiles/default-linux/x86/2005.0/make.defaults
+++ b/profiles/default-linux/x86/2005.0/make.defaults
@@ -1,7 +1,7 @@
 # Copyright 1999-2005 Gentoo Foundation
 # Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/profiles/default-linux/x86/2005.0/make.defaults,v 1.6 2005/01/19 03:43:48 vapier Exp $
+# $Header: /var/cvsroot/gentoo-x86/profiles/default-linux/x86/2005.0/make.defaults,v 1.7 2005/02/18 03:46:39 ribosome Exp $
 
 GRP_STAGE23_USE="ipv6 pam tcpd readline nls ssl gpm perl python berkdb ncurses"
 
-USE="oss apm arts avi berkdb bitmap-fonts crypt cups encode fortran f77 foomaticdb gdbm gif gpm gtk gtk2 imlib jpeg kde gnome libg++ libwww mad mikmod motif mpeg ncurses nls oggvorbis opengl pam pdflib png python qt quicktime readline sdl spell ssl svga tcpd truetype truetype-fonts type1-fonts X xml2 xmms xv zlib"
+USE="oss apm arts avi berkdb bitmap-fonts crypt cups emboss encode fortran f77 foomaticdb gdbm gif gpm gtk gtk2 imlib jpeg kde gnome libg++ libwww mad mikmod motif mpeg ncurses nls oggvorbis opengl pam pdflib png python qt quicktime readline sdl spell ssl svga tcpd truetype truetype-fonts type1-fonts X xml2 xmms xv zlib"
diff --git a/profiles/default-linux/x86/gcc2/make.defaults b/profiles/default-linux/x86/gcc2/make.defaults
index 92f2ede09358..352fcdef5101 100644
--- a/profiles/default-linux/x86/gcc2/make.defaults
+++ b/profiles/default-linux/x86/gcc2/make.defaults
@@ -1,5 +1,5 @@
 # Copyright 1999-2004 Gentoo Foundation
 # Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/profiles/default-linux/x86/gcc2/make.defaults,v 1.14 2005/01/19 03:43:48 vapier Exp $
+# $Header: /var/cvsroot/gentoo-x86/profiles/default-linux/x86/gcc2/make.defaults,v 1.15 2005/02/18 03:46:39 ribosome Exp $
 
-USE="oss apm arts avi berkdb bitmap-fonts crypt cups encode fortran f77 font-server gdbm gif gpm gtk imlib java jpeg kde libg++ libwww mikmod mmx motif  mpeg ncurses nls oggvorbis opengl pam pdflib png python qt quicktime readline sdl slang spell ssl svga tcpd truetype truetype-fonts type1-fonts X xml2 xmms xv" 
+USE="oss apm arts avi berkdb bitmap-fonts crypt cups emboss encode fortran f77 font-server gdbm gif gpm gtk imlib java jpeg kde libg++ libwww mikmod mmx motif  mpeg ncurses nls oggvorbis opengl pam pdflib png python qt quicktime readline sdl slang spell ssl svga tcpd truetype truetype-fonts type1-fonts X xml2 xmms xv"
diff --git a/profiles/default-linux/x86/gcc31/make.defaults b/profiles/default-linux/x86/gcc31/make.defaults
index ddd0ab5f1191..2b32b8affc14 100644
--- a/profiles/default-linux/x86/gcc31/make.defaults
+++ b/profiles/default-linux/x86/gcc31/make.defaults
@@ -1,5 +1,5 @@
 # Copyright 1999-2005 Gentoo Foundation
 # Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/profiles/default-linux/x86/gcc31/make.defaults,v 1.14 2005/01/19 03:43:48 vapier Exp $
+# $Header: /var/cvsroot/gentoo-x86/profiles/default-linux/x86/gcc31/make.defaults,v 1.15 2005/02/18 03:46:39 ribosome Exp $
 
-USE="oss apm arts avi berkdb bitmap=fonts crypt cups encode fortran f77 gdbm gif gpm gtk imlib java jpeg kde gnome libg++ libwww mikmod mmx motif mpeg ncurses nls oggvorbis opengl pam pdflib png python qt quicktime readline sdl slang spell ssl svga tcpd truetype X xml2 xmms xv zlib"
+USE="oss apm arts avi berkdb bitmap=fonts crypt cups emboss encode fortran f77 gdbm gif gpm gtk imlib java jpeg kde gnome libg++ libwww mikmod mmx motif mpeg ncurses nls oggvorbis opengl pam pdflib png python qt quicktime readline sdl slang spell ssl svga tcpd truetype X xml2 xmms xv zlib"
diff --git a/profiles/default-linux/x86/xbox/make.defaults b/profiles/default-linux/x86/xbox/make.defaults
index 2fe7e5c5b5de..bf20ffa6b8b5 100644
--- a/profiles/default-linux/x86/xbox/make.defaults
+++ b/profiles/default-linux/x86/xbox/make.defaults
@@ -1,9 +1,9 @@
 # Copyright 1999-2004 Gentoo Foundation
 # Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/profiles/default-linux/x86/xbox/make.defaults,v 1.7 2005/01/19 03:43:48 vapier Exp $
+# $Header: /var/cvsroot/gentoo-x86/profiles/default-linux/x86/xbox/make.defaults,v 1.8 2005/02/18 03:46:39 ribosome Exp $
 
 GRP_STAGE23_USE="ipv6 pam tcpd readline nls ssl gpm perl python berkdb ncurses"
 
-USE="oss apm arts avi berkdb bitmap-fonts crypt cups encode fortran f77 font-server foomaticdb gdbm gif gpm gtk gtk2 imlib jpeg kde gnome libg++ libwww mad mikmod motif mpeg ncurses nls oggvorbis opengl pam pdflib png python qt quicktime readline sdl slang spell ssl svga tcpd truetype truetype-fonts type1-fonts X xml2 xmms xv zlib"
+USE="oss apm arts avi berkdb bitmap-fonts crypt cups emboss encode fortran f77 font-server foomaticdb gdbm gif gpm gtk gtk2 imlib jpeg kde gnome libg++ libwww mad mikmod motif mpeg ncurses nls oggvorbis opengl pam pdflib png python qt quicktime readline sdl slang spell ssl svga tcpd truetype truetype-fonts type1-fonts X xml2 xmms xv zlib"
 
 PROFILE_ARCH="xbox"
diff --git a/profiles/default-x86-1.4/make.defaults b/profiles/default-x86-1.4/make.defaults
index a894bca7d655..c38610275e84 100644
--- a/profiles/default-x86-1.4/make.defaults
+++ b/profiles/default-x86-1.4/make.defaults
@@ -1,17 +1,17 @@
 # Copyright 2002 Gentoo Foundation.
 # System-wide defaults for the gcc 3.2 Portage system
 
-#Experimental: trying to use these USE variables to build up from stage 2->3 
+#Experimental: trying to use these USE variables to build up from stage 2->3
 #thus eliminating the inherent fragility of using USE for this
 
 GRP_STAGE23_USE="ipv6 pam tcpd readline nls ssl gpm perl python berkdb acl ncurses"
 
-# Please avoid enabling things by default in here if possible. Understand any 
-# implications with core packages. For example, if "java" is in USE and db 
-# has a conditional dependency on java (which it does,) then a JDK will be 
+# Please avoid enabling things by default in here if possible. Understand any
+# implications with core packages. For example, if "java" is in USE and db
+# has a conditional dependency on java (which it does,) then a JDK will be
 # pulled in during *emerge system*!
 
-USE="x86 oss apm arts avi berkdb bitmap-fonts crypt cups encode fortran f77 font-server foomaticdb gdbm gif gpm gtk gtk2 imlib jpeg kde gnome libg++ libwww mad mikmod motif mpeg ncurses nls oggvorbis opengl pam pdflib png python qt quicktime readline sdl slang spell ssl svga tcpd truetype truetype-fonts type1-fonts X xml2 xmms xv zlib"
+USE="x86 oss apm arts avi berkdb bitmap-fonts crypt cups emboss encode fortran f77 font-server foomaticdb gdbm gif gpm gtk gtk2 imlib jpeg kde gnome libg++ libwww mad mikmod motif mpeg ncurses nls oggvorbis opengl pam pdflib png python qt quicktime readline sdl slang spell ssl svga tcpd truetype truetype-fonts type1-fonts X xml2 xmms xv zlib"
 
 ARCH="x86"
 ACCEPT_KEYWORDS="x86"
diff --git a/profiles/default-x86-1.4/use.defaults b/profiles/default-x86-1.4/use.defaults
index 4559d5c166ca..fd6ef79f53ac 100644
--- a/profiles/default-x86-1.4/use.defaults
+++ b/profiles/default-x86-1.4/use.defaults
@@ -2,7 +2,7 @@
 #mmx
 #3dnow
 #odbc
-#fbcon		
+#fbcon
 #oss
 #libg++
 #objprelink
@@ -20,7 +20,7 @@ slang		sys-libs/slang
 readline	sys-libs/readline
 arts		kde-base/arts
 tetex		app-text/tetex
-aalib		media-libs/aalib	
+aalib		media-libs/aalib
 nas		media-libs/nas
 bonobo		gnome-base/bonobo
 svga		media-libs/svgalib
@@ -55,5 +55,6 @@ ldap		net-nds/openldap
 snmp		net-analyzer/ucd-snmp
 cdr		app-cdr/cdrtools
 scanner		media-gfx/sane-backends
+emboss		sci-biology/emboss
 
 
diff --git a/profiles/default-x86-2004.0/make.defaults b/profiles/default-x86-2004.0/make.defaults
index a894bca7d655..c38610275e84 100644
--- a/profiles/default-x86-2004.0/make.defaults
+++ b/profiles/default-x86-2004.0/make.defaults
@@ -1,17 +1,17 @@
 # Copyright 2002 Gentoo Foundation.
 # System-wide defaults for the gcc 3.2 Portage system
 
-#Experimental: trying to use these USE variables to build up from stage 2->3 
+#Experimental: trying to use these USE variables to build up from stage 2->3
 #thus eliminating the inherent fragility of using USE for this
 
 GRP_STAGE23_USE="ipv6 pam tcpd readline nls ssl gpm perl python berkdb acl ncurses"
 
-# Please avoid enabling things by default in here if possible. Understand any 
-# implications with core packages. For example, if "java" is in USE and db 
-# has a conditional dependency on java (which it does,) then a JDK will be 
+# Please avoid enabling things by default in here if possible. Understand any
+# implications with core packages. For example, if "java" is in USE and db
+# has a conditional dependency on java (which it does,) then a JDK will be
 # pulled in during *emerge system*!
 
-USE="x86 oss apm arts avi berkdb bitmap-fonts crypt cups encode fortran f77 font-server foomaticdb gdbm gif gpm gtk gtk2 imlib jpeg kde gnome libg++ libwww mad mikmod motif mpeg ncurses nls oggvorbis opengl pam pdflib png python qt quicktime readline sdl slang spell ssl svga tcpd truetype truetype-fonts type1-fonts X xml2 xmms xv zlib"
+USE="x86 oss apm arts avi berkdb bitmap-fonts crypt cups emboss encode fortran f77 font-server foomaticdb gdbm gif gpm gtk gtk2 imlib jpeg kde gnome libg++ libwww mad mikmod motif mpeg ncurses nls oggvorbis opengl pam pdflib png python qt quicktime readline sdl slang spell ssl svga tcpd truetype truetype-fonts type1-fonts X xml2 xmms xv zlib"
 
 ARCH="x86"
 ACCEPT_KEYWORDS="x86"
diff --git a/profiles/default-x86-2004.0/use.defaults b/profiles/default-x86-2004.0/use.defaults
index 4559d5c166ca..fd6ef79f53ac 100644
--- a/profiles/default-x86-2004.0/use.defaults
+++ b/profiles/default-x86-2004.0/use.defaults
@@ -2,7 +2,7 @@
 #mmx
 #3dnow
 #odbc
-#fbcon		
+#fbcon
 #oss
 #libg++
 #objprelink
@@ -20,7 +20,7 @@ slang		sys-libs/slang
 readline	sys-libs/readline
 arts		kde-base/arts
 tetex		app-text/tetex
-aalib		media-libs/aalib	
+aalib		media-libs/aalib
 nas		media-libs/nas
 bonobo		gnome-base/bonobo
 svga		media-libs/svgalib
@@ -55,5 +55,6 @@ ldap		net-nds/openldap
 snmp		net-analyzer/ucd-snmp
 cdr		app-cdr/cdrtools
 scanner		media-gfx/sane-backends
+emboss		sci-biology/emboss
 
 
diff --git a/profiles/default-x86-2004.2/make.defaults b/profiles/default-x86-2004.2/make.defaults
index e0d92e01f94d..1a0f1e8396b6 100644
--- a/profiles/default-x86-2004.2/make.defaults
+++ b/profiles/default-x86-2004.2/make.defaults
@@ -1,17 +1,17 @@
 # Copyright 2002-2004 Gentoo Foundation.
 # System-wide defaults for the >=gcc 3.2 Portage system
 
-#Experimental: trying to use these USE variables to build up from stage 2->3 
+#Experimental: trying to use these USE variables to build up from stage 2->3
 #thus eliminating the inherent fragility of using USE for this
 
 GRP_STAGE23_USE="ipv6 pam tcpd readline nls ssl gpm perl python berkdb acl ncurses"
 
-# Please avoid enabling things by default in here if possible. Understand any 
-# implications with core packages. For example, if "java" is in USE and db 
-# has a conditional dependency on java (which it does,) then a JDK will be 
+# Please avoid enabling things by default in here if possible. Understand any
+# implications with core packages. For example, if "java" is in USE and db
+# has a conditional dependency on java (which it does,) then a JDK will be
 # pulled in during *emerge system*!
 
-USE="x86 oss apm arts avi berkdb bitmap-fonts crypt cups encode fortran f77 font-server foomaticdb gdbm gif gpm gtk gtk2 imlib jpeg kde gnome libg++ libwww mad mikmod motif mpeg ncurses nls oggvorbis opengl pam pdflib png python qt quicktime readline sdl slang spell ssl svga tcpd truetype truetype-fonts type1-fonts X xml2 xmms xv zlib"
+USE="x86 oss apm arts avi berkdb bitmap-fonts crypt cups emboss encode fortran f77 font-server foomaticdb gdbm gif gpm gtk gtk2 imlib jpeg kde gnome libg++ libwww mad mikmod motif mpeg ncurses nls oggvorbis opengl pam pdflib png python qt quicktime readline sdl slang spell ssl svga tcpd truetype truetype-fonts type1-fonts X xml2 xmms xv zlib"
 
 ARCH="x86"
 ACCEPT_KEYWORDS="x86"
diff --git a/profiles/default-x86-2004.2/use.defaults b/profiles/default-x86-2004.2/use.defaults
index 4559d5c166ca..fd6ef79f53ac 100644
--- a/profiles/default-x86-2004.2/use.defaults
+++ b/profiles/default-x86-2004.2/use.defaults
@@ -2,7 +2,7 @@
 #mmx
 #3dnow
 #odbc
-#fbcon		
+#fbcon
 #oss
 #libg++
 #objprelink
@@ -20,7 +20,7 @@ slang		sys-libs/slang
 readline	sys-libs/readline
 arts		kde-base/arts
 tetex		app-text/tetex
-aalib		media-libs/aalib	
+aalib		media-libs/aalib
 nas		media-libs/nas
 bonobo		gnome-base/bonobo
 svga		media-libs/svgalib
@@ -55,5 +55,6 @@ ldap		net-nds/openldap
 snmp		net-analyzer/ucd-snmp
 cdr		app-cdr/cdrtools
 scanner		media-gfx/sane-backends
+emboss		sci-biology/emboss
 
 
diff --git a/profiles/gcc34-x86-2004.2/make.defaults b/profiles/gcc34-x86-2004.2/make.defaults
index 129f9badd139..c2a3276b2499 100644
--- a/profiles/gcc34-x86-2004.2/make.defaults
+++ b/profiles/gcc34-x86-2004.2/make.defaults
@@ -1,17 +1,17 @@
 # Copyright 2002-2004 Gentoo Foundation.
 # System-wide defaults for the >=gcc 3.2 Portage system
 
-#Experimental: trying to use these USE variables to build up from stage 2->3 
+#Experimental: trying to use these USE variables to build up from stage 2->3
 #thus eliminating the inherent fragility of using USE for this
 
 GRP_STAGE23_USE="ipv6 pam tcpd readline nls ssl gpm perl python berkdb acl ncurses"
 
-# Please avoid enabling things by default in here if possible. Understand any 
-# implications with core packages. For example, if "java" is in USE and db 
-# has a conditional dependency on java (which it does,) then a JDK will be 
+# Please avoid enabling things by default in here if possible. Understand any
+# implications with core packages. For example, if "java" is in USE and db
+# has a conditional dependency on java (which it does,) then a JDK will be
 # pulled in during *emerge system*!
 
-USE="x86 oss apm arts avi berkdb bitmap-fonts crypt cups encode fortran f77 font-server foomaticdb gdbm gif gpm imlib jpeg libg++ libwww mad mikmod motif mpeg ncurses nls oggvorbis opengl pam pdflib png python quicktime readline sdl slang spell ssl svga tcpd truetype truetype-fonts type1-fonts X xml2 xmms xv zlib"
+USE="x86 oss apm arts avi berkdb bitmap-fonts crypt cups emboss encode fortran f77 font-server foomaticdb gdbm gif gpm imlib jpeg libg++ libwww mad mikmod motif mpeg ncurses nls oggvorbis opengl pam pdflib png python quicktime readline sdl slang spell ssl svga tcpd truetype truetype-fonts type1-fonts X xml2 xmms xv zlib"
 
 ARCH="x86"
 ACCEPT_KEYWORDS="x86"
diff --git a/profiles/gcc34-x86-2004.2/use.defaults b/profiles/gcc34-x86-2004.2/use.defaults
index 4559d5c166ca..fd6ef79f53ac 100644
--- a/profiles/gcc34-x86-2004.2/use.defaults
+++ b/profiles/gcc34-x86-2004.2/use.defaults
@@ -2,7 +2,7 @@
 #mmx
 #3dnow
 #odbc
-#fbcon		
+#fbcon
 #oss
 #libg++
 #objprelink
@@ -20,7 +20,7 @@ slang		sys-libs/slang
 readline	sys-libs/readline
 arts		kde-base/arts
 tetex		app-text/tetex
-aalib		media-libs/aalib	
+aalib		media-libs/aalib
 nas		media-libs/nas
 bonobo		gnome-base/bonobo
 svga		media-libs/svgalib
@@ -55,5 +55,6 @@ ldap		net-nds/openldap
 snmp		net-analyzer/ucd-snmp
 cdr		app-cdr/cdrtools
 scanner		media-gfx/sane-backends
+emboss		sci-biology/emboss
 
 
diff --git a/profiles/xbox-x86-2004.0/make.defaults b/profiles/xbox-x86-2004.0/make.defaults
index 696adf892263..79cde3e3cbbf 100644
--- a/profiles/xbox-x86-2004.0/make.defaults
+++ b/profiles/xbox-x86-2004.0/make.defaults
@@ -1,17 +1,17 @@
 # Copyright 2002 Gentoo Foundation.
 # System-wide defaults for the gcc 3.2 Portage system
 
-#Experimental: trying to use these USE variables to build up from stage 2->3 
+#Experimental: trying to use these USE variables to build up from stage 2->3
 #thus eliminating the inherent fragility of using USE for this
 
 GRP_STAGE23_USE="ipv6 pam tcpd readline nls ssl gpm perl python berkdb acl ncurses"
 
-# Please avoid enabling things by default in here if possible. Understand any 
-# implications with core packages. For example, if "java" is in USE and db 
-# has a conditional dependency on java (which it does,) then a JDK will be 
+# Please avoid enabling things by default in here if possible. Understand any
+# implications with core packages. For example, if "java" is in USE and db
+# has a conditional dependency on java (which it does,) then a JDK will be
 # pulled in during *emerge system*!
 
-USE="x86 oss apm arts avi berkdb bitmap-fonts crypt cups encode font-server foomaticdb gdbm gif gpm gtk gtk2 imlib jpeg kde gnome libg++ libwww mad mikmod motif mpeg ncurses nls oggvorbis opengl pam pdflib png python qt quicktime readline sdl slang spell ssl svga tcpd truetype truetype-fonts type1-fonts X xml2 xmms xv zlib"
+USE="x86 oss apm arts avi berkdb bitmap-fonts crypt cups emboss encode font-server foomaticdb gdbm gif gpm gtk gtk2 imlib jpeg kde gnome libg++ libwww mad mikmod motif mpeg ncurses nls oggvorbis opengl pam pdflib png python qt quicktime readline sdl slang spell ssl svga tcpd truetype truetype-fonts type1-fonts X xml2 xmms xv zlib"
 
 ARCH="x86"
 PROFILE_ARCH="xbox"
diff --git a/profiles/xbox-x86-2004.0/use.defaults b/profiles/xbox-x86-2004.0/use.defaults
index 4559d5c166ca..fd6ef79f53ac 100644
--- a/profiles/xbox-x86-2004.0/use.defaults
+++ b/profiles/xbox-x86-2004.0/use.defaults
@@ -2,7 +2,7 @@
 #mmx
 #3dnow
 #odbc
-#fbcon		
+#fbcon
 #oss
 #libg++
 #objprelink
@@ -20,7 +20,7 @@ slang		sys-libs/slang
 readline	sys-libs/readline
 arts		kde-base/arts
 tetex		app-text/tetex
-aalib		media-libs/aalib	
+aalib		media-libs/aalib
 nas		media-libs/nas
 bonobo		gnome-base/bonobo
 svga		media-libs/svgalib
@@ -55,5 +55,6 @@ ldap		net-nds/openldap
 snmp		net-analyzer/ucd-snmp
 cdr		app-cdr/cdrtools
 scanner		media-gfx/sane-backends
+emboss		sci-biology/emboss