diff options
| author |   Justin Lecher <jlec@gentoo.org> | 2015-05-27 16:32:12 +0000 |
|---|---|---|
| committer | Justin Lecher <jlec@gentoo.org> | 2015-05-27 16:32:12 +0000 |
| commit | 982ce77051dbc683f19e8c80bde15d907f357840 (patch) | |
| tree | 31596e87218c9a9f51774f8119ee90d94e2020b5 /sci-biology/bioperl-db | |
| parent | Drop vulnerable versions for security bug 546722 (diff) | |
| download | historical-982ce77051dbc683f19e8c80bde15d907f357840.tar.gz historical-982ce77051dbc683f19e8c80bde15d907f357840.tar.bz2 historical-982ce77051dbc683f19e8c80bde15d907f357840.zip | |
Drop old
Package-Manager: portage-2.2.20/cvs/Linux x86_64
Manifest-Sign-Key: 0xE9402A79B03529A2!
Diffstat (limited to 'sci-biology/bioperl-db')
| -rw-r--r-- | sci-biology/bioperl-db/ChangeLog | 5 | ||||
| -rw-r--r-- | sci-biology/bioperl-db/Manifest | 36 | ||||
| -rw-r--r-- | sci-biology/bioperl-db/bioperl-db-1.6.0.ebuild | 37 |
3 files changed, 22 insertions, 56 deletions
diff --git a/sci-biology/bioperl-db/ChangeLog b/sci-biology/bioperl-db/ChangeLog index e86d0ff22816..f9dfa92bd846 100644 --- a/sci-biology/bioperl-db/ChangeLog +++ b/sci-biology/bioperl-db/ChangeLog @@ -1,6 +1,9 @@ # ChangeLog for sci-biology/bioperl-db # Copyright 1999-2015 Gentoo Foundation; Distributed under the GPL v2 -# $Header: /var/cvsroot/gentoo-x86/sci-biology/bioperl-db/ChangeLog,v 1.13 2015/05/27 10:14:31 ago Exp $ +# $Header: /var/cvsroot/gentoo-x86/sci-biology/bioperl-db/ChangeLog,v 1.14 2015/05/27 16:28:25 jlec Exp $ + + 27 May 2015; Justin Lecher <jlec@gentoo.org> -bioperl-db-1.6.0.ebuild: + Drop old 27 May 2015; Agostino Sarubbo <ago@gentoo.org> bioperl-db-1.6.9.ebuild: Stable for amd64, wrt bug #539426 diff --git a/sci-biology/bioperl-db/Manifest b/sci-biology/bioperl-db/Manifest index e557d7f7005d..7b32a134d9d4 100644 --- a/sci-biology/bioperl-db/Manifest +++ b/sci-biology/bioperl-db/Manifest @@ -1,27 +1,27 @@ -----BEGIN PGP SIGNED MESSAGE----- -Hash: SHA256 +Hash: SHA512 DIST BioPerl-DB-1.006900.tar.gz 492799 SHA256 50df2447b7f3e26aebcf02ed7344d3ef562c3f5393c1584a8ae086185c8c9139 SHA512 e06b8b9aa4188a83128f910d7b4a031f69d36f75e4f2d7210357366379024ef39b58eca97112b5b419f141c82b7518086273cc97c9637382ee5e0ddb9ce28746 WHIRLPOOL b484ce9f464a7189e5b2fffd6facdd426e8b9009ffca5e1661986490bc45dc0269faec5e9eeebdb23ec5c706f62a670fbb6bfc5a60b11c268c7e6f34bf1f03f2 -DIST BioPerl-db-1.6.0.tar.bz2 296041 SHA256 81710b9c6d021511b8ad19d106309f76ef3111015873a56af9b109902d24a699 -EBUILD bioperl-db-1.6.0.ebuild 935 SHA256 67841aed2cdc99f42d9596dbdafbac980594d71a455ddbd370167095704ac657 SHA512 7ec3027c834c1a0704ba8e101da080ef1416da68ae0eabe089231889806eb15fc7a0b6f4f533a120b9b88ea5a3b47c24b4f21d7abe00d0ed8c4d21af087e47c3 WHIRLPOOL 4934f5410d82387bdb115a2ecc018f08b3eaf9f26c094ee78d909fc20484bdaa915f71e9dcc6f624688476e7ed3c0f460c62a91fda01b56c5c26decde2e15765 EBUILD bioperl-db-1.6.9.ebuild 756 SHA256 e847714cab8f2dfb41f479f35ea19d824bbdc40b0e9c27ef7de963f984f65b79 SHA512 fd11cf66e4c6d8de8fb4bda44169786f2d3cb4ee3fe780b59c3edccc8c24d2761bbaf79cfd7c6c07dbde22a6a40dbb7d79e20e8d3ad4dbd9602ab012df7cbf51 WHIRLPOOL 038110f8043bb64a7ae43e4f1af65b9494f1a3a5508b3f5d880280eed80dc94d45c11a3551ddbcfceb1062465106ad9353896da66b5a5fe80b24c95bee6a45d4 EBUILD bioperl-db-9999-r1.ebuild 975 SHA256 b6e138022894860c8b40bb8c1341dd8d031c41b43305f8bab9f3261c72b8bebb SHA512 582954d290ee5b6eb8decad3d2f18f95e2ee9280f909be1ca4222f12fe016d03e47841b5ce66bd1c12c85a64b46e9cf19836b8501d23e6157a909daabcbc9945 WHIRLPOOL 2500389084e7ae3937de7d2676f823f61793cc86849acb91c678e2623723bde36d6cb84c42dccde2a95352291515dcc499b37311e0b47fd67eeb34be824bf94b -MISC ChangeLog 2038 SHA256 4264a6c1c100f7a45c3beddd855d55c55a6ab61137e7804e9650f5274acf51f8 SHA512 83933e58dc2c1a4cca7227d400347c3bb36ee3db7ef6f2feaddfdf3fc4f5108420396de10c507cce7538c71edab9028bc8d4f2785c000e592371dd739f834e5f WHIRLPOOL 15ffb7ab3e4b69555bb52ca3440520774e7e82e33de35727c64bfa18da91aac468c1ad612f763f9fe9785feab5b8239d668c9953ceef425c7ef6b29001db5d4d +MISC ChangeLog 2124 SHA256 40d7ea8d6fa77f96dc6524056b81095a02eb5179c2b20fbaa15e4e7f34e80b23 SHA512 cbf5bfe096f3268147b8e71fa6976a23b731fe0adb893dced44555461dbfc697794d95cc03caf732b2b61aa688ce9ec24ce77a60ac9c293e5792cf06d2e68641 WHIRLPOOL 256d943291404df636510480de61f47feb771a1351b5b74d90cd32c8b7aa8eadc7d5ec2306b19d11d90d45c4ac5caaac7e1819ca3d0fb527923cb9d9e3dbc365 MISC metadata.xml 243 SHA256 caaade52752dd9332b4b9a7d233b1ea13357b98591091b09297f57407d9bf55d SHA512 43432ecd4c8101878bf4f42adf279128df74e0d0129c0f178658104d5c60e9938f270cbdd8760d0e000b95a11fcf7d1cba8a58ac0af7a1e595bdfd4761e84dac WHIRLPOOL 7de11b5857df86f15986efd61327090d4112ee9b975680dde9db7c716e760623e2ca114d781205f978aa175657ad4e54ad26a1e15d820c43b479b4957d9030c9 -----BEGIN PGP SIGNATURE----- -Version: GnuPG v2 +Version: GnuPG v2.0 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Foundation -# Distributed under the terms of the GNU General Public License v2 -# $Header: /var/cvsroot/gentoo-x86/sci-biology/bioperl-db/bioperl-db-1.6.0.ebuild,v 1.5 2014/08/09 22:47:12 zlogene Exp $ - -EAPI="5" - -inherit perl-module - -DESCRIPTION="Perl tools for bioinformatics - Perl API that accesses the BioSQL schema" -HOMEPAGE="http://www.bioperl.org/" -SRC_URI="http://bioperl.org/DIST/BioPerl-db-${PV}.tar.bz2" - -LICENSE="Artistic GPL-2" -SLOT="0" -KEYWORDS="amd64 x86" -IUSE="" - -CDEPEND=">=sci-biology/bioperl-${PV} - dev-perl/DBI - sci-biology/biosql" -DEPEND="virtual/perl-Module-Build - ${CDEPEND}" -RDEPEND="${CDEPEND}" - -S="${WORKDIR}/BioPerl-db-${PV}" - -src_configure() { - # This disables tests. TODO: Enable tests - sed -i -e '/biosql_conf();/d' \ - -e '/skip.*DBHarness.biosql.conf/d' "${S}/Build.PL" || die - perl-module_src_configure -} - -src_install() { - mydoc="AUTHORS BUGS FAQ" - perl-module_src_install -} |