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authorAndrey Kislyuk <weaver@gentoo.org>2009-09-11 02:02:25 +0000
committerAndrey Kislyuk <weaver@gentoo.org>2009-09-11 02:02:25 +0000
commit052c330e2fff41b3dc7c508f3de14b9c9f4aa1a0 (patch)
tree7aec82bf362edd36964002a2ceea503a30ba18e6 /sci-biology/phylip
parent[taglib-extras] Bumped to version 0.1.7. (diff)
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Version bump
Package-Manager: portage-2.2_rc30/cvs/Linux x86_64
Diffstat (limited to 'sci-biology/phylip')
-rw-r--r--sci-biology/phylip/ChangeLog7
-rw-r--r--sci-biology/phylip/Manifest6
-rw-r--r--sci-biology/phylip/metadata.xml4
-rw-r--r--sci-biology/phylip/phylip-3.69.ebuild47
4 files changed, 61 insertions, 3 deletions
diff --git a/sci-biology/phylip/ChangeLog b/sci-biology/phylip/ChangeLog
index ad2513e607b1..2de0eb86fe4c 100644
--- a/sci-biology/phylip/ChangeLog
+++ b/sci-biology/phylip/ChangeLog
@@ -1,6 +1,11 @@
# ChangeLog for sci-biology/phylip
# Copyright 1999-2009 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/phylip/ChangeLog,v 1.36 2009/09/01 19:20:56 ribosome Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/phylip/ChangeLog,v 1.37 2009/09/11 02:02:25 weaver Exp $
+
+*phylip-3.69 (10 Sep 2009)
+
+ 10 Sep 2009; Andrey Kislyuk <weaver@gentoo.org> +phylip-3.69.ebuild:
+ Version bump
01 Sep 2009; Olivier Fisette <ribosome@gentoo.org> -phylip-3.65-r1.ebuild,
-phylip-3.66.ebuild:
diff --git a/sci-biology/phylip/Manifest b/sci-biology/phylip/Manifest
index 4ac21f1441d6..f4aa39727cb0 100644
--- a/sci-biology/phylip/Manifest
+++ b/sci-biology/phylip/Manifest
@@ -1,7 +1,9 @@
AUX README.Gentoo 643 RMD160 7777b1b507126f9d7ac01a0fc39e4eceac2e0381 SHA1 431f528545f949ec8687175808bbdabcfbd8c60e SHA256 d8a737f2ca6e0366fcebb96fbc9e12200b6402fea4c4f71696f4d9175980dfbd
DIST phylip-3.67.tar.gz 1467526 RMD160 5636707b2585077a793c71fa81f255dfd8708100 SHA1 7c2ef697250d7d78e2d0672af60190129ba10161 SHA256 089f31c0519b1af162628c02d4ff78570b42cd261f39b87c6406733f2f759b5d
DIST phylip-3.68.tar.gz 1473441 RMD160 5f352457763c000f7dec991262bfcf4c94ac7057 SHA1 d3de831b0b8757581f240ff6b1e7ca750251c5b7 SHA256 30e4eaae0eff1d88a479af1ff5c8a9ef8167c86b83c1536327cd9d05ce941531
+DIST phylip-3.69.tar.gz 1511935 RMD160 a39080b959452957576c9b7daa2b9e7f25bef212 SHA1 ada364d1a588935ff59a23c08337d9dd99109c5e SHA256 27947ce8dab4416e4823db38b3d1b0bf17bc545b6907cf09dcf6177df94c1a8f
EBUILD phylip-3.67.ebuild 1440 RMD160 1794062eaa5e0db4cae5d95e078b2135ced49b42 SHA1 388b455569c6b84678905f7fb92598386f4fc9a3 SHA256 738f79642a25e77ad3481214269d751154b6fe2f5abd691d1dbc5ee7553556b9
EBUILD phylip-3.68.ebuild 1445 RMD160 e98f5c6883f9f59152344911ec55980e343e83cc SHA1 845d8c7390eaa6bd6e8aa3eec7e604c305f43fad SHA256 9089fcb5f74f452182cdf0c29cd2d2f4b113993dc7d3760a50d35158cf5d5b2e
-MISC ChangeLog 5807 RMD160 cd6dba94a887d844b0ed3d33db7cd282d2771713 SHA1 c6aaab6223b5504041ac6704eada1d22f3dae31c SHA256 c4853166502b525f2814e4dc0b17df7bcf45186233e88f55dfb64e0d455ddf5f
-MISC metadata.xml 165 RMD160 b247a16b6552b292d1249ff4e8ea5060ad2c4372 SHA1 a9f91a3a303f4c85430e21eca09913e1c9426366 SHA256 560c375768c8e164d954d61924f110da785b4771012cb830963eaa267a319132
+EBUILD phylip-3.69.ebuild 1445 RMD160 6395918f2de0963446d8e8102db387f5707f8600 SHA1 bc1e8160402b01a01684e8682f5732cc00855353 SHA256 e6aafdd15ef88aa1bb8be6982a44195541d3f0015c4bf93aabd21464fe630b08
+MISC ChangeLog 5920 RMD160 828ff6e2727527452355ece4cd6f6ce077765f24 SHA1 03edb9a907efa09f06bd8d4c11dc331ef1b93e86 SHA256 bf56d1f293eb0186a48f398c7be63386157b22db8063a27c55f26729afbd8045
+MISC metadata.xml 259 RMD160 d9d81b67d635fabd81aef8ae0edf971211ae9072 SHA1 8e32f751c67ff891fa35405a2cf6fb33752d6eb1 SHA256 541c3fbcf299d9a8ccf4132ee61f9e53a5d737cefdaa6fdc77764d8d4c7f3110
diff --git a/sci-biology/phylip/metadata.xml b/sci-biology/phylip/metadata.xml
index d4648212cbad..3302123e5718 100644
--- a/sci-biology/phylip/metadata.xml
+++ b/sci-biology/phylip/metadata.xml
@@ -1,5 +1,9 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
+ <maintainer>
+ <email>weaver@gentoo.org</email>
+ <name>Andrey Kislyuk</name>
+ </maintainer>
<herd>sci-biology</herd>
</pkgmetadata>
diff --git a/sci-biology/phylip/phylip-3.69.ebuild b/sci-biology/phylip/phylip-3.69.ebuild
new file mode 100644
index 000000000000..829fc48c215e
--- /dev/null
+++ b/sci-biology/phylip/phylip-3.69.ebuild
@@ -0,0 +1,47 @@
+# Copyright 1999-2009 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/phylip/phylip-3.69.ebuild,v 1.1 2009/09/11 02:02:25 weaver Exp $
+
+inherit toolchain-funcs
+
+DESCRIPTION="PHYLIP - The PHYLogeny Inference Package"
+LICENSE="freedist"
+HOMEPAGE="http://evolution.genetics.washington.edu/phylip.html"
+SRC_URI="http://evolution.gs.washington.edu/${PN}/download/${P}.tar.gz"
+
+SLOT="0"
+IUSE=""
+KEYWORDS="~amd64 ~ppc ~x86"
+
+RDEPEND="x11-libs/libXaw"
+
+DEPEND="${RDEPEND}
+ x11-proto/xproto"
+
+S="${WORKDIR}/${P}/src"
+
+src_compile() {
+ sed -e "s/CFLAGS = -O3 -fomit-frame-pointer/CFLAGS = ${CFLAGS}/" \
+ -e "s/CC = cc/CC = $(tc-getCC)/" \
+ -e "s/DC = cc/DC = $(tc-getCC)/" \
+ -i Makefile || die "Patching Makefile failed."
+ mkdir ../fonts
+ emake -j1 all put || die "Compilation failed."
+ mv ../exe/font* ../fonts || die "Font move failed."
+ mv ../exe/factor ../exe/factor-${PN} || die "Renaming factor failed."
+}
+
+src_install() {
+ cd "${WORKDIR}/${P}"
+
+ dobin exe/* || die "Failed to install programs."
+
+ dodoc "${FILESDIR}"/README.Gentoo || die "Failed to install Gentoo notes."
+
+ dohtml phylip.html || die "Failed to install HTML documentation index."
+ insinto /usr/share/doc/${PF}/html/doc
+ doins doc/* || die "Failed to install HTML documentation."
+
+ insinto /usr/share/${PN}/fonts
+ doins fonts/* || die "Fonts installation failed."
+}