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authorOlivier Fisette <ribosome@gentoo.org>2008-08-26 18:08:55 +0000
committerOlivier Fisette <ribosome@gentoo.org>2008-08-26 18:08:55 +0000
commit19ded4951ee30237a99e53ff6ff8f72efdc0aee2 (patch)
treef0a30cf673a10377d37ff3a3f506edb3bead58a7 /sci-biology/rnaview
parentVersion bump, removed old. (diff)
downloadhistorical-19ded4951ee30237a99e53ff6ff8f72efdc0aee2.tar.gz
historical-19ded4951ee30237a99e53ff6ff8f72efdc0aee2.tar.bz2
historical-19ded4951ee30237a99e53ff6ff8f72efdc0aee2.zip
Added convenience env file.
Package-Manager: portage-2.1.4.4
Diffstat (limited to 'sci-biology/rnaview')
-rw-r--r--sci-biology/rnaview/ChangeLog10
-rw-r--r--sci-biology/rnaview/Manifest3
-rw-r--r--sci-biology/rnaview/rnaview-20040713-r1.ebuild43
3 files changed, 53 insertions, 3 deletions
diff --git a/sci-biology/rnaview/ChangeLog b/sci-biology/rnaview/ChangeLog
index 52e54cd95443..7419dff16e9b 100644
--- a/sci-biology/rnaview/ChangeLog
+++ b/sci-biology/rnaview/ChangeLog
@@ -1,6 +1,12 @@
# ChangeLog for sci-biology/rnaview
-# Copyright 1999-2007 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/rnaview/ChangeLog,v 1.10 2007/04/10 12:16:39 je_fro Exp $
+# Copyright 1999-2008 Gentoo Foundation; Distributed under the GPL v2
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/rnaview/ChangeLog,v 1.11 2008/08/26 18:08:55 ribosome Exp $
+
+*rnaview-20040713-r1 (26 Aug 2008)
+
+ 26 Aug 2008; Olivier Fisette <ribosome@gentoo.org>
+ +rnaview-20040713-r1.ebuild:
+ Added convenience env file.
10 Apr 2007; Jeff Gardner <je_fro@gentoo.org> rnaview-20040713.ebuild:
Added ~amd64.
diff --git a/sci-biology/rnaview/Manifest b/sci-biology/rnaview/Manifest
index bb6de589210a..1b53d3faf3a8 100644
--- a/sci-biology/rnaview/Manifest
+++ b/sci-biology/rnaview/Manifest
@@ -1,4 +1,5 @@
DIST rnaview-20040713.tar.bz2 433916 RMD160 1aa0a3dd7af24a543c00027b958bbaaedd0f163a SHA1 b87d6b6936f2942fadbd4e339632effd0835239e SHA256 0961779c83e247a4b04c02d90d3850e8c4c889b630194ea1516cbeb6c6dbad17
+EBUILD rnaview-20040713-r1.ebuild 1204 RMD160 6e3a2799bcded3fa8569a5e594cc42b78f028d7c SHA1 d8bb1fcba7ecc6216d1bc4c74af77e119d0ef874 SHA256 09c34d47b28b597b8afe2022c2e1bf0f3cd8d7ac93410696baac769a45316a4a
EBUILD rnaview-20040713.ebuild 953 RMD160 84b48d31ecf519973ee2b2fb840985a387987530 SHA1 51e3894d8e91a41b9d27c9c95e000b681a1db656 SHA256 bb72d245280de8c2d2f79bc8bb451d3db6283de58786e93d991cca8745f42f8d
-MISC ChangeLog 1393 RMD160 6bb8bcd208f8d1966368f4aa1ab77290e7c27b6d SHA1 73da99b7256a85c4984ad7e88fa2fa1791e5cc17 SHA256 111fd9a46b3a34bb21ec270c43984e80685366bfb7a522acb0edd6f277fb16b7
+MISC ChangeLog 1546 RMD160 996fdcfcbf59b6a739abb28c352150dff1cdb80d SHA1 ad0c65994d9fe39ea5d49c4e71a12c44be3d8cec SHA256 17a2463dd26fe698d7b26e55e22274dada93686e8588500f2605611fae06e46f
MISC metadata.xml 570 RMD160 e4eaa219425a7d2522fd1d148d6ea6bd4940a3cf SHA1 00a65e9b64e6e8a6071fec4abad0d41038872c81 SHA256 361679aa0f120fbb2370915ad12b84a7c1f707fd6c5de1da049d4c131986aea3
diff --git a/sci-biology/rnaview/rnaview-20040713-r1.ebuild b/sci-biology/rnaview/rnaview-20040713-r1.ebuild
new file mode 100644
index 000000000000..4bdf64dfd6c1
--- /dev/null
+++ b/sci-biology/rnaview/rnaview-20040713-r1.ebuild
@@ -0,0 +1,43 @@
+# Copyright 1999-2008 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/rnaview/rnaview-20040713-r1.ebuild,v 1.1 2008/08/26 18:08:55 ribosome Exp $
+
+inherit toolchain-funcs
+
+DESCRIPTION="Generates 2D displays of RNA/DNA secondary structures with tertiary interactions"
+HOMEPAGE="http://ndbserver.rutgers.edu/services/download/index.html"
+SRC_URI="mirror://gentoo/${P}.tar.bz2"
+LICENSE="public-domain"
+
+SLOT="0"
+KEYWORDS="~amd64 ~x86"
+IUSE=""
+
+src_unpack() {
+ unpack ${A}
+ cd "${S}"
+ sed -e "s/CC = cc/CC = $(tc-getCC)/" \
+ -e "s/CFLAGS =/CFLAGS = ${CFLAGS}/" \
+ -i Makefile || die
+}
+
+src_compile() {
+ make clean
+ make || die "Failed to build programs."
+ cd "${S}"/rnaml2ps
+ make clean
+ make || die "Failed to build rnaml2ps."
+ cd "${S}"/test
+ rm '.#t'
+}
+
+src_install() {
+ dobin bin/rnaview rnaml2ps/rnaml2ps || die "Failed to install programs."
+ dodoc README || die "Failed to install documentation."
+ mkdir -p "${D}"/usr/share/${PN}
+ cp -r BASEPARS test "${D}"/usr/share/${PN}
+ cat <<- EOF > 22rnaview
+ RNAVIEW="/usr/share/rnaview"
+ EOF
+ doenvd 22rnaview || die "Failed to install environment file."
+}