Import from Science overlay

Package-Manager: portage-2.2_rc20/cvs/Linux 2.6.26-gentoo-r4 x86_64

3 files changed, 57 insertions, 0 deletions

diff --git a/sci-biology/trf/ChangeLog b/sci-biology/trf/ChangeLog
new file mode 100644
index 000000000000..a7d6de7aa342
--- /dev/null
+++ b/sci-biology/trf/ChangeLog
@@ -0,0 +1,13 @@
+# ChangeLog for sci-biology/trf
+# Copyright 1999-2009 Gentoo Foundation; Distributed under the GPL v2
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/trf/ChangeLog,v 1.1 2009/02/27 00:11:33 weaver Exp $
+
+*trf-4.0 (26 Feb 2009)
+
+  26 Feb 2009; Andrey Kislyuk <weaver@gentoo.org> +metadata.xml,
+  +trf-4.0.ebuild:
+  Import from Science overlay
+
+  19 Feb 2009; weaver <weaver@gentoo.org> ChangeLog:
+  New package sci-biology/trf, ebuild written by me
+
diff --git a/sci-biology/trf/metadata.xml b/sci-biology/trf/metadata.xml
new file mode 100644
index 000000000000..3302123e5718
--- /dev/null
+++ b/sci-biology/trf/metadata.xml
@@ -0,0 +1,9 @@
+<?xml version="1.0" encoding="UTF-8"?>
+<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
+<pkgmetadata>
+	<maintainer>
+		<email>weaver@gentoo.org</email>
+		<name>Andrey Kislyuk</name>
+	</maintainer>
+	<herd>sci-biology</herd>
+</pkgmetadata>
diff --git a/sci-biology/trf/trf-4.0.ebuild b/sci-biology/trf/trf-4.0.ebuild
new file mode 100644
index 000000000000..a76010b6257a
--- /dev/null
+++ b/sci-biology/trf/trf-4.0.ebuild
@@ -0,0 +1,35 @@
+# Copyright 1999-2009 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/trf/trf-4.0.ebuild,v 1.1 2009/02/27 00:11:33 weaver Exp $
+
+inherit eutils
+
+DESCRIPTION="Tandem Repeats Finder"
+HOMEPAGE="http://tandem.bu.edu/trf/trf.html"
+SRC_URI="http://tandem.bu.edu/trf/downloads/trf400.linux.exe"
+
+LICENSE="as-is"
+SLOT="0"
+IUSE=""
+KEYWORDS="~amd64 ~x86"
+
+DEPEND=""
+RDEPEND=""
+# gtk? ( x11-libs/gtk+ ) x11-libs/pango[X]
+
+S="${WORKDIR}"
+
+src_unpack() {
+	cp "${DISTDIR}/trf400.linux.exe" "${S}"
+}
+
+src_install() {
+	exeinto /opt/${PN}
+	doexe trf400.linux.exe || die
+	dosym /opt/${PN}/trf400.linux.exe /usr/bin/trf || die
+	# GTK version (http://tandem.bu.edu/trf/downloads/trf400.linuxgtk.exe) has broken linking
+	#if use gtk; then
+	#	doexe trf400.linuxgtk.exe || die
+	#	make_desktop_entry /opt/${PN}/trf400.linuxgtk.exe "Tandem Repeats Finder" || die
+	#fi
+}