sci-biology/vienna-rna: Punt base.eclass

Package-Manager: portage-2.2.8/cvs/Linux x86_64
Manifest-Sign-Key: 0xB9D4F231BD1558AB!

3 files changed, 25 insertions, 24 deletions

diff --git a/sci-biology/vienna-rna/ChangeLog b/sci-biology/vienna-rna/ChangeLog
index e9e7e98b5fda..aa3ad8311b9c 100644
--- a/sci-biology/vienna-rna/ChangeLog
+++ b/sci-biology/vienna-rna/ChangeLog
@@ -1,6 +1,9 @@
 # ChangeLog for sci-biology/vienna-rna
-# Copyright 1999-2013 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/vienna-rna/ChangeLog,v 1.49 2013/09/05 19:44:48 mgorny Exp $
+# Copyright 1999-2014 Gentoo Foundation; Distributed under the GPL v2
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/vienna-rna/ChangeLog,v 1.50 2014/01/06 15:32:47 jlec Exp $
+
+  06 Jan 2014; Justin Lecher <jlec@gentoo.org> vienna-rna-1.8.5.ebuild:
+  Punt base.eclass
 
   05 Sep 2013; Michał Górny <mgorny@gentoo.org> vienna-rna-2.1.1.ebuild:
   Clean up PYTHON_COMPAT from old implementations.
diff --git a/sci-biology/vienna-rna/Manifest b/sci-biology/vienna-rna/Manifest
index bc161e7801b6..d01cd9cbae83 100644
--- a/sci-biology/vienna-rna/Manifest
+++ b/sci-biology/vienna-rna/Manifest
@@ -1,5 +1,5 @@
 -----BEGIN PGP SIGNED MESSAGE-----
-Hash: SHA256
+Hash: SHA512
 
 AUX vienna-rna-1.6.5-c-fixes.patch 728 SHA256 49955a6244eb3be73f8d2472f3a4f9b8d1f8f92ba11327961b901a2c1f1e24d8 SHA512 5c3694d595e8382a3946366ddae9be2556d4b772fbf20fc2c8612b707b3b8d5f797d5b04d1ed48966f8ec6eb9a846830c12d574293b05e016ad4eacf8196c122 WHIRLPOOL a73d73eed88a62257db1e3033382c0e1acaf110a634034b13c58e78818ffd22e18c96ea049af824037ebc77184ecc431d4a965f0cc03f3e6f6ff949e5bce6269
 AUX vienna-rna-1.7.2-LDFLAGS.patch 978 SHA256 0c7db17c7a1a8a075e26f6b98b19c84a3f98f9ecdaa06755e4e426fcb1b8ce8c SHA512 a5fea1fc9c969d2bde9094b8303ee5d0b77f0570107d403279bcc3884d2925f81789d3d08627caadf92f435bbf369721dbc95e1122bde5741340104526a532b2 WHIRLPOOL 82d3e59c9a399cd352f72477fc9803012ef288e3198b0c69e86ce184cfe75c1c824b149b6ea55771da88180d9d402e1d8ed8444aac1f1bcd9211ded54f15d917
@@ -16,26 +16,24 @@ AUX vienna-rna-2.1.1-prll.patch 885 SHA256 0438173aa9d336ae41d7024d66dd6b07c1bac
 AUX vienna-rna-2.1.1-setup.py 810 SHA256 035f9c8aff6b6bc575b089e48e79bffe7da093de499a1d88eb1785346025940a SHA512 57feac6d5701a25fcda01f93f506a422d4639595a7d0ef73575af88f283fabc3730a8ea3e116ccfd417b015611c813f08ff047c9e362eaa74d2ce275ae65f8b8 WHIRLPOOL 8d9eb802bb055e30992a9509c43638e5602d434c5237729d816833f3e10f858ead48fb228728c5842a9e09b678f85091fab32b976ca8db4cc023c4fad2382b85
 DIST ViennaRNA-1.8.5.tar.gz 1306792 SHA256 f4e2d94beaf77165e8321758e4ab0ad1c5d49879cefa12e48b07d09ed2d0ecf9 SHA512 3121bbeb476c1828f2238d32ab4fea724fd17d9108cb38ea76a73b64eda97a36689080faa6745a4cd369178239443eeb68621da0cd96beb55d2bd0b6cb0891de WHIRLPOOL e561f6e3506e85f54974d3bf9def910d404cdc94bb8e184933b90698a083c5c5e40510deec6486737081ca602b560b5409c79a21a517daa2b859c7430abc0fb6
 DIST ViennaRNA-2.1.1.tar.gz 5327215 SHA256 bfea440dface4562d5dfb0a1c83bf226c0697bb18aacae0dc84c555282cedebe SHA512 b272afa1146543b290db605debab2badbdbf04fcdfd6130ed3b10604255476b3472b184e9af8a0bbeaa0def266f1a167c125d6cfd02aa3f7ae463697dc5226d5 WHIRLPOOL 48b6bcd96b2ff2523ba00335cac7fe141b6ed7f037a3192e6c174297266d0f967492a67afaaa6c05f8b28fdc0eb7c9b72d0d9daba286b5dd3dca4456cc058b1f
-EBUILD vienna-rna-1.8.5.ebuild 2890 SHA256 088724bebfc184560535041ddd509d80459e3a3991b1efc7b095f74549b5e047 SHA512 d229dbb7dc2c44fd5181705747e26aa0d6944e17c9694b987d3d9d8a88532ca091c23ae65ad4f0f30f2a6e373e519ce22229fa19dc986d8e0cc6ecb6c3186499 WHIRLPOOL be125d58a63a000a2ab7d901e8adcdbcb811fe2f541d47360951de77bbfa896b305d13c744a70e8b123836ddcb45dbef8d266ef8d1749e94a65156ec69980245
+EBUILD vienna-rna-1.8.5.ebuild 2894 SHA256 2fa8a73b0119ae259a50a467e7ad219e5b43940a241fedbc2d1b60f679cce4ef SHA512 7240d39a6aca463c381c8ffbf50273cc01822d2bb8d8654a044b462d4f14efba175b29bbf7bafc1d0fd7a2dcf4bac5ac8d6e89b71f80586cb837186f6025e97c WHIRLPOOL 363bb606d1f3f436a77deaf7a42fb6797b67937770f7f58d744450216fdcf63ce6aa12ff748a30d7ace3ce499c8fbf3ac15f8fc1f721568396f2034014588043
 EBUILD vienna-rna-2.1.1.ebuild 2777 SHA256 22450a8453ab12a5c5bcc10437e2cb75009132f3ce2db457b2d503bb62dc7e33 SHA512 e6b32e9d03c00934f5ed0c70dd29da036eee5a222c91a76c21c234a887b8634b017e7581fee1b8368770ddc4861f7867b0d6a671215188389ed758dc2124b156 WHIRLPOOL d126e1370ebff4877f14f1d27cdebcb979163133c88205b4cc0cc3b222ff48fc90b3d45fa3f9619b2861b9c295c84fe1a29950bd8a320ff4ee417997b253fce6
-MISC ChangeLog 7682 SHA256 42a7606ed2562b05075d1636fff83b56694d2cd426ad8365fe024ccce9f8a464 SHA512 39ba94c4da5064d9a6078249a82601f74d55383e21e7aca92253eac71e73e267262cd555ebfc35a7929db2e2c6b0008652fc3b3d5a8ee8d8b12b2c67d7f28a4d WHIRLPOOL c1092b3af695ee290db721b22a55b2b81d495c9eaf3bb57d3349508b070cb69f79b401e4e352b01e417955cdabf0528d2dbea2807c9fae1fd780503f2245bc6a
+MISC ChangeLog 7772 SHA256 2bb29b3ecdf6dfbf621a40ab9b0f84bc2faac0fa5399888eabe779d904ea1e57 SHA512 eb3332b7f579ca0c1a56089a48c9a77250224b2f860889609d24bca1fd9161ea1288829802e7ef895777d567967ec118d55a6c5e34d6631fe03d27ad7a3019cd WHIRLPOOL 5f3c8868818184b078c3b5778a3eb2bc20f3b55ec09462f2c39755c19b6286ddf3facc584f7d3e94efd823c3d76c983cd1797b92582d0d79537ae5987f7d093e
 MISC metadata.xml 1214 SHA256 7b2e9d412019304d74ae0175f40767d78b1668ff0173bb07618e23478337b165 SHA512 0c86849ca974997da0f4ef044a07d1eb963a02889b2a7cbf4e0b2e5dac09a6da58eaf1e492e387f0c059f1c8517f27a122a16c4fd8e92b54cf3a1e3ff6707def WHIRLPOOL c96b3021b444150a580ff9923d37a6e50ba2059d5e4bf8d812a60ff7216c338e974f94d2525d494487bbcd6c83f78580afde89a58ce85d7b0dfab7cad7502ea3
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diff --git a/sci-biology/vienna-rna/vienna-rna-1.8.5.ebuild b/sci-biology/vienna-rna/vienna-rna-1.8.5.ebuild
index 9880856273ca..da45a4cf3cf9 100644
--- a/sci-biology/vienna-rna/vienna-rna-1.8.5.ebuild
+++ b/sci-biology/vienna-rna/vienna-rna-1.8.5.ebuild
@@ -1,6 +1,6 @@
-# Copyright 1999-2013 Gentoo Foundation
+# Copyright 1999-2014 Gentoo Foundation
 # Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/vienna-rna/vienna-rna-1.8.5.ebuild,v 1.10 2013/01/31 10:57:35 jlec Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/vienna-rna/vienna-rna-1.8.5.ebuild,v 1.11 2014/01/06 15:32:47 jlec Exp $
 
 EAPI="3"
 
@@ -39,7 +39,7 @@ PATCHES=(
 )
 
 src_prepare() {
-	base_src_prepare
+	epatch ${PATCHES[@]}
 	sed -i 's/ getline/ v_getline/' Readseq/ureadseq.c || die
 	sed -i 's/@PerlCmd@ Makefile.PL/& INSTALLDIRS=vendor/' Perl/Makefile.am || die