diff options
| author |   Mikle Kolyada <zlogene@gentoo.org> | 2014-08-09 22:49:51 +0000 |
|---|---|---|
| committer | Mikle Kolyada <zlogene@gentoo.org> | 2014-08-09 22:49:51 +0000 |
| commit | 1322d83d83a7f4eb5b1a3c185cbefad9424efde6 (patch) | |
| tree | 7b09aad1643f5b8de859faa9b345806da211c5a5 /sci-biology | |
| parent | New snapshot to fix SIGSEGV in LibMP4V2Handler (diff) | |
| download | historical-1322d83d83a7f4eb5b1a3c185cbefad9424efde6.tar.gz historical-1322d83d83a7f4eb5b1a3c185cbefad9424efde6.tar.bz2 historical-1322d83d83a7f4eb5b1a3c185cbefad9424efde6.zip | |
Bump to EAPI=5 (bug #478714)
Package-Manager: portage-2.2.8-r1/cvs/Linux x86_64
Manifest-Sign-Key: 0xC42EB5D6
Diffstat (limited to 'sci-biology')
20 files changed, 99 insertions, 90 deletions
diff --git a/sci-biology/bioperl-db/ChangeLog b/sci-biology/bioperl-db/ChangeLog index 0f382e01ef18..a5a879042224 100644 --- a/sci-biology/bioperl-db/ChangeLog +++ b/sci-biology/bioperl-db/ChangeLog @@ -1,6 +1,10 @@ # ChangeLog for sci-biology/bioperl-db -# Copyright 1999-2013 Gentoo Foundation; Distributed under the GPL v2 -# $Header: /var/cvsroot/gentoo-x86/sci-biology/bioperl-db/ChangeLog,v 1.10 2013/03/11 14:42:50 jlec Exp $ +# Copyright 1999-2014 Gentoo Foundation; Distributed under the GPL v2 +# $Header: /var/cvsroot/gentoo-x86/sci-biology/bioperl-db/ChangeLog,v 1.11 2014/08/09 22:47:12 zlogene Exp $ + + 09 Aug 2014; Mikle Kolyada <zlogene@gentoo.org> bioperl-db-1.6.0.ebuild, + bioperl-db-1.6.9.ebuild, bioperl-db-9999-r1.ebuild: + Bump to EAPI=5 (bug #478714) 11 Mar 2013; Justin Lecher <jlec@gentoo.org> metadata.xml: Drop Andrey as maintainer so that bugs get assigned to sci-biology directly @@ -43,4 +47,3 @@ 16 Mar 2009; Andrey Kislyuk <weaver@gentoo.org> +metadata.xml, +bioperl-db-1.6.0.ebuild, +bioperl-db-9999.ebuild: New package, dependency for sci-biology/bioperl. Ebuild written by me. - diff --git a/sci-biology/bioperl-db/Manifest b/sci-biology/bioperl-db/Manifest index 4e6036b511e4..c3b1d1dd00ea 100644 --- a/sci-biology/bioperl-db/Manifest +++ b/sci-biology/bioperl-db/Manifest @@ -3,15 +3,17 @@ Hash: SHA256 DIST BioPerl-DB-1.006900.tar.gz 492799 SHA256 50df2447b7f3e26aebcf02ed7344d3ef562c3f5393c1584a8ae086185c8c9139 DIST BioPerl-db-1.6.0.tar.bz2 296041 SHA256 81710b9c6d021511b8ad19d106309f76ef3111015873a56af9b109902d24a699 -EBUILD bioperl-db-1.6.0.ebuild 934 SHA256 09aadf2bd39f97517e6743bcc179812133f7f35bf5feabf3dd21f5a638c374a5 SHA512 90e54eef29ad61a639ced3f413a2763cef8779b93385fba3e84c3a118efc91cc1477ccc8b3b16e712bd164ae6bf90229d6dce58951a2f75eec493fe3d320e6e6 WHIRLPOOL c96c4fce56ad9e6641039458000165c4b7f228188709e2cb278c025632192a594a0cd234002827af5d38dc58d0e7ac3a7b5cf3eb5eb02d8773a0822afcc8beb2 -EBUILD bioperl-db-1.6.9.ebuild 759 SHA256 e627d73fe0df0a4c05183d5d50258846b978d3c54d3be4e81cec8522c15cbe3f SHA512 2efb938888b10b3b70f04431294a18747a2345372b45efe1967605de9e6bf2c7a36f01cebfcb4484c5ad088e31e4659a891abd30450a4c87cf33d5e3c1e0718d WHIRLPOOL 5ede83bad51e62920f1baa04872637e95cf7da4e669fa9eeff04187dd61440d8aaa561267df1e874fd79c48b9458f3e2408be4aab0754913adf72f1654089f2c -EBUILD bioperl-db-9999-r1.ebuild 974 SHA256 5f971ba06d967c42747e0d701e052e4053e09836bfad66218299754d566e86d9 SHA512 994f7a9122a6922ec7e9a26035bcf629c8fbb89bbc399689e6441900201f1b1923cd3bda6ab5ba245c496910af1c7e8a4da02934d1902602136fce08a2388223 WHIRLPOOL 0b15068ccec738b7347194a359b4bea433cef1a4f4f54cb12b65062c1f9889283d3ae6ea59bc603af4e6de73d91473b2a86437434acb1718485c0d2078e687ef -MISC ChangeLog 1667 SHA256 d575b0d40be6c02bfe7bab53fcf4308a8f41ddd6d7b80a0fee7aa4010cbe4b6d SHA512 9a89cd0d6d15bd1a63bfce9887c36fd3cb0bcaffc3d8f0b3f430eaab8a3918ace317edade7d10fb374ee6a4f6fdbe37bafe4c9a552a89c2cd195163a7506c1cc WHIRLPOOL 063d304f324fcca5eae214d0cde685efe3f9397065f93c5b0fbb5a6e371f5c7548c9b1a203d250a8ecb5bc42a5df668731556f9f6980907a5d898dde84d9b9d0 +EBUILD bioperl-db-1.6.0.ebuild 935 SHA256 67841aed2cdc99f42d9596dbdafbac980594d71a455ddbd370167095704ac657 SHA512 7ec3027c834c1a0704ba8e101da080ef1416da68ae0eabe089231889806eb15fc7a0b6f4f533a120b9b88ea5a3b47c24b4f21d7abe00d0ed8c4d21af087e47c3 WHIRLPOOL 4934f5410d82387bdb115a2ecc018f08b3eaf9f26c094ee78d909fc20484bdaa915f71e9dcc6f624688476e7ed3c0f460c62a91fda01b56c5c26decde2e15765 +EBUILD bioperl-db-1.6.9.ebuild 762 SHA256 beba5a93c3a144b7ea36cc0fa552a3887550f761e2dd35c7a919c1b1352edc60 SHA512 296a85d250ab59fa8f53b6f595560de56076accf394e64a77faea6d1cf5d8af793df11a16ae011522207deaacbc6a3a320a03326bc2caefd813bd25789500b1d WHIRLPOOL d4f03a77947b16210193ff36db7604f1c6ff5ab83218ba5622540c1974dbc2da529e3626ea951827842553f695a072e4036aea271521fc256895bfca80588023 +EBUILD bioperl-db-9999-r1.ebuild 975 SHA256 b6e138022894860c8b40bb8c1341dd8d031c41b43305f8bab9f3261c72b8bebb SHA512 582954d290ee5b6eb8decad3d2f18f95e2ee9280f909be1ca4222f12fe016d03e47841b5ce66bd1c12c85a64b46e9cf19836b8501d23e6157a909daabcbc9945 WHIRLPOOL 2500389084e7ae3937de7d2676f823f61793cc86849acb91c678e2623723bde36d6cb84c42dccde2a95352291515dcc499b37311e0b47fd67eeb34be824bf94b +MISC ChangeLog 1830 SHA256 7e95e35ba2ce0923679a851683c0508d48940a23bc24218a387cdf37e1ecec4b SHA512 416bcf915e04cc6da9e4088f8f9a4502895d0cdcfc55353b0bd27cefe05724150732631d5e3c7d95b3176a35170c79de7e5febc6703a086a513333a80f8278dc WHIRLPOOL 27ca29e315c3e4a430d25c7ca6a143e0399751ae11ffabb41414894d24aa58f0678019c5505c73639d97d092f22477bb4dc78a755619e295943582d2d1d6becc MISC metadata.xml 243 SHA256 caaade52752dd9332b4b9a7d233b1ea13357b98591091b09297f57407d9bf55d SHA512 43432ecd4c8101878bf4f42adf279128df74e0d0129c0f178658104d5c60e9938f270cbdd8760d0e000b95a11fcf7d1cba8a58ac0af7a1e595bdfd4761e84dac WHIRLPOOL 7de11b5857df86f15986efd61327090d4112ee9b975680dde9db7c716e760623e2ca114d781205f978aa175657ad4e54ad26a1e15d820c43b479b4957d9030c9 -----BEGIN PGP SIGNATURE----- -Version: GnuPG v2.0.19 (GNU/Linux) +Version: GnuPG v2 -iEYEAREIAAYFAlE97WsACgkQgAnW8HDreRagzgCfXd5zkAIu8A7/eR6bJyMX92tJ -W9IAnAtFD/6Bnla/1xWsTZC/IGwtTtkK -=GwUZ +iJwEAQEIAAYFAlPmpigACgkQG9wOWsQutdZ6NQQAlKaIyhnbhlho5njlerjvnBSQ +rlbz81tMxLJf+QWHANRyUYsctDz7H9SI2tPHCATf53fMNb7Eq1rsMj6BU139g/hF +XRFC5bw+CPQTezNlU1a9xGe8lqzIjSI8NHw3zVgMeZ6sR2A+ZD4ijvGlzRUgx5T2 +uKv9vhGuuXCuPOAF4mg= +=QAwf -----END PGP SIGNATURE----- diff --git a/sci-biology/bioperl-db/bioperl-db-1.6.0.ebuild b/sci-biology/bioperl-db/bioperl-db-1.6.0.ebuild index 4de96ba507f5..9a3a22f0470b 100644 --- a/sci-biology/bioperl-db/bioperl-db-1.6.0.ebuild +++ b/sci-biology/bioperl-db/bioperl-db-1.6.0.ebuild @@ -1,8 +1,8 @@ -# Copyright 1999-2009 Gentoo Foundation +# Copyright 1999-2014 Gentoo Foundation # Distributed under the terms of the GNU General Public License v2 -# $Header: /var/cvsroot/gentoo-x86/sci-biology/bioperl-db/bioperl-db-1.6.0.ebuild,v 1.4 2009/06/11 19:32:42 maekke Exp $ +# $Header: /var/cvsroot/gentoo-x86/sci-biology/bioperl-db/bioperl-db-1.6.0.ebuild,v 1.5 2014/08/09 22:47:12 zlogene Exp $ -EAPI="2" +EAPI="5" inherit perl-module diff --git a/sci-biology/bioperl-db/bioperl-db-1.6.9.ebuild b/sci-biology/bioperl-db/bioperl-db-1.6.9.ebuild index 51a213661f4a..b84040b01c4e 100644 --- a/sci-biology/bioperl-db/bioperl-db-1.6.9.ebuild +++ b/sci-biology/bioperl-db/bioperl-db-1.6.9.ebuild @@ -1,8 +1,8 @@ -# Copyright 1999-2012 Gentoo Foundation +# Copyright 1999-2014 Gentoo Foundation # Distributed under the terms of the GNU General Public License v2 -# $Header: /var/cvsroot/gentoo-x86/sci-biology/bioperl-db/bioperl-db-1.6.9.ebuild,v 1.2 2012/06/23 10:22:57 jlec Exp $ +# $Header: /var/cvsroot/gentoo-x86/sci-biology/bioperl-db/bioperl-db-1.6.9.ebuild,v 1.3 2014/08/09 22:47:12 zlogene Exp $ -EAPI="2" +EAPI="5" BIOPERL_RELEASE=1.6.9 diff --git a/sci-biology/bioperl-db/bioperl-db-9999-r1.ebuild b/sci-biology/bioperl-db/bioperl-db-9999-r1.ebuild index 7da851565225..f2ae78d9e422 100644 --- a/sci-biology/bioperl-db/bioperl-db-9999-r1.ebuild +++ b/sci-biology/bioperl-db/bioperl-db-9999-r1.ebuild @@ -1,8 +1,8 @@ -# Copyright 1999-2011 Gentoo Foundation +# Copyright 1999-2014 Gentoo Foundation # Distributed under the terms of the GNU General Public License v2 -# $Header: /var/cvsroot/gentoo-x86/sci-biology/bioperl-db/bioperl-db-9999-r1.ebuild,v 1.2 2011/09/20 22:17:36 mgorny Exp $ +# $Header: /var/cvsroot/gentoo-x86/sci-biology/bioperl-db/bioperl-db-9999-r1.ebuild,v 1.3 2014/08/09 22:47:12 zlogene Exp $ -EAPI="2" +EAPI="5" inherit perl-module git-2 diff --git a/sci-biology/bioperl-network/ChangeLog b/sci-biology/bioperl-network/ChangeLog index fabea81a9ec7..63946669a138 100644 --- a/sci-biology/bioperl-network/ChangeLog +++ b/sci-biology/bioperl-network/ChangeLog @@ -1,6 +1,10 @@ # ChangeLog for sci-biology/bioperl-network -# Copyright 1999-2013 Gentoo Foundation; Distributed under the GPL v2 -# $Header: /var/cvsroot/gentoo-x86/sci-biology/bioperl-network/ChangeLog,v 1.9 2013/03/11 14:44:57 jlec Exp $ +# Copyright 1999-2014 Gentoo Foundation; Distributed under the GPL v2 +# $Header: /var/cvsroot/gentoo-x86/sci-biology/bioperl-network/ChangeLog,v 1.10 2014/08/09 22:48:22 zlogene Exp $ + + 09 Aug 2014; Mikle Kolyada <zlogene@gentoo.org> bioperl-network-1.6.0.ebuild, + bioperl-network-1.6.9.ebuild, bioperl-network-9999-r1.ebuild: + Bump to EAPI=5 (bug #478714) 11 Mar 2013; Justin Lecher <jlec@gentoo.org> metadata.xml: Drop Andrey as maintainer so that bugs get assigned to sci-biology directly @@ -43,4 +47,3 @@ 16 Mar 2009; Andrey Kislyuk <weaver@gentoo.org> +metadata.xml, +bioperl-network-1.6.0.ebuild, +bioperl-network-9999.ebuild: New package, dependency for sci-biology/bioperl. Ebuild written by me. - diff --git a/sci-biology/bioperl-network/Manifest b/sci-biology/bioperl-network/Manifest index d15d0fed7d36..b06969dae1b5 100644 --- a/sci-biology/bioperl-network/Manifest +++ b/sci-biology/bioperl-network/Manifest @@ -3,15 +3,17 @@ Hash: SHA256 DIST BioPerl-Network-1.006900.tar.gz 2198089 SHA256 5b31ab7d048ee8e7bd6ba933f96b904d7ee06b46ab29c00276eca3513a77c32a SHA512 d0a95af17cb024cbc615c784f1dbcddd7bfc5b54524163ab127f1077ded18df222fe067c085f3dd17dd416d6417b8f726526be164e1e33144991393f6b6d5842 WHIRLPOOL 65ff9e2509c0136232b7cff1aa5e8ad55f26241f51e70e6d34f9383c0af4bfdb0c5358b1a69075d480e9e1fdfa19342058fbe33ea4d4a633220ef3a80d6ed984 DIST BioPerl-network-1.6.0.tar.bz2 902029 SHA256 1f9e48d7bf1b563fef235eede9524f8446a0374b65c6bf522f3203ed61164cb3 -EBUILD bioperl-network-1.6.0.ebuild 780 SHA256 86b66bb3c29afa80280903fd09bac7220494b896ae1e53b8dddf1132f7e49ec1 SHA512 23b972bbbf1197af42754170b5911d55fa78840a0e16a06590fa30285b0548ba6d0c80373774241bd1092612078012240477cab31b61e90ed5f537e117ac4e96 WHIRLPOOL 64cf55a231e47a3fc91cefcaf6f48866a4b825ffd521dd10b96594fac34f12139e11f36303cd67ce63bd0c4cb72cb57e376785406befebe27486c7004ea117ab -EBUILD bioperl-network-1.6.9.ebuild 747 SHA256 426936b83a5228a5f5dc6097ac21b7e8b93c568afc67b87102a8841ee86514ed SHA512 6166907d0a9e12506ef6494dae1c36c00c99a55e3f1f13b6210cd842ce7573d407d6323cf42733647dbe6c8764eb4d82da3d97808447f11e3a7de74dfae2046c WHIRLPOOL 995cbbfe4c25f07fbfcb61716345233f7f66f854a53e37bfbf6929696cf0a1578a120c2b58acf5dc8d07689714ef9f1a43b0060670932b35a6415ea68a541313 -EBUILD bioperl-network-9999-r1.ebuild 815 SHA256 98e5c61ae1b5c7d10d628c02f6b4ff5225dfbcc0bac3fec0c3e727686c282959 SHA512 150db78b95b28ee6860e242b9656a7b379f7b983ba5e4344493305cd640587f53b5cd141291dc5acf25c5ca3607e32558120cd482b97cacc8eee8115b81c7cf5 WHIRLPOOL be90359baec13cb922df6e8f8f38cc2a12b0bc242a8ac542982a3a96a87a8f815543bdd9167afb19c0c3b7ab7502b7d274345bce825c989ae36c380344f3e431 -MISC ChangeLog 1630 SHA256 7d4d0da4a4462f5b55e964928c315eb4e56c940bf54a74df413e14b421d73e70 SHA512 1af393fc8085b8ed98c753e4a862ad7dd8769278439b681fb9e0bcb473757d23c70ba3ada864732388b067c1123e247b967a1f4d0791aa3982ab751b7936a108 WHIRLPOOL ec729e5a61fd7517c6c8ac924bf2eb92db8f1b31cc4e7e0be0bb266230828152b674df77d0de76181f188810ba9dad8fcaf1eb9bd065ce644b244505f9ac74a8 +EBUILD bioperl-network-1.6.0.ebuild 781 SHA256 bf65f52817faa3460e1ce45574f5ec9c7b5407ae38ec60953f895bc5cad75282 SHA512 f7f34ddea8ae1ddcff267082bfb0b358184d03dc1c719d4d817b715236389a4f02a5f08286518a3dadf499f0e4be40ef4221216e7d7f022f61d1b0b93cafb515 WHIRLPOOL ea2068203160bc4c3631490edf824d08b313ab3dd4433b1c7196249b1cb644858c0652b7db44fce114d8e8cb9933194ab5f7a298ceb8454f0257cef315c86bca +EBUILD bioperl-network-1.6.9.ebuild 748 SHA256 fe66b75ca3943e518b73acabce5f231b8de2f9bac07a63dad8efb60832a7bf02 SHA512 f24d0b55cef953476f35582556d22020979df35be459f2c13481f709901904492f7a31edd929bab7a681173afb9c05536ee59957d41120d8448bff668180c26d WHIRLPOOL 900dd0d8d045f449db7e623eca145f8a323e44b02f84e30e99f7f240a979c6861248e9e42a7c19f7038954d981760edcfe75e36264d2299dd85e71fff271ec34 +EBUILD bioperl-network-9999-r1.ebuild 816 SHA256 eb951e17bcd4981414298a748f987260565ce555e691b4b84659811eac15c325 SHA512 2bbab52c65518b555fd50c0a0d0d7e4881559813c2c46e3f361d38ceda9c507d124c448e1aaf139941cb5e2a24e6c97bd103df3880c248c621161b4656b398ba WHIRLPOOL 1772b353b306f21fb7184affe99dbf8afc54c456fb36be05b19c12ad57387bb8d8ade6e794a45c9f56af83ccd7c25cfdcba8d03e61122d6a7a0d28013ff95904 +MISC ChangeLog 1809 SHA256 4a0c59ce68815692feb61e3ac35188c7b7f6693bc0b9196a09224ef77da1cbf2 SHA512 29af5b0010762457503ca2dfd8aad3ec21ed14ff978e0b507b3a7b77e391b11a2cbbeab40737d89e46538e0a48d63ca943d0ca5f6b7b7b7ca46850582d6c08df WHIRLPOOL 46d3730ce8dcc9f8ca4c49540f73c65a28d80c3bebc145e2c0ce1a5f79bcf9738b46dc647f7ce9d4bf6290f9306fe1f72fe1d9e6d5b0ed3fa3222869851d0e79 MISC metadata.xml 248 SHA256 dbfd5f643fae0df4baa7271ae0029203db6b1c3a3ab9774ec1b9cba26ab3c2cd SHA512 13b45d68789a04b4253bcbd9d10883c1eb3256657a67df00827c7c6e9e4853dbf8a670eb88e674d84a2790bc8c9aa4f5ce55ff7478eb7d261011bf6f573719b9 WHIRLPOOL 684409333d8a43c27c5c86816e1def48384ecd85353f381cc98122477a4e91bfae7e071cf3754727651b70adc6a5f9258e2d78f3689bdf6e2db2db8e72c30859 -----BEGIN PGP SIGNATURE----- -Version: GnuPG v2.0.19 (GNU/Linux) +Version: GnuPG v2 -iEYEAREIAAYFAlE97eoACgkQgAnW8HDreRbX0wCeMvwrBhX2ExN/CzO+vtKRqbH0 -KKQAoLH0ag1AQyXQR8U4vP7ScHbvVNBw -=pLQs +iJwEAQEIAAYFAlPmpmwACgkQG9wOWsQutdYJ1QQAlr0nArAyZtuOvT9MK+AsIaZF +pansiDLtK1Dg/DcnH5pAvHaggj9T/Nq6LNYaoB99Pkgcdidut/xZxPETZBCyaxuf +rKhG9PrYeZV1r5gM385khIlDT0x8chNimkUOzopyJ42EimtNhayyhrh0kbJFPfQo +DXOloco8N6cmdI4bRNQ= +=1foo -----END PGP SIGNATURE----- diff --git a/sci-biology/bioperl-network/bioperl-network-1.6.0.ebuild b/sci-biology/bioperl-network/bioperl-network-1.6.0.ebuild index 22d3db767a0b..20f9c5ac0a90 100644 --- a/sci-biology/bioperl-network/bioperl-network-1.6.0.ebuild +++ b/sci-biology/bioperl-network/bioperl-network-1.6.0.ebuild @@ -1,8 +1,8 @@ -# Copyright 1999-2009 Gentoo Foundation +# Copyright 1999-2014 Gentoo Foundation # Distributed under the terms of the GNU General Public License v2 -# $Header: /var/cvsroot/gentoo-x86/sci-biology/bioperl-network/bioperl-network-1.6.0.ebuild,v 1.4 2009/06/11 19:34:12 maekke Exp $ +# $Header: /var/cvsroot/gentoo-x86/sci-biology/bioperl-network/bioperl-network-1.6.0.ebuild,v 1.5 2014/08/09 22:48:22 zlogene Exp $ -EAPI="2" +EAPI="5" inherit perl-module diff --git a/sci-biology/bioperl-network/bioperl-network-1.6.9.ebuild b/sci-biology/bioperl-network/bioperl-network-1.6.9.ebuild index 0789f79852e7..bc5277b61d29 100644 --- a/sci-biology/bioperl-network/bioperl-network-1.6.9.ebuild +++ b/sci-biology/bioperl-network/bioperl-network-1.6.9.ebuild @@ -1,8 +1,8 @@ -# Copyright 1999-2011 Gentoo Foundation +# Copyright 1999-2014 Gentoo Foundation # Distributed under the terms of the GNU General Public License v2 -# $Header: /var/cvsroot/gentoo-x86/sci-biology/bioperl-network/bioperl-network-1.6.9.ebuild,v 1.1 2011/07/18 06:30:02 weaver Exp $ +# $Header: /var/cvsroot/gentoo-x86/sci-biology/bioperl-network/bioperl-network-1.6.9.ebuild,v 1.2 2014/08/09 22:48:22 zlogene Exp $ -EAPI="2" +EAPI="5" BIOPERL_RELEASE=1.6.9 diff --git a/sci-biology/bioperl-network/bioperl-network-9999-r1.ebuild b/sci-biology/bioperl-network/bioperl-network-9999-r1.ebuild index 1285f677a4b3..9b2cfa8bd237 100644 --- a/sci-biology/bioperl-network/bioperl-network-9999-r1.ebuild +++ b/sci-biology/bioperl-network/bioperl-network-9999-r1.ebuild @@ -1,8 +1,8 @@ -# Copyright 1999-2011 Gentoo Foundation +# Copyright 1999-2014 Gentoo Foundation # Distributed under the terms of the GNU General Public License v2 -# $Header: /var/cvsroot/gentoo-x86/sci-biology/bioperl-network/bioperl-network-9999-r1.ebuild,v 1.2 2011/09/20 22:17:50 mgorny Exp $ +# $Header: /var/cvsroot/gentoo-x86/sci-biology/bioperl-network/bioperl-network-9999-r1.ebuild,v 1.3 2014/08/09 22:48:22 zlogene Exp $ -EAPI="2" +EAPI="5" inherit perl-module git-2 diff --git a/sci-biology/bioperl-run/ChangeLog b/sci-biology/bioperl-run/ChangeLog index a790e5ac6452..7b484e3eefc7 100644 --- a/sci-biology/bioperl-run/ChangeLog +++ b/sci-biology/bioperl-run/ChangeLog @@ -1,6 +1,10 @@ # ChangeLog for sci-biology/bioperl-run -# Copyright 1999-2012 Gentoo Foundation; Distributed under the GPL v2 -# $Header: /var/cvsroot/gentoo-x86/sci-biology/bioperl-run/ChangeLog,v 1.24 2012/11/02 20:39:27 jlec Exp $ +# Copyright 1999-2014 Gentoo Foundation; Distributed under the GPL v2 +# $Header: /var/cvsroot/gentoo-x86/sci-biology/bioperl-run/ChangeLog,v 1.25 2014/08/09 22:49:45 zlogene Exp $ + + 09 Aug 2014; Mikle Kolyada <zlogene@gentoo.org> bioperl-run-1.6.1.ebuild, + bioperl-run-1.6.9.ebuild, bioperl-run-9999-r1.ebuild: + Bump to EAPI=5 (bug #478714) 02 Nov 2012; Justin Lecher <jlec@gentoo.org> -bioperl-run-1.5.1.ebuild: Dropped old @@ -122,4 +126,3 @@ 29 Sep 2003; <sediener@gentoo.org> bioperl-run-1.2.2.ebuild, metadata.xml, files/bioperl-run-Pise-test-patch.diff: Initial Import. Built of of the bioperl ebuild from Gontran Zepeda. - diff --git a/sci-biology/bioperl-run/Manifest b/sci-biology/bioperl-run/Manifest index b1c223c73b8f..29143c946890 100644 --- a/sci-biology/bioperl-run/Manifest +++ b/sci-biology/bioperl-run/Manifest @@ -1,18 +1,20 @@ -----BEGIN PGP SIGNED MESSAGE----- -Hash: SHA512 +Hash: SHA256 AUX bioperl-run-Pise-test-patch.diff 722 SHA256 84c8280f8d3af311b53c8b6edd4e6ffa9acc0824528d96d7f1c2537404d3e30f SHA512 75aca2b0faa198e923673f4f0e4c40c04179881dbe33ad4ae7f831ff7eb633d26baa44dd983dcf8e3edef672b4dbd92d3d46983ecc8419cca1beb3acdbdf2111 WHIRLPOOL 54367c5bf97f72adce7ae21dfd554c9ddafdc2b176a2ac1529aa3c8cd7dfda0d961b1249d025c3a810458aebc28e42365434c633cd30ead0348141804de3c5b4 DIST BioPerl-Run-1.006900.tar.gz 14546677 SHA256 6eddca8aae38a139caaa0b28505e2ff3e919e8ed39b7539a662b0145f1f08d96 SHA512 47f2b853885c604291ac0aba3269b897de59cf7da6f7d54a50ff950cca836338091309df550f32695159c620be23391306d0421d2bbc22eebbb61a9e280ad83c WHIRLPOOL a671180b3680d94683e771ba661e0f86430814200efcd8df1552dbc3c30228d90ea8be1b47cc36603cbfc6eadacb276414ae6d79e30ec80495fd836eb1732cca DIST BioPerl-run-1.6.1.tar.bz2 3968370 SHA256 16f406d196b6e6d063f4ef518161571ea27909c5b47184d9eddf1eb9da147f53 -EBUILD bioperl-run-1.6.1.ebuild 1105 SHA256 beb92bf8a0385ae0111496401c599947ae80702eb529cfcbd4adc6cd5d7b3fc5 SHA512 fa5e534eda042af7c6d550b4001b1a1aad5d23bb58d4514554e8d6ead615d55bff1ed78ae17f3353636e302c4a6cd733efc73287f0e6ceea5ee9d6ea975bf323 WHIRLPOOL a4c49094ce2ba9f8cf7bc81fae35d19a7f43707fb837b67e4fdce0b3d4588c06d893717063954c382bf87539b380b52a90bcff984bd823878985f66b20dfbedb -EBUILD bioperl-run-1.6.9.ebuild 1090 SHA256 e0f4fd2b34db3b192b1ae4720c24850b500e8b34234c62fbcddcbd36e405418b SHA512 3de53218ccabcfd33b55e4d528b0364d780d06788de9a09eb35f12017b37c281f21fa0b74f9aad0f81a3f18faff85d54d4cf27aa93ec61eea33684f140759075 WHIRLPOOL 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8060992e922dbc0e689eab2ec36360e956782f4a5677ae3f87a2b39861f01f6c02cbbbbf2e89d895fe0eeade68ddc44cc571d878198ffe3533ab941baabf1467 WHIRLPOOL 89327927791fd8f932f347375b27c3c292ba34d503f6724c362f19a73b2722a8e21437d1187a98bc45a4ab38172165c149255b06847f6c5ed6ab2dae13166831 +EBUILD bioperl-run-1.6.9.ebuild 1091 SHA256 2a584c88e4c3841af2b938488eba10f1ae6615c98753ff9071c218db78f34d2f SHA512 8a9b4f4921215ff90f11236d20af3b43ce8b82851fcea29a8f582ca197642bb57bd375309768bd2a08fb2456b10f0c0fb38878e668bca949f16e5c99a459d44f WHIRLPOOL 401f9153da9af33e541617f2060ba0603dc1936963350b33b236e628679305765cd6e5ecde17f1d6fe3686870df1c25fb7d3247eaf97a9fe97a0184776630300 +EBUILD bioperl-run-9999-r1.ebuild 1124 SHA256 ae3731d4ac16ba293b0a9e04e85e11d8d577f7dbdf395de2058fe61fa8699afb SHA512 9892d3db721583a055e8e684b95bebcdc4bf04bb179d6707b009afb8195a0b5535d02ff1a4ffb5cf506fdbff8706a6f5cb2fccb936254f327350e64a9904eaa2 WHIRLPOOL 2ccdf58b4090114df96d3bb594453e27b5ce56c65166b8a0c3b64692bcfab25f6846af7e144d65b7ffbf3d43c2a5c0ae7c1efb2112048fe1d7e664ebf9ba8d87 +MISC ChangeLog 4412 SHA256 72f1f3059d91c624acae532312d0d0ea65dcc59335e4301c69c9aa62249e4ec6 SHA512 a71521e0f10a14713c511b68ae45bdcd22351409cbad6c3ea2d9315a2e42b552532e45c1025a4f77840036e9aa3a0fd2cfb56391b8cac7ad131a468cb4091570 WHIRLPOOL 68b5bd61ceaf534de27125995e583d2271dcdc6e7ba6be5d0856a3b63fa89f6c5ead1271aa4861eb30a5141a1af6629082330e7c0a4e786b457c8c7fe4ec7408 MISC metadata.xml 239 SHA256 60082888c0555ed9bf001256819cf779438504bbc38afac272bc4bb696eed6a4 SHA512 e25122619624257aa7caf3c4a456c9f404dae487091dc1e250425463a4cf8ad8eabc259f607e49362de3906eabcd0ded1aa5861126d35c08ff8a6cd65b87c3d4 WHIRLPOOL 85438f199a1834d64deebd761b736accedc8ca6788b808affd1d9f8f278ec8e80251c4e1d500aaf69639d4601aa695d4cf733b8b1e59951683c8c86aa2146dc6 -----BEGIN PGP SIGNATURE----- -Version: GnuPG v2.0.19 (GNU/Linux) +Version: GnuPG v2 -iEUEAREKAAYFAlCUL4AACgkQgAnW8HDreRbpFgCXTADxwitDqmmFOgn+ZCpBpgSx -SQCfcusblppeByS3OrIKRvTq0l0+WTI= -=eRJr +iJwEAQEIAAYFAlPmpr0ACgkQG9wOWsQutdZCTQQAxJtmunnW+LheUBHS1ch8Nq9J +YLWeZRhJsDBgMZDgJz4HZZWBkUyFco+Xhdbz88mjnd1kiO1AdP5ODzSZePgohynQ +xIE5L3Uc19vf5hPnXTcoV1L7ie5G15KbvzPknJezFGTu9wpLem2g3lOniiHgissj +zDwCChVSCpDg78TphZQ= +=dEh1 -----END PGP SIGNATURE----- diff --git a/sci-biology/bioperl-run/bioperl-run-1.6.1.ebuild b/sci-biology/bioperl-run/bioperl-run-1.6.1.ebuild index 29baf4e6b915..2cad02c05ca7 100644 --- a/sci-biology/bioperl-run/bioperl-run-1.6.1.ebuild +++ b/sci-biology/bioperl-run/bioperl-run-1.6.1.ebuild @@ -1,8 +1,8 @@ -# Copyright 1999-2009 Gentoo Foundation +# Copyright 1999-2014 Gentoo Foundation # Distributed under the terms of the GNU General Public License v2 -# $Header: /var/cvsroot/gentoo-x86/sci-biology/bioperl-run/bioperl-run-1.6.1.ebuild,v 1.6 2009/06/11 19:33:30 maekke Exp $ +# $Header: /var/cvsroot/gentoo-x86/sci-biology/bioperl-run/bioperl-run-1.6.1.ebuild,v 1.7 2014/08/09 22:49:45 zlogene Exp $ -EAPI="2" +EAPI="5" inherit perl-module diff --git a/sci-biology/bioperl-run/bioperl-run-1.6.9.ebuild b/sci-biology/bioperl-run/bioperl-run-1.6.9.ebuild index 03269a36d870..7c8cd5c20591 100644 --- a/sci-biology/bioperl-run/bioperl-run-1.6.9.ebuild +++ b/sci-biology/bioperl-run/bioperl-run-1.6.9.ebuild @@ -1,8 +1,8 @@ -# Copyright 1999-2011 Gentoo Foundation +# Copyright 1999-2014 Gentoo Foundation # Distributed under the terms of the GNU General Public License v2 -# $Header: /var/cvsroot/gentoo-x86/sci-biology/bioperl-run/bioperl-run-1.6.9.ebuild,v 1.1 2011/07/18 06:30:59 weaver Exp $ +# $Header: /var/cvsroot/gentoo-x86/sci-biology/bioperl-run/bioperl-run-1.6.9.ebuild,v 1.2 2014/08/09 22:49:45 zlogene Exp $ -EAPI="2" +EAPI="5" BIOPERL_RELEASE=1.6.9 diff --git a/sci-biology/bioperl-run/bioperl-run-9999-r1.ebuild b/sci-biology/bioperl-run/bioperl-run-9999-r1.ebuild index 25c5799d2ec3..d6a8ce319ad7 100644 --- a/sci-biology/bioperl-run/bioperl-run-9999-r1.ebuild +++ b/sci-biology/bioperl-run/bioperl-run-9999-r1.ebuild @@ -1,8 +1,8 @@ -# Copyright 1999-2011 Gentoo Foundation +# Copyright 1999-2014 Gentoo Foundation # Distributed under the terms of the GNU General Public License v2 -# $Header: /var/cvsroot/gentoo-x86/sci-biology/bioperl-run/bioperl-run-9999-r1.ebuild,v 1.2 2011/09/20 22:19:00 mgorny Exp $ +# $Header: /var/cvsroot/gentoo-x86/sci-biology/bioperl-run/bioperl-run-9999-r1.ebuild,v 1.3 2014/08/09 22:49:45 zlogene Exp $ -EAPI="2" +EAPI="5" inherit perl-module git-2 diff --git a/sci-biology/bioperl/ChangeLog b/sci-biology/bioperl/ChangeLog index 1c27629a3030..93aa365d3edf 100644 --- a/sci-biology/bioperl/ChangeLog +++ b/sci-biology/bioperl/ChangeLog @@ -1,6 +1,10 @@ # ChangeLog for sci-biology/bioperl # Copyright 1999-2014 Gentoo Foundation; Distributed under the GPL v2 -# $Header: /var/cvsroot/gentoo-x86/sci-biology/bioperl/ChangeLog,v 1.53 2014/07/10 22:15:26 dilfridge Exp $ +# $Header: /var/cvsroot/gentoo-x86/sci-biology/bioperl/ChangeLog,v 1.54 2014/08/09 22:46:03 zlogene Exp $ + + 09 Aug 2014; Mikle Kolyada <zlogene@gentoo.org> bioperl-1.6.0-r2.ebuild, + bioperl-1.6.9.ebuild, bioperl-9999-r1.ebuild: + Bump to EAPI=5 (bug #478714) 10 Jul 2014; Andreas K. Huettel <dilfridge@gentoo.org> bioperl-1.6.9.ebuild: Depend on virtual/perl-x instead of perl-core/x diff --git a/sci-biology/bioperl/Manifest b/sci-biology/bioperl/Manifest index f9d01ef8fd1f..94dff6b872b4 100644 --- a/sci-biology/bioperl/Manifest +++ b/sci-biology/bioperl/Manifest @@ -3,27 +3,17 @@ Hash: SHA256 DIST BioPerl-1.6.0.tar.bz2 5640786 SHA256 50a35b1b2552c8f54c83f2bbba7b36264e94443374b86b389208437c8cae3bf6 DIST BioPerl-1.6.901.tar.gz 12284856 SHA256 8c74bde900222ce3926491ee103997c841c8755148c8dcaf0be1abfd61c5ac01 SHA512 227387437c940da1435ed83fad6ec2168ca12a729c90dc557e84750c6474213874c23a8f23e50db4027909469627baee581faa11be6208c8e0a5453a01c7eca4 WHIRLPOOL feb1f93a617e0135ab84b0eeb36ac986e817ce76ada0f40518090f6a480fbb1047339b33fcd11ccff444f89c4a06c41b5abaab66b662a50f17ae34f9b22d66fd -EBUILD bioperl-1.6.0-r2.ebuild 1813 SHA256 a126ac668e16c021ec4e2bc8722da8d4b536f49c10075f829bf44fd41e7b7349 SHA512 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+1,8 @@ -# Copyright 1999-2009 Gentoo Foundation +# Copyright 1999-2014 Gentoo Foundation # Distributed under the terms of the GNU General Public License v2 -# $Header: /var/cvsroot/gentoo-x86/sci-biology/bioperl/bioperl-1.6.0-r2.ebuild,v 1.5 2009/06/11 19:35:12 maekke Exp $ +# $Header: /var/cvsroot/gentoo-x86/sci-biology/bioperl/bioperl-1.6.0-r2.ebuild,v 1.6 2014/08/09 22:46:03 zlogene Exp $ -EAPI="2" +EAPI="5" inherit perl-module diff --git a/sci-biology/bioperl/bioperl-1.6.9.ebuild b/sci-biology/bioperl/bioperl-1.6.9.ebuild index 3bef30d6403e..79bc667d4170 100644 --- a/sci-biology/bioperl/bioperl-1.6.9.ebuild +++ b/sci-biology/bioperl/bioperl-1.6.9.ebuild @@ -1,8 +1,8 @@ # Copyright 1999-2014 Gentoo Foundation # Distributed under the terms of the GNU General Public License v2 -# $Header: /var/cvsroot/gentoo-x86/sci-biology/bioperl/bioperl-1.6.9.ebuild,v 1.2 2014/07/10 22:15:25 dilfridge Exp $ +# $Header: /var/cvsroot/gentoo-x86/sci-biology/bioperl/bioperl-1.6.9.ebuild,v 1.3 2014/08/09 22:46:03 zlogene Exp $ -EAPI="2" +EAPI="5" MY_PN=BioPerl MODULE_AUTHOR=CJFIELDS diff --git a/sci-biology/bioperl/bioperl-9999-r1.ebuild b/sci-biology/bioperl/bioperl-9999-r1.ebuild index 9145d5d6a83b..5c32f1bef1e9 100644 --- a/sci-biology/bioperl/bioperl-9999-r1.ebuild +++ b/sci-biology/bioperl/bioperl-9999-r1.ebuild @@ -1,8 +1,8 @@ -# Copyright 1999-2011 Gentoo Foundation +# Copyright 1999-2014 Gentoo Foundation # Distributed under the terms of the GNU General Public License v2 -# $Header: /var/cvsroot/gentoo-x86/sci-biology/bioperl/bioperl-9999-r1.ebuild,v 1.2 2011/09/20 22:15:18 mgorny Exp $ +# $Header: /var/cvsroot/gentoo-x86/sci-biology/bioperl/bioperl-9999-r1.ebuild,v 1.3 2014/08/09 22:46:03 zlogene Exp $ -EAPI="2" +EAPI="5" inherit perl-module git-2 |