Dropped old

Package-Manager: portage-2.2.0_alpha90/cvs/Linux x86_64

4 files changed, 16 insertions, 110 deletions

diff --git a/sci-biology/rebase/ChangeLog b/sci-biology/rebase/ChangeLog
index de25b064d3f6..32f2200f4bf2 100644
--- a/sci-biology/rebase/ChangeLog
+++ b/sci-biology/rebase/ChangeLog
@@ -1,6 +1,10 @@
 # ChangeLog for sci-biology/rebase
 # Copyright 1999-2012 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/rebase/ChangeLog,v 1.113 2012/03/07 20:49:46 ranger Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/rebase/ChangeLog,v 1.114 2012/03/08 07:15:15 jlec Exp $
+
+  08 Mar 2012; Justin Lecher <jlec@gentoo.org> -rebase-1006.ebuild,
+  -rebase-1105.ebuild:
+  Dropped old
 
   07 Mar 2012; Brent Baude <ranger@gentoo.org> rebase-1111.ebuild:
   Marking rebase-1111 ppc for bug 402053
diff --git a/sci-biology/rebase/Manifest b/sci-biology/rebase/Manifest
index 5cbfb87e8c54..bc8fabedb6ce 100644
--- a/sci-biology/rebase/Manifest
+++ b/sci-biology/rebase/Manifest
@@ -1,10 +1,16 @@
-DIST rebase-1006.tar.xz 21163928 RMD160 98fd3a9d8a82a663e420fc2948de0280b44d0f1c SHA1 095b8030cb5ab47d2e519ce5f7046eeef0522e3d SHA256 9d5dd0429f4000cd0a4a96a9631d48eeea8fd4e6868b344a4e636cc43e1c7fdd
-DIST rebase-1105.tar.xz 18584656 RMD160 86811fb9135452475cc5e275fd5df2025a41ce23 SHA1 d513a2210963de0a98569d79c4c8a2a2fbe2bc3f SHA256 e10365a15e280f5166104149df437683904bf0e2eef613823f3768b4da8ff17d
+-----BEGIN PGP SIGNED MESSAGE-----
+Hash: SHA512
+
 DIST rebase-1111.tar.xz 27905208 RMD160 cf5af90f97b9a19f4a74673352dc154ac8c2087b SHA1 ba3f4aa2bab6a25c1865561d0b5584cace614a18 SHA256 a4071740cf41afdbae0ecb91648bae954b8b708b00d4b0d6bb21a746f6a9201c
 DIST rebase-1202.tar.xz 25806116 RMD160 ff5050d545712f0b0d64b07fec6b66c529b23836 SHA1 bb4ea5a15cc914e891649f746d890f1a855bd775 SHA256 ac3dae93c43d44721a35cb97b1360500782367190750e47cd7dc9d71c2a6d851
-EBUILD rebase-1006.ebuild 1509 RMD160 be91cb8ef42d840dc65503fa1fb190f1656d5a79 SHA1 7716fb2c43eeaf2364ac5990d05f795434e70f85 SHA256 0a195f60280d922265e7ad9754cc326b4160f73e501d8af9d23c35746e03c446
-EBUILD rebase-1105.ebuild 1562 RMD160 f2e73034259931023ea550b767a641779549228e SHA1 9aa47081b0bdde8474ea9a0eb6319e1d85945e2a SHA256 371139a012fddeb57042917425a61681a92510731dd4e18abd9da1038312b739
 EBUILD rebase-1111.ebuild 1557 RMD160 c52ba140206eff4fb705c4f1ed957e183c96c6d7 SHA1 8d245706f1f162b2eb07a2b079127162cd4d2e21 SHA256 ef443cc60e50737442380b9444cd2d52273b6bbdeeb753039307114ff9ab8c2b
 EBUILD rebase-1202.ebuild 1558 RMD160 fb75b42c28d71091a9aa1ccf87d2b531055c1989 SHA1 fcfd87b525d1df2810bb88e865c6441e8734d797 SHA256 27543b7a349980366c7e505e98d23f06bc6bd8ceea346323267fd39d2b1a9ab7
-MISC ChangeLog 14862 RMD160 71c6755b622cfe966b69c70eb8a3fa36b856b75b SHA1 ad421f5bacb385d4dbdd770827c3963d4fab2ade SHA256 475ea354d381d65f5979abd13a98482d2abd1012f952fb747a4640beb70bee84
+MISC ChangeLog 14966 RMD160 c979ffd62e60da7680c557a282883dd40d2142e7 SHA1 a95670f46663d19395dd732c825606b40f678fba SHA256 07d402c62fb809371997d23ff0d2ec1b21144f74b320ee706d0fc4fdbc84a6c1
 MISC metadata.xml 811 RMD160 f1dd0a77488312defebf403ac55aa57e4d15bcdc SHA1 6fefbf2aa855c5aba0ff15dfb9c3ea90bd104482 SHA256 65603e5b252a8afc1f9e2a5db69d8dcac525f6dc669cbe1eb23bc47624c8bde2
+-----BEGIN PGP SIGNATURE-----
+Version: GnuPG v2.0.18 (GNU/Linux)
+
+iEYEAREKAAYFAk9YXIcACgkQgAnW8HDreRZlYgCeJtoWt6A6tZTA/vVQQfPaPs1R
+Qf8An3hNsjo+Uf1cnjik6sVyy5r+5BJq
+=rWL4
+-----END PGP SIGNATURE-----
diff --git a/sci-biology/rebase/rebase-1006.ebuild b/sci-biology/rebase/rebase-1006.ebuild
deleted file mode 100644
index 39afb1341aac..000000000000
--- a/sci-biology/rebase/rebase-1006.ebuild
+++ /dev/null
@@ -1,51 +0,0 @@
-# Copyright 1999-2011 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/rebase/rebase-1006.ebuild,v 1.10 2011/08/09 15:36:16 xarthisius Exp $
-
-EAPI="3"
-
-MY_PV=${PV#1}
-
-DESCRIPTION="A restriction enzyme database"
-HOMEPAGE="http://rebase.neb.com"
-SRC_URI="mirror://gentoo/${P}.tar.xz"
-
-SLOT="0"
-# Minimal build keeps only the indexed files (if applicable) and the
-# documentation. The non-indexed database is not installed.
-IUSE="emboss minimal"
-KEYWORDS="amd64 ppc x86 ~amd64-linux ~x86-linux ~ppc-macos ~sparc-solaris ~x86-solaris"
-LICENSE="public-domain"
-
-RDEPEND="emboss? ( >=sci-biology/emboss-5.0.0 )"
-DEPEND="${RDEPEND}"
-
-RESTRICT="binchecks strip"
-
-src_compile() {
-	if use emboss; then
-		echo; einfo "Indexing Rebase for usage with EMBOSS."
-		mkdir REBASE
-		EMBOSS_DATA="." rebaseextract -auto -infile withrefm.${MY_PV} \
-				-protofile proto.${MY_PV} -equivalences \
-				|| die "Indexing Rebase failed."
-		echo
-	fi
-}
-
-src_install() {
-	if ! use minimal; then
-		insinto /usr/share/${PN}
-		doins withrefm.${MY_PV} proto.${MY_PV} || die \
-				"Failed to install raw database."
-	fi
-	newdoc REBASE.DOC README || die "Failed to install documentation."
-	if use emboss; then
-		insinto /usr/share/EMBOSS/data/REBASE
-		doins REBASE/embossre.{enz,ref,sup} || die \
-				"Failed to install EMBOSS data files."
-		insinto /usr/share/EMBOSS/data
-		doins REBASE/embossre.equ \
-				|| die "Failed to install enzyme prototypes file."
-	fi
-}
diff --git a/sci-biology/rebase/rebase-1105.ebuild b/sci-biology/rebase/rebase-1105.ebuild
deleted file mode 100644
index 3da08e665bed..000000000000
--- a/sci-biology/rebase/rebase-1105.ebuild
+++ /dev/null
@@ -1,53 +0,0 @@
-# Copyright 1999-2011 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/rebase/rebase-1105.ebuild,v 1.4 2011/11/28 11:43:41 phajdan.jr Exp $
-
-EAPI="3"
-
-MY_PV=${PV#1}
-
-DESCRIPTION="A restriction enzyme database"
-HOMEPAGE="http://rebase.neb.com"
-SRC_URI="
-	mirror://gentoo/${P}.tar.xz
-	http://dev.gentoo.org/~jlec/distfiles/${P}.tar.xz"
-
-SLOT="0"
-# Minimal build keeps only the indexed files (if applicable) and the
-# documentation. The non-indexed database is not installed.
-IUSE="emboss minimal"
-LICENSE="public-domain"
-KEYWORDS="amd64 ~ppc x86 ~amd64-linux ~x86-linux ~ppc-macos ~sparc-solaris ~x86-solaris"
-
-RDEPEND="emboss? ( >=sci-biology/emboss-5.0.0 )"
-DEPEND="${RDEPEND}"
-
-RESTRICT="binchecks strip"
-
-src_compile() {
-	if use emboss; then
-		echo; einfo "Indexing Rebase for usage with EMBOSS."
-		mkdir REBASE
-		EMBOSS_DATA="." rebaseextract -auto -infile withrefm.${MY_PV} \
-				-protofile proto.${MY_PV} -equivalences \
-				|| die "Indexing Rebase failed."
-		echo
-	fi
-}
-
-src_install() {
-	if ! use minimal; then
-		insinto /usr/share/${PN}
-		doins withrefm.${MY_PV} proto.${MY_PV} || die \
-				"Failed to install raw database."
-	fi
-	newdoc REBASE.DOC README || die "Failed to install documentation."
-	if use emboss; then
-		insinto /usr/share/EMBOSS/data/REBASE
-		doins REBASE/embossre.{enz,ref,sup} || die \
-				"Failed to install EMBOSS data files."
-		insinto /usr/share/EMBOSS/data
-		doins REBASE/embossre.equ \
-				|| die "Failed to install enzyme prototypes file."
-	fi
-}