summaryrefslogtreecommitdiff
diff options
context:
space:
mode:
authorSergey Popov <pinkbyte@gentoo.org>2014-08-29 15:04:20 +0000
committerSergey Popov <pinkbyte@gentoo.org>2014-08-29 15:04:20 +0000
commit590a36efd57dd096bf992d02077246c57eacc51a (patch)
treef9e6649c6413e57d426622abb6602a046cebf56d /sci-biology
parentAdd slotting to rust ebuilds (diff)
downloadhistorical-590a36efd57dd096bf992d02077246c57eacc51a.tar.gz
historical-590a36efd57dd096bf992d02077246c57eacc51a.tar.bz2
historical-590a36efd57dd096bf992d02077246c57eacc51a.zip
QA: move AUTOTOOLS_IN_SOURCE_BUILD definition beforce inheriting autotools eclass, drop obsolete python 2.6 support
Package-Manager: portage-2.2.12/cvs/Linux x86_64 Manifest-Sign-Key: 0x1F357D42
Diffstat (limited to 'sci-biology')
-rw-r--r--sci-biology/vienna-rna/ChangeLog6
-rw-r--r--sci-biology/vienna-rna/Manifest28
-rw-r--r--sci-biology/vienna-rna/vienna-rna-2.1.1.ebuild9
3 files changed, 20 insertions, 23 deletions
diff --git a/sci-biology/vienna-rna/ChangeLog b/sci-biology/vienna-rna/ChangeLog
index aa3ad8311b9c..2b4d9f59a48f 100644
--- a/sci-biology/vienna-rna/ChangeLog
+++ b/sci-biology/vienna-rna/ChangeLog
@@ -1,6 +1,10 @@
# ChangeLog for sci-biology/vienna-rna
# Copyright 1999-2014 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/vienna-rna/ChangeLog,v 1.50 2014/01/06 15:32:47 jlec Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/vienna-rna/ChangeLog,v 1.51 2014/08/29 15:04:18 pinkbyte Exp $
+
+ 29 Aug 2014; Sergey Popov <pinkbyte@gentoo.org> vienna-rna-2.1.1.ebuild:
+ QA: move AUTOTOOLS_IN_SOURCE_BUILD definition beforce inheriting autotools
+ eclass, drop obsolete python 2.6 support
06 Jan 2014; Justin Lecher <jlec@gentoo.org> vienna-rna-1.8.5.ebuild:
Punt base.eclass
diff --git a/sci-biology/vienna-rna/Manifest b/sci-biology/vienna-rna/Manifest
index d01cd9cbae83..6ba981fd64b4 100644
--- a/sci-biology/vienna-rna/Manifest
+++ b/sci-biology/vienna-rna/Manifest
@@ -1,5 +1,5 @@
-----BEGIN PGP SIGNED MESSAGE-----
-Hash: SHA512
+Hash: SHA256
AUX vienna-rna-1.6.5-c-fixes.patch 728 SHA256 49955a6244eb3be73f8d2472f3a4f9b8d1f8f92ba11327961b901a2c1f1e24d8 SHA512 5c3694d595e8382a3946366ddae9be2556d4b772fbf20fc2c8612b707b3b8d5f797d5b04d1ed48966f8ec6eb9a846830c12d574293b05e016ad4eacf8196c122 WHIRLPOOL a73d73eed88a62257db1e3033382c0e1acaf110a634034b13c58e78818ffd22e18c96ea049af824037ebc77184ecc431d4a965f0cc03f3e6f6ff949e5bce6269
AUX vienna-rna-1.7.2-LDFLAGS.patch 978 SHA256 0c7db17c7a1a8a075e26f6b98b19c84a3f98f9ecdaa06755e4e426fcb1b8ce8c SHA512 a5fea1fc9c969d2bde9094b8303ee5d0b77f0570107d403279bcc3884d2925f81789d3d08627caadf92f435bbf369721dbc95e1122bde5741340104526a532b2 WHIRLPOOL 82d3e59c9a399cd352f72477fc9803012ef288e3198b0c69e86ce184cfe75c1c824b149b6ea55771da88180d9d402e1d8ed8444aac1f1bcd9211ded54f15d917
@@ -17,23 +17,17 @@ AUX vienna-rna-2.1.1-setup.py 810 SHA256 035f9c8aff6b6bc575b089e48e79bffe7da093d
DIST ViennaRNA-1.8.5.tar.gz 1306792 SHA256 f4e2d94beaf77165e8321758e4ab0ad1c5d49879cefa12e48b07d09ed2d0ecf9 SHA512 3121bbeb476c1828f2238d32ab4fea724fd17d9108cb38ea76a73b64eda97a36689080faa6745a4cd369178239443eeb68621da0cd96beb55d2bd0b6cb0891de WHIRLPOOL e561f6e3506e85f54974d3bf9def910d404cdc94bb8e184933b90698a083c5c5e40510deec6486737081ca602b560b5409c79a21a517daa2b859c7430abc0fb6
DIST ViennaRNA-2.1.1.tar.gz 5327215 SHA256 bfea440dface4562d5dfb0a1c83bf226c0697bb18aacae0dc84c555282cedebe SHA512 b272afa1146543b290db605debab2badbdbf04fcdfd6130ed3b10604255476b3472b184e9af8a0bbeaa0def266f1a167c125d6cfd02aa3f7ae463697dc5226d5 WHIRLPOOL 48b6bcd96b2ff2523ba00335cac7fe141b6ed7f037a3192e6c174297266d0f967492a67afaaa6c05f8b28fdc0eb7c9b72d0d9daba286b5dd3dca4456cc058b1f
EBUILD vienna-rna-1.8.5.ebuild 2894 SHA256 2fa8a73b0119ae259a50a467e7ad219e5b43940a241fedbc2d1b60f679cce4ef SHA512 7240d39a6aca463c381c8ffbf50273cc01822d2bb8d8654a044b462d4f14efba175b29bbf7bafc1d0fd7a2dcf4bac5ac8d6e89b71f80586cb837186f6025e97c WHIRLPOOL 363bb606d1f3f436a77deaf7a42fb6797b67937770f7f58d744450216fdcf63ce6aa12ff748a30d7ace3ce499c8fbf3ac15f8fc1f721568396f2034014588043
-EBUILD vienna-rna-2.1.1.ebuild 2777 SHA256 22450a8453ab12a5c5bcc10437e2cb75009132f3ce2db457b2d503bb62dc7e33 SHA512 e6b32e9d03c00934f5ed0c70dd29da036eee5a222c91a76c21c234a887b8634b017e7581fee1b8368770ddc4861f7867b0d6a671215188389ed758dc2124b156 WHIRLPOOL d126e1370ebff4877f14f1d27cdebcb979163133c88205b4cc0cc3b222ff48fc90b3d45fa3f9619b2861b9c295c84fe1a29950bd8a320ff4ee417997b253fce6
-MISC ChangeLog 7772 SHA256 2bb29b3ecdf6dfbf621a40ab9b0f84bc2faac0fa5399888eabe779d904ea1e57 SHA512 eb3332b7f579ca0c1a56089a48c9a77250224b2f860889609d24bca1fd9161ea1288829802e7ef895777d567967ec118d55a6c5e34d6631fe03d27ad7a3019cd WHIRLPOOL 5f3c8868818184b078c3b5778a3eb2bc20f3b55ec09462f2c39755c19b6286ddf3facc584f7d3e94efd823c3d76c983cd1797b92582d0d79537ae5987f7d093e
+EBUILD vienna-rna-2.1.1.ebuild 2772 SHA256 6f0e88f6ba9384ae471bcd0d42334046db5267fd2769a6185d61d46478640fd4 SHA512 c582d5e64ec3465fe120c370fdecb420dab13feecf9307b63d2806d79faf1cf4886354204bc38f0a42503cd40d9e335b337546094cdd3e912afac0567168690b WHIRLPOOL 2a53834a222d854d4487fed42470ed77de66b2319384792d5ef1d287b30c5bff153bf75923320aafd9c10054a86604bce29a032e80f9d8378e0535cdd2b650b1
+MISC ChangeLog 7972 SHA256 cf29ff4a6b123382b79473519848cffa3a8662c1c3abb2cc82cabaaab471a5fd SHA512 e6ab5c0b9948482f8a5cb715ee9d2848b2e8c8e49b9d62ac331fd1e86816df7c8b0cddf62a747c756d4af9dd10f2eefb788ab0e33430f3817056c0d63c301dee WHIRLPOOL 2322f70f240b21044d2b2c6c9bb743d2b644869aa73ab503304ebc0524526067c287fddaa8e21f8eb80288106883a43b8078d4b7e0e79863cbac6544fe743f27
MISC metadata.xml 1214 SHA256 7b2e9d412019304d74ae0175f40767d78b1668ff0173bb07618e23478337b165 SHA512 0c86849ca974997da0f4ef044a07d1eb963a02889b2a7cbf4e0b2e5dac09a6da58eaf1e492e387f0c059f1c8517f27a122a16c4fd8e92b54cf3a1e3ff6707def WHIRLPOOL c96b3021b444150a580ff9923d37a6e50ba2059d5e4bf8d812a60ff7216c338e974f94d2525d494487bbcd6c83f78580afde89a58ce85d7b0dfab7cad7502ea3
-----BEGIN PGP SIGNATURE-----
-Version: GnuPG v2.0.22 (GNU/Linux)
+Version: GnuPG v2
-iQIcBAEBCgAGBQJSysyhAAoJELnU8jG9FVirRQEP/0ZoiSE6YhUVT1ZoZ/t52MUO
-Vfhto0E3e5NZoyQV2GmjI0yTWQCRYJ+uVxxqhc9OOqVww1XbZHws+9rpQO6pEeK7
-uuYP19wI+VyK9Cy+VnpQQs8xi8oERp51vN2DgdNRGIWd2YX7r+3wGs623X+fJL0d
-vinYT9IH6U9/jAxBi5yKSLpA/vebC8guZnM3SMrhFj38iUu1GWHw/E8KzkTmvq1L
-XRIbSXGbjIjO0T7ecBdqjONkkhuVOEfNTgtItDUcIsZ2wf8Fivd7hJ2xDvT5NJ8k
-ZK9bYrsfGk6tA+05UqsbGnvuN7wWxnTf8yTa05xPm6AAap3oll2PGYcp9ttJf6C0
-GW9Rj0e+KBcQNz5SaXwLGAqH2TksPcFuCd7d5LzOhfYs/ocxSeXh8UQb3v1OdTMF
-obuQTMEedRTVD+gYJ5gmx0Ol3Egs4art6jodIlZNcOntdLUlNIQ+Toh2sktSAUMe
-4lzB2f2GKbkARZYIrfILX1wHTCxdT8+4NrbHjdnVrxnJGHvPo6sZFDJpPWD7K5vz
-aOlHEMdoiH46dly9rhT0xMVlNxUDJyBLlMLpqc5D6JP4JQ2xM3x2tM5RNzlxBQfl
-NzgzqN9erDWXvzJ27D60r82I28x0QAwS920Xqc+9Z1Xcozu0t16WtkhlCdik1qSH
-6wvNyV51HR7wwT0tRZIq
-=qqvx
+iQEcBAEBCAAGBQJUAJZ0AAoJECo/aRed9267Q2kH/jfeSJAYj7fhQqw71qnJnIJ+
+MNN29mZ0Az1raJ5KybUHtDjuIFwPaAYnwF2sgzVDsM3A2Du9VQJBGFalWNrllXPI
+eXida2s/ha1VY0li/db0D1bkDkszEwiaSbYf/exUMQSZrKun9sCy0jsvKHm2TYjU
+jtHZ4mKKLSKj6ya17fB364sITfOcwCtCY8kieBespne+33XyHoXooiOBjXMMyWLu
+fxDmWS1vLG5ENy4uCSZFseT6wSxomvZYxLv0Qy0h258wkXQpgxWWyxLL/8LGMvtm
+stLZfPMDcPPg4mOo1cNwD51SI7el6oAvl0aSjtq/qhTTf2GnmekTEp8k17ha2xM=
+=xMhL
-----END PGP SIGNATURE-----
diff --git a/sci-biology/vienna-rna/vienna-rna-2.1.1.ebuild b/sci-biology/vienna-rna/vienna-rna-2.1.1.ebuild
index a61b91a56051..b08644a1e515 100644
--- a/sci-biology/vienna-rna/vienna-rna-2.1.1.ebuild
+++ b/sci-biology/vienna-rna/vienna-rna-2.1.1.ebuild
@@ -1,12 +1,13 @@
-# Copyright 1999-2013 Gentoo Foundation
+# Copyright 1999-2014 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/vienna-rna/vienna-rna-2.1.1.ebuild,v 1.3 2013/09/05 19:44:48 mgorny Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/vienna-rna/vienna-rna-2.1.1.ebuild,v 1.4 2014/08/29 15:04:18 pinkbyte Exp $
EAPI=5
-PYTHON_COMPAT=( python{2_6,2_7} )
+PYTHON_COMPAT=( python2_7 )
DISTUTILS_OPTIONAL=true
AUTOTOOLS_AUTORECONF=true
+AUTOTOOLS_IN_SOURCE_BUILD=1
inherit autotools-utils distutils-r1 multilib perl-module toolchain-funcs
@@ -38,8 +39,6 @@ PATCHES=(
"${FILESDIR}"/${P}-impl-decl.patch
)
-AUTOTOOLS_IN_SOURCE_BUILD=1
-
src_prepare() {
sed -i 's/ getline/ v_getline/' Readseq/ureadseq.c || die
sed -i 's/@PerlCmd@ Makefile.PL/& INSTALLDIRS=vendor/' Perl/Makefile.am || die