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authorAndrey Kislyuk <weaver@gentoo.org>2009-09-04 19:30:55 +0000
committerAndrey Kislyuk <weaver@gentoo.org>2009-09-04 19:30:55 +0000
commit593a89861147edb9f7c0f1778434d991a639aa25 (patch)
treeb0cd335496acf5b6ef59a3e502d8180ba81b7e85 /sci-biology
parentVersion bump (but no mpi support in 7.2.2) (diff)
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Tweak build process
Package-Manager: portage-2.2_rc30/cvs/Linux x86_64
Diffstat (limited to 'sci-biology')
-rw-r--r--sci-biology/raxml/ChangeLog5
-rw-r--r--sci-biology/raxml/Manifest6
-rw-r--r--sci-biology/raxml/raxml-7.2.2.ebuild16
3 files changed, 17 insertions, 10 deletions
diff --git a/sci-biology/raxml/ChangeLog b/sci-biology/raxml/ChangeLog
index f12863898ccf..f1ef8bf99847 100644
--- a/sci-biology/raxml/ChangeLog
+++ b/sci-biology/raxml/ChangeLog
@@ -1,6 +1,9 @@
# ChangeLog for sci-biology/raxml
# Copyright 1999-2009 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/raxml/ChangeLog,v 1.2 2009/09/04 19:12:50 weaver Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/raxml/ChangeLog,v 1.3 2009/09/04 19:30:55 weaver Exp $
+
+ 04 Sep 2009; Andrey Kislyuk <weaver@gentoo.org> raxml-7.2.2.ebuild:
+ Tweak build process
*raxml-7.2.2 (04 Sep 2009)
diff --git a/sci-biology/raxml/Manifest b/sci-biology/raxml/Manifest
index 57491fa3d784..c3caa550fac8 100644
--- a/sci-biology/raxml/Manifest
+++ b/sci-biology/raxml/Manifest
@@ -1,6 +1,6 @@
DIST RAxML-7.0.4.tar.bz2 435099 RMD160 c3cc2fa38bf3cdbfcd4251400f572dccbb671288 SHA1 ee8bb3a07f89ff00d59872f970ac2159186255ff SHA256 d6affcfc214fcebbb5e017e38422b40468710575f072e484591c1ada19217a5c
-DIST RAxML-7.2.2.tar.bz2 183560 RMD160 93356bab984084316c920cb411d4570601dab1a6 SHA1 30e183bb09592d0297115e21455629192272a6d2 SHA256 eebdd51db22a1d2630e82d1b478eb66fc189e0101ef4e8ae6e56c7a4ca84a7f8
+DIST RAxML-7.2.2.tar.bz2 184132 RMD160 b2bec2d590c0899e245989d2f6e0ffba506d66cc SHA1 5c5bb777f150d6b7ee5051b82f8b3f398efd4ccf SHA256 294816da5e7c3ca6b766f6e95aa5f032447e22460518b6916853eb80b3491ba9
EBUILD raxml-7.0.4.ebuild 1156 RMD160 0f91a92b761421ed72d01a3e99a59833710a5ef8 SHA1 1e3b7db6ff5c26de591d720c5617d8c68fc2e84c SHA256 073e97cd8f9351893e2ea7c8f912e1284e859b0ccf8f6b1ac60444fcf466b6f6
-EBUILD raxml-7.2.2.ebuild 1130 RMD160 0f4d7c2fbda9a84b7e580816abfbe662b9900c39 SHA1 f7722427ff38075d04386d16b7479a7c2cc6b421 SHA256 dbe055536369d00f3868f6e659e44c6397db46aa191ec40cbbdc8bc35d779bfc
-MISC ChangeLog 505 RMD160 19c4c83360e7249ebe7c734f56ce1914ad36c5ec SHA1 4515ab4bad30144bd42744f04b2f2b18fa33e4b4 SHA256 04f4c5bca24fe74682340164f7197b725a95ac3826bcbc380172c083dde34c31
+EBUILD raxml-7.2.2.ebuild 1304 RMD160 cb9ea0baa14e69b975efde59e37951058da2e7ab SHA1 774e9b89255caaaabab4443a7b841487b2e2ad61 SHA256 ee1beb8b810311853bc6dea2e83e034e45bff0c77742377c7c3f0659d0f9fa8d
+MISC ChangeLog 598 RMD160 201fc64240c09960a1bfa0db8aba35341ec4dfcd SHA1 59d427090da825415b3575ec578c091c80359ca5 SHA256 62641b9b55ccf8c8609c68dce06fce9db219b96a32ce0e63b168c4257b8bf531
MISC metadata.xml 259 RMD160 d9d81b67d635fabd81aef8ae0edf971211ae9072 SHA1 8e32f751c67ff891fa35405a2cf6fb33752d6eb1 SHA256 541c3fbcf299d9a8ccf4132ee61f9e53a5d737cefdaa6fdc77764d8d4c7f3110
diff --git a/sci-biology/raxml/raxml-7.2.2.ebuild b/sci-biology/raxml/raxml-7.2.2.ebuild
index b112de055eea..0084739e5718 100644
--- a/sci-biology/raxml/raxml-7.2.2.ebuild
+++ b/sci-biology/raxml/raxml-7.2.2.ebuild
@@ -1,6 +1,6 @@
# Copyright 1999-2009 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/raxml/raxml-7.2.2.ebuild,v 1.1 2009/09/04 19:12:50 weaver Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/raxml/raxml-7.2.2.ebuild,v 1.2 2009/09/04 19:30:55 weaver Exp $
EAPI="2"
@@ -15,7 +15,7 @@ SLOT="0"
IUSE="+threads"
KEYWORDS="~amd64 ~x86"
-# errors compiling mpi for version 7.2.2. mpi is enabled by adding -DPARALLEL to CFLAGS
+# mpi is not supported in version 7.2.2. mpi is enabled by adding -DPARALLEL to CFLAGS
DEPEND="" # mpi? ( virtual/mpi )"
RDEPEND="${DEPEND}"
@@ -28,11 +28,15 @@ src_prepare() {
}
src_compile() {
- emake -f Makefile.SSE3.gcc || die
- if use threads; then emake -f Makefile.SSE3.PTHREADS.gcc clean && emake -f Makefile.SSE3.PTHREADS.gcc || die; fi
+ emake -f Makefile.gcc || die
+ emake -f Makefile.SSE3.gcc clean && emake -f Makefile.SSE3.gcc || die
+ if use threads; then
+ emake -f Makefile.PTHREADS.gcc clean && emake -f Makefile.PTHREADS.gcc || die
+ emake -f Makefile.SSE3.PTHREADS.gcc clean && emake -f Makefile.SSE3.PTHREADS.gcc || die
+ fi
}
src_install() {
- dobin raxmlHPC-SSE3 || die
- if use threads; then dobin raxmlHPC-PTHREADS-SSE3 || die; fi
+ dobin raxmlHPC raxmlHPC-SSE3 || die
+ if use threads; then dobin raxmlHPC-PTHREADS raxmlHPC-PTHREADS-SSE3 || die; fi
}