diff options
| author |   Justin Lecher <jlec@gentoo.org> | 2014-03-23 15:29:14 +0000 |
|---|---|---|
| committer | Justin Lecher <jlec@gentoo.org> | 2014-03-23 15:29:14 +0000 |
| commit | 6295a6ae6668d836c30d2c61c99c2bda725ee140 (patch) | |
| tree | 78edb3a33624146af3ae8e014c16e386cbd38dac /sci-biology | |
| parent | Version bump, fixes #505434 and #503478 (diff) | |
| download | historical-6295a6ae6668d836c30d2c61c99c2bda725ee140.tar.gz historical-6295a6ae6668d836c30d2c61c99c2bda725ee140.tar.bz2 historical-6295a6ae6668d836c30d2c61c99c2bda725ee140.zip | |
sci-biology/samtools: Fix symlink creation, thanks Martin Mokrejs telling me that
Package-Manager: portage-2.2.8-r1/cvs/Linux x86_64
Manifest-Sign-Key: 0xB9D4F231BD1558AB!
Diffstat (limited to 'sci-biology')
| -rw-r--r-- | sci-biology/samtools/ChangeLog | 8 | ||||
| -rw-r--r-- | sci-biology/samtools/Manifest | 14 | ||||
| -rw-r--r-- | sci-biology/samtools/samtools-0.1.19-r2.ebuild (renamed from sci-biology/samtools/samtools-0.1.19-r1.ebuild) | 4 |
3 files changed, 11 insertions, 15 deletions
diff --git a/sci-biology/samtools/ChangeLog b/sci-biology/samtools/ChangeLog index 32a3651a742a..4b723ff0aaa6 100644 --- a/sci-biology/samtools/ChangeLog +++ b/sci-biology/samtools/ChangeLog @@ -1,6 +1,12 @@ # ChangeLog for sci-biology/samtools # Copyright 1999-2014 Gentoo Foundation; Distributed under the GPL v2 -# $Header: /var/cvsroot/gentoo-x86/sci-biology/samtools/ChangeLog,v 1.16 2014/02/11 20:17:25 grobian Exp $ +# $Header: /var/cvsroot/gentoo-x86/sci-biology/samtools/ChangeLog,v 1.17 2014/03/23 15:29:13 jlec Exp $ + +*samtools-0.1.19-r2 (23 Mar 2014) + + 23 Mar 2014; Justin Lecher <jlec@gentoo.org> -samtools-0.1.19-r1.ebuild, + +samtools-0.1.19-r2.ebuild: + Fix symlink creation, thanks Martin Mokrejs telling me that 11 Feb 2014; Fabian Groffen <grobian@gentoo.org> samtools-0.1.19-r1.ebuild: Reference correct library name on Darwin, thanks Linlin Yan in bug #491812 diff --git a/sci-biology/samtools/Manifest b/sci-biology/samtools/Manifest index 20a2c539c0bd..2e4b88f0972b 100644 --- a/sci-biology/samtools/Manifest +++ b/sci-biology/samtools/Manifest @@ -1,6 +1,3 @@ ------BEGIN PGP SIGNED MESSAGE----- -Hash: SHA256 - AUX samtools-0.1.19-buildsystem.patch 6227 SHA256 44c6e4df3ceb36e539716350ef10e0f4e348d524c5dfdb96ad7c9ccbed9570d0 SHA512 dd41a0ab20ad216273f38b42e6abafd70378bcf966403379e73d08c93e92f04ee79dae07baf7f626b30d57deea29d56a729928c18c5d012d950cfe10912adf3d WHIRLPOOL 9ba69f11b8071fe1c9a3269a482e1de0c6563a0a94b96bcef97a1442a6e4d594aea55b4e1c75381b6ed792e7e3e3809da80c9b8a22ec74af63c14315a51e9771 DIST samtools-0.1.12a.tar.bz2 355633 SHA256 377ed5cd2a4bb2b1ad572ca6fcafdd8ed644b67f01ab00fa020618fac11e59ac DIST samtools-0.1.18.tar.bz2 379306 SHA256 f3faaf34430d4782956562eb72906289e8e34d44d0c4d73837bdbeead7746b16 SHA512 fab570e0604f68046bb71a151b816315aeeeafbc970070f9b131975fe8fcf6ca0b5e02693bbde047bbe4d1500f6ff244d3d952219f69d5798af77ce9a3b643e3 WHIRLPOOL 6a430161ef382a501130436735495d3e97200b1018b3a77f5d367248d64179f2da7e84863a6699bdcff9d422d5c14a3f3f12d26a34a6a9e70d9ce4a358cb3f49 @@ -9,13 +6,6 @@ EBUILD samtools-0.1.12.ebuild 827 SHA256 7f8dec32073313ec5a0a7801bcaf7675d74f4ee EBUILD samtools-0.1.18-r2.ebuild 1406 SHA256 a75fd5cf7c0a1028fa651af62f65950094b30aaa21e0fe5265f3c86c63041e99 SHA512 b869ea1b1c0c139e74b39bf483e08dbcf7e724223d47ec064b77a4bacb23ecc04ed0e88b720b77144122326fa92efd4493dc96aaa65a674656f7e56ec41abbf9 WHIRLPOOL 5b63de252f99ffc57c9d9fbc6b85cb4c930dc9204d9f67eb7804207328536c8f7ebaf97bd5e8fbc3b2133bfe82d42f33eb177a2f4eb65a447444de7ceb3bcbb6 EBUILD samtools-0.1.18-r3.ebuild 1416 SHA256 d6280443eabd20364429fee878ca3d12cd3e71043a8124fe15b53c0760ffeaaa SHA512 626318290d9630ae9610e12c91438b14bfd179ef34b0b5369f9fef50ea1f3b9b25b5312e3f355c2ed3f542a0395cc0661567d7f38f51534b9403478a48f0b69a WHIRLPOOL c88757966519ca99cd290395bb83b933192e3cf0d0591c7c0ef4c2fa8e619b49e4c083f30ef047d3d4de971ade42ddc8ec84a8e96618a796dc4c856f8b44efdc EBUILD samtools-0.1.18.ebuild 1279 SHA256 cbef9ae66a539aca394d7a40c271cfcdceb728be90a675b77e2766e11a12797a SHA512 c7be05290b92939744dca90f1a47f691ee2a0ca50489284ee21ecf5d61e26baf6ee9dad2c989c5644a5409643dc68f8c525385165d51a0d171b547af5b2f56a9 WHIRLPOOL 702ce86885ac716e0e40c66c1c55926cd10f0f335d0084099ea6b29d895f09f2b6df915dd3d802928c0c6af78444e7746e4109b5ec9fcc8290340f3bb171b7e8 -EBUILD samtools-0.1.19-r1.ebuild 1467 SHA256 d12c17ca3294021e388307fc763b63dc0cbeb0e41f65b8adb5f3a391e250b23d SHA512 166346b3d5ac70baf1532816a4af62fc1615f0395d299dde5c7616db499195c7a1247ec8a993ece85fc23c183edff81cdee1a6c9dc47c521b4cf4d5d26cb7316 WHIRLPOOL 97752a00c95e218b745aa37ff67230715518c4236942d803689d07b6a4529b3bf19ee6b9bb6c717de9d52583bf43fcfd07f97edfd4d47d83c8522a61b1ec317e -MISC ChangeLog 3186 SHA256 c982000406953cc24cae55d05d4b8e95d56e36dd3401bc6e7df07bfadcc19f77 SHA512 5a783bbcc90118f37bc7de5f314957a1bfb46cf82562a603ecb179c11746903b862c264b49d7d0c418960bd4841889dbafb626396abad70be2c9ba3fb37a81e7 WHIRLPOOL 1f653cf93d49dbe199083ccc853a7a3a1466ae2d898138a365de52932732271d24beb06ff34232845d9d709606194f6050edba8106070c31ef83dcec58f97ba1 +EBUILD samtools-0.1.19-r2.ebuild 1465 SHA256 330389e3fba7348b478d2311f0b768e16a5452eee959a55a3ba1f223ed68cefb SHA512 387563e96f65af60afb657b12c58b1260d95aedb98e8f86f0af7b9c5712afddec541ad4e6330e40aca7aea2f723aaffab41c177fde2860a00c84f73e1738f1d4 WHIRLPOOL 1f3017d1fc2d073adad8abd064b6ca512550ae09bafb8cfa04336aa5cf17497e1997490f443f27e8ab2741061fbfbf63e60555b7b94c394c7a5043ac0d1858ca +MISC ChangeLog 3386 SHA256 a1d9955053d0b2dc25927293e5452fb608959629b622d77da854775c8c4650ce SHA512 ce92f96c33e293ad706f199a92c5f58d7b0e71174f5d89da6e5cc3def8574c15280cd4419335db90551e9040761a19c2654ab6950bac47c920c326b353221ff7 WHIRLPOOL 82775740fc4ec94d0c598399fd83efcbf5f22cbb07744b5b5c8f1df1b2143ea041ca15e15d18adf44355833eca4d5fb4cc41f975b58f31eeca5ef1cdf2327ca8 MISC metadata.xml 166 SHA256 29b228f683c71345323d841414e410c929a320f34536eb30910498728260c8ac SHA512 51c5345bb1c4466b73e2feac8895c64fc119365e7f2c156702f4c93664d3aba028b3da9daaabf24f61a88220345fca7806771a252e8ae906cac5dec97862c7e0 WHIRLPOOL 211bf955d94fc1d93b12388a2c597a8d440fb5d78f84d59b2549569537098c3525b1fbab707441d62fabe20edcac2fd9ebe09c5d9870f1c9558d7ee90d5db5b3 ------BEGIN PGP SIGNATURE----- -Version: GnuPG v2.0.22 (SunOS) - -iEYEAREIAAYFAlL6hVYACgkQX3X2B8XHTon4+QCePKO6GMzJ+XXJGVenEl6PVMGq -nuYAnA67r/hRcSdZWsI4OD6iDJc2V1LJ -=EUG7 ------END PGP SIGNATURE----- diff --git a/sci-biology/samtools/samtools-0.1.19-r1.ebuild b/sci-biology/samtools/samtools-0.1.19-r2.ebuild index 8b6f6ecc402f..a105de74248f 100644 --- a/sci-biology/samtools/samtools-0.1.19-r1.ebuild +++ b/sci-biology/samtools/samtools-0.1.19-r2.ebuild @@ -1,6 +1,6 @@ # Copyright 1999-2014 Gentoo Foundation # Distributed under the terms of the GNU General Public License v2 -# $Header: /var/cvsroot/gentoo-x86/sci-biology/samtools/samtools-0.1.19-r1.ebuild,v 1.2 2014/02/11 20:17:24 grobian Exp $ +# $Header: /var/cvsroot/gentoo-x86/sci-biology/samtools/samtools-0.1.19-r2.ebuild,v 1.1 2014/03/23 15:29:13 jlec Exp $ EAPI=5 @@ -46,7 +46,7 @@ src_install() { python_replicate_script "${ED}"/usr/bin/varfilter.py dolib.so libbam$(get_libname 1) - dosym libbam$(get_libname 1) /usr/$(get_libdir)/libba$(get_libname) + dosym libbam$(get_libname 1) /usr/$(get_libdir)/libbam$(get_libname) insinto /usr/include/bam doins *.h |