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authorJustin Lecher <jlec@gentoo.org>2013-02-28 15:01:39 +0000
committerJustin Lecher <jlec@gentoo.org>2013-02-28 15:01:39 +0000
commitb6e88309aeee909bc6b1a43c57fd19266db1de46 (patch)
treeecb26344df6ee07b602d21f20f76692747cc4f6c /sci-chemistry/dssp
parentStable for HPPA (bug #458990). (diff)
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sci-chemistry/dssp: Drop old
Package-Manager: portage-2.2.0_alpha163/cvs/Linux x86_64 Manifest-Sign-Key: 0x70EB7916
Diffstat (limited to 'sci-chemistry/dssp')
-rw-r--r--sci-chemistry/dssp/ChangeLog8
-rw-r--r--sci-chemistry/dssp/Manifest28
-rw-r--r--sci-chemistry/dssp/dssp-070831.ebuild46
-rw-r--r--sci-chemistry/dssp/metadata.xml8
4 files changed, 23 insertions, 67 deletions
diff --git a/sci-chemistry/dssp/ChangeLog b/sci-chemistry/dssp/ChangeLog
index 51b295d074cc..c14c6fe7b9c4 100644
--- a/sci-chemistry/dssp/ChangeLog
+++ b/sci-chemistry/dssp/ChangeLog
@@ -1,6 +1,10 @@
# ChangeLog for sci-chemistry/dssp
-# Copyright 1999-2012 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/dssp/ChangeLog,v 1.7 2012/06/13 11:01:38 jlec Exp $
+# Copyright 1999-2013 Gentoo Foundation; Distributed under the GPL v2
+# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/dssp/ChangeLog,v 1.8 2013/02/28 15:01:38 jlec Exp $
+
+ 28 Feb 2013; Justin Lecher <jlec@gentoo.org> -dssp-070831.ebuild,
+ metadata.xml:
+ Drop old
*dssp-0.70831 (13 Jun 2012)
diff --git a/sci-chemistry/dssp/Manifest b/sci-chemistry/dssp/Manifest
index aae937eb385e..5a5c0b7a4f8b 100644
--- a/sci-chemistry/dssp/Manifest
+++ b/sci-chemistry/dssp/Manifest
@@ -1,21 +1,19 @@
-----BEGIN PGP SIGNED MESSAGE-----
-Hash: SHA512
+Hash: SHA256
-AUX Makefile 237 RMD160 e7c5528bcf5d5d514c0ff2a58019d1570c3ba932 SHA1 497481dac448abe16e73517d6c25ab760b992bea SHA256 4caa74d9736641485b2e977f0b810f692b8afde933d80947da338c56a6f53510
-AUX dssp-2.0.4-gcc47.patch 1518 RMD160 e711b2e8bfac33ba3ff64dab0c9927d109325e2e SHA1 8ce1c3b93da2c5e204a7e07a7390b0d64183f381 SHA256 869deac0af501fae6588ef2f8223d22af987ad7e7035b61d4d3bf94175221638
-AUX dssp-2.0.4-gentoo.patch 1931 RMD160 ce0c3a11f48132021dcc571e82bc12a4de9d96cc SHA1 d9b24b73e3d6eb27032bff332b0fa78990327bb9 SHA256 5eb675b623aecd9fd6574a2dfcec4c70e71b7aa56815426067bcd6e6a9af3e78
-DIST dssp-070831cmbi.tar.gz 451919 RMD160 656e1be2c5db6150a3db2785bcaf874632b3cf27 SHA1 40ffc8fcd1400eb4675285995f1c366ff6612004 SHA256 bf5cdd970f92fd80268b87a468d4efe891d3227fd15136147889605299f75661
-DIST dssp-2.0.4.tgz 33515 RMD160 4aef95c7921c1fc7e17b831e1ad08c6eaf8033d0 SHA1 af7e15f16a732bed4f6631557d6c84bffbb934bc SHA256 9444f36a26c003c5578aa863c3725ff23b0511abe7d7fc873dbd8294dcb2b66b
-EBUILD dssp-0.70831.ebuild 1144 RMD160 7db29cf9fe87c8262378be05b7aa07ff7e717cb1 SHA1 aee5c23a9852488d498129548bada834ea83a534 SHA256 c63b329b493a70368f51dd5ccdcb83b83819c723d1b78a190862ab79bd459005
-EBUILD dssp-070831.ebuild 1142 RMD160 d2d236533b5a400e0460a90d16e1b8f048631a11 SHA1 40333b34be248dd935aba37d6eeed6bef7903f3a SHA256 c9ea78cecb6a2695236e27c2f0681d900fb59053093388058a6e965398ef3e71
-EBUILD dssp-2.0.4.ebuild 894 RMD160 8ba31475c92da3d9e721cb8316476dc742769081 SHA1 7b936deb7c889874cb6c3f8ccbee3c308ac17b81 SHA256 932433966d50312f8637951d832a328e7c159d12594ad07c0b0016432d547f1b
-MISC ChangeLog 1733 RMD160 1b6f8229551f779dc88659abb1661df41f459334 SHA1 79cad7564fbe62435fbd56f2f3e84c49ff24d3bc SHA256 a7f33a4bc42a77fb22930014553adf9257d1d21f505430aade1b54b4924fc836
-MISC metadata.xml 219 RMD160 e9da2d4271f89b9dbac478d145a519318f0f3314 SHA1 6d4a101013d6a40cd61cb2d8c6b517c443013bc7 SHA256 0be94b46df4c9a73494034f33b1371769951f52890e5c857ebe1dc9bc729d0a8
+AUX Makefile 237 SHA256 4caa74d9736641485b2e977f0b810f692b8afde933d80947da338c56a6f53510 SHA512 36e0434fbc2cdba29b9fcf96b3884649c03800a0b6653b62d2884ea871342afaf690a534e712a6f08375cb50f51a3bdca2cadd0cdc0002c28c92bf379ab28486 WHIRLPOOL c9c2ac927e3bd0c38c29bb92516ca36b92273775f2e8b680d4b9c8b4befe7beb9b29947864ee19145eeb956d381dc6e5893fcc5dfd2504833d5f8a92732f1703
+AUX dssp-2.0.4-gcc47.patch 1518 SHA256 869deac0af501fae6588ef2f8223d22af987ad7e7035b61d4d3bf94175221638 SHA512 afaa5ca888b745e482cb4f77345cd00dac14fa8367fa10c95175f9b8a0850ad3a56ccfd1a4ec497a3350929f45c1fc1565218a8bc4d6f8b5e80d7a279c93e8d0 WHIRLPOOL 3584b60d0e63dc151e4cee437d56934a3714bb43ea9536e5c56ef462dfb326d4866b69aca44e1935a68273f76090a3f9d4fc545aaa5e1772bf2766e87ed37c8d
+AUX dssp-2.0.4-gentoo.patch 1931 SHA256 5eb675b623aecd9fd6574a2dfcec4c70e71b7aa56815426067bcd6e6a9af3e78 SHA512 2e22296f344ed6bf3165c9e271332d5ed91d8e648babbdad95d721e4a9305154cbce71e044071b2c6a3ce74b65c5a85670c776bd369eb5f5cbf8e43bdfd7fed9 WHIRLPOOL 34129e782b8c2f058ed1df33c2eb254a53ae0e38b0e4942d70868d78fdd1c29476dff1f43757314143561b85a85bb655c5bae883cc720ff08a20a070af811492
+DIST dssp-070831cmbi.tar.gz 451919 SHA256 bf5cdd970f92fd80268b87a468d4efe891d3227fd15136147889605299f75661 SHA512 bb845fa83ec5726884a123073021cf6fcc87456b5a796c7033332c0b84def1258c8729d6c86a76f90dc26cc65d2f1685bcf3917b3caca25fe999a2297edac617 WHIRLPOOL c0bf8ad059d7d04bac24b5f415807164552b86bc7f4c08eee75dbe916ccf11e2379ceec084f1cc1cc26d59d5380f4b1dae2b522698ad1907aecfa6d30e89bc72
+DIST dssp-2.0.4.tgz 33515 SHA256 9444f36a26c003c5578aa863c3725ff23b0511abe7d7fc873dbd8294dcb2b66b SHA512 bdb6faf7628fc50c38882c6d4cc18eedaacfc4d55c61bc873cc2d06378d1e782b7bfb2b168442f24b40dcdc2bedb9e08a2c3072ef23735650787ea792476f3c3 WHIRLPOOL 9b3177099e1e9c3424b9a158da52dc51c27736e70000ddde11d163b67eb47a52d0fbc61ea34663ba24d9cbb499d7119bb6bd6417b661bf3eca103e8644a8c24b
+EBUILD dssp-0.70831.ebuild 1144 SHA256 c63b329b493a70368f51dd5ccdcb83b83819c723d1b78a190862ab79bd459005 SHA512 dd4a86416bfe26a6aeb1e58dc81cfc326b7cd4b40d98e3a3b814d174bb4a2c31d3356025260ddd84cd4ff872b072fd8a796c94da1b6cfe22e4c1e35906a26c5b WHIRLPOOL 9d29c633c252a39a29e35d6fd2dfed74814e3fe2894e6d53e5eee20b16a6c6ad1f52a823aaf09872dfd64cdcf41125c997318cdc2779821b58f105fb86fb305a
+EBUILD dssp-2.0.4.ebuild 894 SHA256 932433966d50312f8637951d832a328e7c159d12594ad07c0b0016432d547f1b SHA512 fe239f844b6379a80b98ff5a52b4c98ec63bf90dd2091b9cd5fd1c8b5583b09b2c16f792c8382826222d54837abfebaa85eeaa2e9b85578a8e95943c3e714f09 WHIRLPOOL ff759ce0090bc6ddb485d8364c737bed2f0f24ebc427519c26993f05ff76bed943910b8cf94e90debd75c249aef2ad74cb0b2fad891be1000798b382e513c1d6
+MISC ChangeLog 1829 SHA256 17811af00f344598cfc47d9492e82fb50e8e7b0df581d0b1314c23f86d324a9b SHA512 a8f8bb382c99c5de25c54a26b52149e4246d65a0f890a68ed1e6b10e32fc53ee39b95da59759915c7de7ba84b4c5c0c5ea84983be803f60c0cce4e0ac0e02508 WHIRLPOOL 7c4646da0e8f562d75fa194bb9c05ebe30266258155089172be075fb96b888e8d86b026a201aa0eb8b1dab808511e7770a921a6ff3f101696cbe278b7a5bfea3
+MISC metadata.xml 224 SHA256 84b014a026c2945b1b4c6eda4a4576b09039b36c27c2f9f8920ae146a8acfa3e SHA512 3b70a09392d7a939bc59e483e63789152e8dc73351dc682548a47db282224b5d9df7eac8c51bca9847e0b647f88fe2a1e4059ffe262c89a84002a13507fb3586 WHIRLPOOL 078ad63719dd7c12015a2e69f1f00322eda7e4a85f8499b89779a9bdedc92e11bb6c8cb28d6cbdc61c144fe5f22b11264d65a06cc2e67d09a0e4ef37529df71a
-----BEGIN PGP SIGNATURE-----
Version: GnuPG v2.0.19 (GNU/Linux)
-Comment: GPGTools - http://gpgtools.org
-iEYEAREKAAYFAk/YcxkACgkQgAnW8HDreRZW/ACgwgDAgOnjMd46qGLn9TtmFcxo
-T54An21T2Hm6X0ZvLr7B6tT1vbemR+3j
-=Z1mr
+iEYEAREIAAYFAlEvcVMACgkQgAnW8HDreRYKkACdFvKwpUN/1kI24whpkL4PulnR
+HaMAoKljB0gU3+m9peLqO51VJXZjbMy3
+=VV41
-----END PGP SIGNATURE-----
diff --git a/sci-chemistry/dssp/dssp-070831.ebuild b/sci-chemistry/dssp/dssp-070831.ebuild
deleted file mode 100644
index 55666b872a25..000000000000
--- a/sci-chemistry/dssp/dssp-070831.ebuild
+++ /dev/null
@@ -1,46 +0,0 @@
-# Copyright 1999-2010 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/dssp/dssp-070831.ebuild,v 1.3 2010/07/15 20:31:36 maekke Exp $
-
-EAPI="2"
-
-inherit toolchain-funcs flag-o-matic
-
-DESCRIPTION="The protein secondary structure standard"
-HOMEPAGE="http://swift.cmbi.ru.nl/gv/dssp/"
-#SRC_URI="ftp://ftp.cmbi.ru.nl/pub/molbio/software/dsspcmbi.tar.gz"
-SRC_URI="${P}cmbi.tar.gz"
-
-LICENSE="free-noncomm"
-SLOT="0"
-KEYWORDS="amd64 x86 ~amd64-linux ~x86-linux"
-IUSE=""
-RESTRICT="fetch"
-
-S="${WORKDIR}"/${PN}
-
-pkg_nofetch() {
- elog "Download ftp://ftp.cmbi.ru.nl/pub/molbio/software/dsspcmbi.tar.gz --"
- elog "Rename it to ${A} and place it in ${DISTDIR}"
-}
-
-src_prepare() {
- cp "${FILESDIR}"/Makefile .
- append-flags -DGCC
-}
-
-src_compile() {
- emake CC="$(tc-getCC)" || die
-}
-
-src_install() {
- dobin dssp || die
- dodoc README.TXT || die
- dohtml index.html || die
-}
-
-pkg_postinst() {
- elog "Go to ${HOMEPAGE} and return the license agreement."
- elog "One of its requirements is citing the article:"
- elog "Kabsch, W. & Sander, C. Biopolymers 22:2577-2637 (1983)."
-}
diff --git a/sci-chemistry/dssp/metadata.xml b/sci-chemistry/dssp/metadata.xml
index 210ad0db014c..5ef07a39e7e1 100644
--- a/sci-chemistry/dssp/metadata.xml
+++ b/sci-chemistry/dssp/metadata.xml
@@ -1,8 +1,8 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <herd>sci</herd>
- <maintainer>
- <email>jlec@gentoo.org</email>
- </maintainer>
+ <herd>sci</herd>
+ <maintainer>
+ <email>jlec@gentoo.org</email>
+ </maintainer>
</pkgmetadata>