diff options
author | Justin Lecher <jlec@gentoo.org> | 2011-06-29 11:51:15 +0000 |
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committer | Justin Lecher <jlec@gentoo.org> | 2011-06-29 11:51:15 +0000 |
commit | 9577d4b8cf3efac32bf00fe3719a68a558095e47 (patch) | |
tree | 68529b7a8679bf018438cf5dd865dbf9fdc10109 /sci-chemistry | |
parent | mico-2.3.13-r5: try to find bug#343827 via extra patch upon USE=findbug (diff) | |
download | historical-9577d4b8cf3efac32bf00fe3719a68a558095e47.tar.gz historical-9577d4b8cf3efac32bf00fe3719a68a558095e47.tar.bz2 historical-9577d4b8cf3efac32bf00fe3719a68a558095e47.zip |
Fix blocking of refmac-5.6, EAPI bump
Package-Manager: portage-2.2.0_alpha41/cvs/Linux x86_64
Diffstat (limited to 'sci-chemistry')
-rw-r--r-- | sci-chemistry/makecif/ChangeLog | 8 | ||||
-rw-r--r-- | sci-chemistry/makecif/Manifest | 15 | ||||
-rw-r--r-- | sci-chemistry/makecif/makecif-5.6.6-r1.ebuild | 41 | ||||
-rw-r--r-- | sci-chemistry/makecif/makecif-5.6.6.ebuild | 13 | ||||
-rw-r--r-- | sci-chemistry/makecif/metadata.xml | 12 |
5 files changed, 68 insertions, 21 deletions
diff --git a/sci-chemistry/makecif/ChangeLog b/sci-chemistry/makecif/ChangeLog index 56774bc8f979..9367a3663243 100644 --- a/sci-chemistry/makecif/ChangeLog +++ b/sci-chemistry/makecif/ChangeLog @@ -1,6 +1,12 @@ # ChangeLog for sci-chemistry/makecif # Copyright 1999-2011 Gentoo Foundation; Distributed under the GPL v2 -# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/makecif/ChangeLog,v 1.9 2011/06/21 16:03:09 jlec Exp $ +# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/makecif/ChangeLog,v 1.10 2011/06/29 11:51:15 jlec Exp $ + +*makecif-5.6.6-r1 (29 Jun 2011) + + 29 Jun 2011; Justin Lecher <jlec@gentoo.org> makecif-5.6.6.ebuild, + +makecif-5.6.6-r1.ebuild, metadata.xml: + Fix blocking of refmac-5.6, EAPI bump 21 Jun 2011; Justin Lecher <jlec@gentoo.org> makecif-5.6.6.ebuild: Add dependency on virtual/fortran diff --git a/sci-chemistry/makecif/Manifest b/sci-chemistry/makecif/Manifest index 72b7bce20a35..8389fe97939f 100644 --- a/sci-chemistry/makecif/Manifest +++ b/sci-chemistry/makecif/Manifest @@ -1,15 +1,16 @@ -----BEGIN PGP SIGNED MESSAGE----- -Hash: SHA1 +Hash: SHA512 AUX 5.6.6-makefile.patch 3713 RMD160 9ea6ed99a99132dee094148162ddbf6a66718d69 SHA1 3b7455469a573033646b1cebcaab2b24b7c23659 SHA256 a0ceb0a8e68c58c3bb568f7700a9594956f4dae6f63920d0ce812ef1650abf43 DIST makecif-5.6.6.tar.gz 3797710 RMD160 f5b914ccf135e8adf2867d6fd19113d7f2808fad SHA1 3ffa1543980cc8babfcf08786a46ef8850cb42d6 SHA256 fdcc1bee70583da3161f0d46eb792d965c04f08f0ad3033f730486550e859d1f -EBUILD makecif-5.6.6.ebuild 857 RMD160 c149f3486f1002304f58301554789379c85f1ca2 SHA1 0fcbc83b2916cf63bfa577c4cfb6a172191eedd7 SHA256 e7b0eb7c28926decfc90bbb0bdfda6740d5436a0ca7da9e1625862c4733964f9 -MISC ChangeLog 1150 RMD160 ea2ce8898cb25b618d9cb7f5d0b0dfc65cf00131 SHA1 a4fa4f3a4e40da7d312685aac769c9e71c563efb SHA256 3356a2dd28e097582356eb89751ef5f1a5fe6171d3f6172ef44ce88b63a076b3 -MISC metadata.xml 517 RMD160 c2ed5af79224585a4997fc3fad6b61709d7ce11f SHA1 c18997d00b6d3f696b5df3f71a71ce342f5ac8c2 SHA256 f7528f1e90b532ef40dd7eeddcb71718c4f4658f766cc0b66a29802e36ef6746 +EBUILD makecif-5.6.6-r1.ebuild 843 RMD160 131898f8dee4a5866365c2ba6b0ff5b3a98a21ee SHA1 9c2c2284d78e4b0d013d52eeacecda1dde8143f2 SHA256 a4b34878e8140780271211be4a37e1e8672f15df1b20e532c04257f1781dfc37 +EBUILD makecif-5.6.6.ebuild 856 RMD160 ad36ee94d12a74e3d14f8dc27d0dccc076cbe279 SHA1 9a33c661b70636e8fe1a7085bcfe706daedd67f4 SHA256 94478c1dc07c293feda4cd7ee19fac670660d13ce167e34893d18804e34e46b6 +MISC ChangeLog 1336 RMD160 677200b62d5b409873798d13e6ea8978e1d01eb7 SHA1 eef2fa6e2a1b1edf1abcbf78bbc0d001c16e360c SHA256 4eab468d4c31156e6a86a72fb01578fd6e49ad909be506eac219bf21f0784b1b +MISC metadata.xml 519 RMD160 467001b6faeb273a8ebf305ae33c758ced0c2dff SHA1 7ed439e0f62f630f06c130206a17e972178835a7 SHA256 80b0b422642f9a790eb8c1b259cfb4d63dbba0297dcb029da31dddd5d3c91e16 -----BEGIN PGP SIGNATURE----- Version: GnuPG v2.0.17 (GNU/Linux) -iEYEARECAAYFAk4AwL4ACgkQgAnW8HDreRZCIACeKDhmVErGynIpBJYnxcxnYuu2 -xlAAoMSHES3TQ+zfcORaxj7YY/2/4TDk -=+/N1 +iEYEAREKAAYFAk4LEb0ACgkQgAnW8HDreRaXywCgvm5ugvuZpswsRtQ3m9wH7HS9 +DFIAnjrVypAm/qTqE5hhFVX3qdPyeEeo +=hKuF -----END PGP SIGNATURE----- diff --git a/sci-chemistry/makecif/makecif-5.6.6-r1.ebuild b/sci-chemistry/makecif/makecif-5.6.6-r1.ebuild new file mode 100644 index 000000000000..1484ea658bf3 --- /dev/null +++ b/sci-chemistry/makecif/makecif-5.6.6-r1.ebuild @@ -0,0 +1,41 @@ +# Copyright 1999-2011 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 +# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/makecif/makecif-5.6.6-r1.ebuild,v 1.1 2011/06/29 11:51:15 jlec Exp $ + +EAPI=4 + +inherit eutils fortran-2 toolchain-funcs + +DESCRIPTION="PDB --> CIF convertor" +HOMEPAGE="http://www.ysbl.york.ac.uk/~alexei/makecif.html" +SRC_URI="mirror://gentoo/${P}.tar.gz" + +SLOT="0" +KEYWORDS="~amd64 ~ppc ~x86 ~amd64-linux ~x86-linux" +LICENSE="ccp4" +IUSE="" + +S="${WORKDIR}"/${PN} + +DEPEND=" + !>=sci-chemistry/refmac-5.6 + virtual/fortran" +RDEPEND="${DEPEND} + sci-libs/monomer-db" + +src_prepare() { + epatch "${FILESDIR}"/${PV}-makefile.patch +} + +src_compile() { + emake -C src clean + emake \ + -C src \ + BLANC_FORT="$(tc-getFC) ${FFLAGS}" \ + LDFLAGS="${LDFLAGS}" +} + +src_install() { + dobin bin/* + dodoc readme +} diff --git a/sci-chemistry/makecif/makecif-5.6.6.ebuild b/sci-chemistry/makecif/makecif-5.6.6.ebuild index 9844ea22b7d0..2ac244edf3be 100644 --- a/sci-chemistry/makecif/makecif-5.6.6.ebuild +++ b/sci-chemistry/makecif/makecif-5.6.6.ebuild @@ -1,8 +1,8 @@ # Copyright 1999-2011 Gentoo Foundation # Distributed under the terms of the GNU General Public License v2 -# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/makecif/makecif-5.6.6.ebuild,v 1.9 2011/06/21 16:03:09 jlec Exp $ +# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/makecif/makecif-5.6.6.ebuild,v 1.10 2011/06/29 11:51:15 jlec Exp $ -EAPI="3" +EAPI=3 inherit eutils fortran-2 toolchain-funcs @@ -18,11 +18,10 @@ IUSE="" S="${WORKDIR}"/${PN} DEPEND=" - virtual/fortran - " -RDEPEND=" - sci-libs/monomer-db - !<sci-chemistry/refmac-5.5.0110-r1" + !>=sci-chemistry/refmac-5.6 + virtual/fortran" +RDEPEND="${DEPEND} + sci-libs/monomer-db" src_prepare() { epatch "${FILESDIR}"/${PV}-makefile.patch diff --git a/sci-chemistry/makecif/metadata.xml b/sci-chemistry/makecif/metadata.xml index fc1a45358926..993c1d1ffcda 100644 --- a/sci-chemistry/makecif/metadata.xml +++ b/sci-chemistry/makecif/metadata.xml @@ -1,12 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> -<herd>sci-chemistry</herd> -<maintainer> - <email>jlec@gentoo.org</email> -</maintainer> -<longdescription> -PDB --> CIF convertor + <herd>sci-chemistry</herd> + <maintainer> + <email>jlec@gentoo.org</email> + </maintainer> + <longdescription> +PDB - CIF convertor check and create correct structure description create the list of restraints create dictionary description of new ligands |