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authorJustin Lecher <jlec@gentoo.org>2014-04-26 15:40:12 +0000
committerJustin Lecher <jlec@gentoo.org>2014-04-26 15:40:12 +0000
commitac441a5000ab7927c800256236fed50c0fd43652 (patch)
tree2bc106b800eb1fa6b661a6793d1d495936c75c67 /sci-chemistry
parenttake out white space (diff)
downloadhistorical-ac441a5000ab7927c800256236fed50c0fd43652.tar.gz
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sci-chemistry/aria: Drop old, #508740
Package-Manager: portage-2.2.10/cvs/Linux x86_64 Manifest-Sign-Key: 0xB9D4F231BD1558AB!
Diffstat (limited to 'sci-chemistry')
-rw-r--r--sci-chemistry/aria/ChangeLog5
-rw-r--r--sci-chemistry/aria/Manifest32
-rw-r--r--sci-chemistry/aria/aria-2.3.2-r3.ebuild94
3 files changed, 20 insertions, 111 deletions
diff --git a/sci-chemistry/aria/ChangeLog b/sci-chemistry/aria/ChangeLog
index 69e256d1ac41..8de920044ccc 100644
--- a/sci-chemistry/aria/ChangeLog
+++ b/sci-chemistry/aria/ChangeLog
@@ -1,6 +1,9 @@
# ChangeLog for sci-chemistry/aria
# Copyright 1999-2014 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/aria/ChangeLog,v 1.23 2014/01/06 15:27:03 jlec Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/aria/ChangeLog,v 1.24 2014/04/26 15:39:43 jlec Exp $
+
+ 26 Apr 2014; Justin Lecher <jlec@gentoo.org> -aria-2.3.2-r3.ebuild:
+ Drop old, #508740
06 Jan 2014; Justin Lecher <jlec@gentoo.org> aria-2.3.2-r3.ebuild:
Punt base.eclass
diff --git a/sci-chemistry/aria/Manifest b/sci-chemistry/aria/Manifest
index cb1413fcb484..1f098a16719c 100644
--- a/sci-chemistry/aria/Manifest
+++ b/sci-chemistry/aria/Manifest
@@ -4,26 +4,26 @@ Hash: SHA512
AUX aria-2.3.2-python.patch 963 SHA256 87f5f27484eddb6ce47fab2a2df6da15fa37cdef24c39e3da7b93555a22e512d SHA512 0422f5f5f70afbe2130aabd5466521063f1e2d8598e4a81ab7be98e331988b9c7fde1155ceb97a773f17df1d8207a3b60d6c9969cd3eea6d33ec7ce35b9b5d28 WHIRLPOOL 119101d2329ec3d8ab6e58992ab8bccc99d04a1a857c65c95c5a468b31ed8061ba51b33056e18d59e54b98546f186ee83f99b6adf20c43b33a998ab5e2ec230e
AUX aria-2.3.2-through-space-2.patch 6049 SHA256 585c963b5b918865175208c44ca256b23062423c9a8111506111fd04e6ac405e SHA512 18e57343aa7d609c11edfc5bbf9aa831c190729ee0dea8f3c1d8103f46c5d1a225a5acda50a09ff26587e119f4a9a0e35af5388d4a325dace7925352f829714d WHIRLPOOL 058c58f4a3319c20410be74541b991280f2b61436a55ff715db24e1351ddb33d4c95977441df27c53929d6d4474923e751e998f07e5399a1b92ec065831e2610
AUX aria-2.3.2-through-space.patch 5040 SHA256 99c547ad5fb85401c39187b9a708fc7332c36be6e467bd834cb551a723fd84fb SHA512 1827cf859af84ced8e0f368370d0f3814de5bb74f7d6e832e4a904dce15d62e1dc660d6c1bda9c148d554ba883ec35bfc3fb6c165c8954b759f91a9c9e102976 WHIRLPOOL 1298a5152a6676b2f6f481c72a82e4af802b4b5c4327d96346e1d184e288dfb2eeaf8b097f5bf6dccf079b8b74ba88212b795ca28c9a42c22302eb7dfb89ed7b
-DIST aria2.3.2.tar.gz 1836270 SHA256 30727ea8bdc2e3b44e5970545008fcfa07fa59aa28b76824956a2aa71daa9615 SHA512 009a1d0079f5cc162dc732749ddd2b33297268f0d988b2f37bda4ed50c7764ceef7ae5b56b322c7ac79427a4a2a92d1239199891445cb5e2b3d0908ed670e2aa WHIRLPOOL f18af5b751e79c92e04f4dc12b6b806a1c505b269559a2342bdd6280b790f9f0df9bb4afe366af03beaf09af0128c6b68c39bc66603d51ad24914c78b2579cf3
DIST aria2.3.2_08.26.2013.tar.gz 1878602 SHA256 b9b892de2070a77812733faf4b6a1dbec4bba6dec80e5630088cab8b11cbfaf0 SHA512 a6d8c45218f5d494174587a5f8f1feec940ac8cc4cd7b707dac65b2378219ecf27967e70807e6cb7ae22a7d4aec7239af763f077ad7183c078b1991cac71bc3e WHIRLPOOL 59c0b79fab40201d903c484bf63e8339c235207306efc848965d260c02b00c9a408297df0f211cf45f30d13ec35175bf7d566bb5c6d59b944eb22d9aacf0384d
-EBUILD aria-2.3.2-r3.ebuild 2126 SHA256 a5489f9fd173f76843973b1ecc246ca2162ec60423d0912e157f5a4ca69fdfe4 SHA512 bb100a242f776caeef489802c7ead2ca743776007b2104748b37ca87fc3a1935fc37ce7a776e6ee53fffd473949883fbbde03a8c75f8941404b34a9528d1ae6e WHIRLPOOL 87e4372d0ec842baadd1bc9e75ffcc46d8e3505f18b014bbf066238de80f0574248fc99b81316785088281041d8c77664f0b2a50a423991c8d2bfe6df44c71bb
EBUILD aria-2.3.2_p20130826.ebuild 2040 SHA256 488ec2ae031402c05c5d667aaf90d58bda6a4c897c344d0978fe1a12d1db8368 SHA512 d91477ae046dee94abf33874e23c2de236ff70e05f5346ff8665d3e39b441febc9fefa4407be9b14a2a2aa4669e219bd64dfb326d604ca608845d25b756844c9 WHIRLPOOL c0b5ad33517aa0a18e83529b2f457bc5219ef72ae557433dd00ae5e262175ce767b67ec599b0dd42b12f408490c85a5e409dec0405889b6ebbab1a2ee04557ef
-MISC ChangeLog 3321 SHA256 4c9a409a1a58a65a2710278d94163be17cc696166ec41f8d492f913fac9aa86c SHA512 a1f62cb96babc15e22537c11cba28ba240b8f9f9f4d139a5ddf25b99c49c230c4a4bd0038d7e99d27a3eb2234c02d0b7bd7ca9fdae0fa7c4f3e58655701fd065 WHIRLPOOL 0b66f8e21fdbf9fab8e9571826df523e6739f3ead61070e4b6684c9b3b508232bdce28c58b8b4e7ab57a7ea03132053211dca4c03152f0a097f2dca6ae5ee6da
+MISC ChangeLog 3412 SHA256 df9c4a3b8ababb51c32841ee91c17deebdec1acd8ae94fe682a498ed39afc151 SHA512 8e5380e88e5fa857485b4c96006720ac38fca67c8a0f16fb1b18b2396c54dfb972f32632bc88391e07a92e1295ce158bbeb0de2dc9b9ace091d2b18e2f321209 WHIRLPOOL ecc36566c2d9177ae76adc807fe5748b919411952c629cbdbbcfd55bb9495d29d45d16add6b5b6bdaddb4f5749e8b58b7f7324eb68aa77aaf27650188046262c
MISC metadata.xml 234 SHA256 8297e76ecd2cb828f604e9f138b263179eb84beb640215a0f60d7613eb46bb7f SHA512 0e94c0e6570a9267a39968d81c3b80680ccbc6eebb62199e4830b021a114c94a0de17ef2103cef62b7e27da1f51f225a30abb802aff82140ae6dc43366113d31 WHIRLPOOL fa6d4d90b092953b88ed3ad03e1e8c189296d268b39d13a4b4dcb78f0c4456341e3f1b44eea0860054fee43079179cb7cf7a912acf1fbe693ecdca6d9a65f081
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diff --git a/sci-chemistry/aria/aria-2.3.2-r3.ebuild b/sci-chemistry/aria/aria-2.3.2-r3.ebuild
deleted file mode 100644
index c7abe0539f92..000000000000
--- a/sci-chemistry/aria/aria-2.3.2-r3.ebuild
+++ /dev/null
@@ -1,94 +0,0 @@
-# Copyright 1999-2014 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/aria/aria-2.3.2-r3.ebuild,v 1.4 2014/01/06 15:27:03 jlec Exp $
-
-EAPI=3
-
-PYTHON_DEPEND="2"
-PYTHON_USE_WITH="tk"
-
-inherit eutils python versionator
-
-MY_P="${PN}$(get_version_component_range 1-2 ${PV})"
-
-DESCRIPTION="Automated NOE assignment and NMR structure calculation"
-HOMEPAGE="http://aria.pasteur.fr/"
-SRC_URI="http://aria.pasteur.fr/archives/${MY_P}.2.tar.gz"
-
-SLOT="0"
-LICENSE="cns"
-KEYWORDS="amd64 x86 ~amd64-linux ~x86-linux"
-IUSE="examples"
-
-RDEPEND="
- sci-chemistry/clashlist
- sci-chemistry/procheck
- sci-libs/clashscore-db
- dev-python/numpy
- dev-python/matplotlib[tk]
- >=sci-chemistry/cns-1.2.1-r7[aria,openmp]
- >=dev-lang/tk-8.3
- >=sci-chemistry/ccpn-2.0.5
- >=dev-tcltk/tix-8.1.4"
-DEPEND="${RDEPEND}"
-
-RESTRICT="fetch"
-
-S="${WORKDIR}/${MY_P}"
-
-pkg_nofetch(){
- einfo "Go to ${HOMEPAGE}, download ${A}"
- einfo "and place it in ${DISTDIR}"
-}
-
-src_prepare() {
- epatch \
- "${FILESDIR}"/${P}-python.patch \
- "${FILESDIR}"/${P}-through-space-2.patch
-}
-
-src_test(){
- export CCPNMR_TOP_DIR="${EPREFIX}"/$(python_get_sitedir)
- export PYTHONPATH=.:${CCPNMR_TOP_DIR}/ccpn/python
- $(PYTHON) check.py || die
-}
-
-src_install(){
- insinto "$(python_get_sitedir)/${PN}"
- doins -r src aria2.py || die "failed to install ${PN}"
- insinto "$(python_get_sitedir)/${PN}"/cns
- doins -r cns/{protocols,toppar,src/helplib} || die "failed to install cns part"
-
- if use examples; then
- insinto /usr/share/${P}/
- doins -r examples || die
- fi
-
- # ENV
- cat >> "${T}"/20aria <<- EOF
- ARIA2="${EPREFIX}/$(python_get_sitedir)/${PN}"
- EOF
-
- doenvd "${T}"/20aria
-
- # Launch Wrapper
- cat >> "${T}"/aria <<- EOF
- #!/bin/sh
- export CCPNMR_TOP_DIR="${EPREFIX}/$(python_get_sitedir)"
- export PYTHONPATH="${EPREFIX}/$(python_get_sitedir)/ccpn/python"
- exec "$(PYTHON)" -O "\${ARIA2}"/aria2.py \$@
- EOF
-
- dobin "${T}"/aria || die "failed to install wrapper"
- dosym aria /usr/bin/aria2
-
- dodoc README || die
-}
-
-pkg_postinst() {
- python_mod_optimize ${PN}
-}
-
-pkg_postrm() {
- python_mod_cleanup ${PN}
-}