sci-chemistry/relax: Version Bump

Package-Manager: portage-2.2.8/cvs/Linux x86_64
Manifest-Sign-Key: 0xB9D4F231BD1558AB!

3 files changed, 92 insertions, 15 deletions

diff --git a/sci-chemistry/relax/ChangeLog b/sci-chemistry/relax/ChangeLog
index b9ed3237fbc6..900ee8839182 100644
--- a/sci-chemistry/relax/ChangeLog
+++ b/sci-chemistry/relax/ChangeLog
@@ -1,6 +1,11 @@
 # ChangeLog for sci-chemistry/relax
 # Copyright 1999-2014 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/relax/ChangeLog,v 1.16 2014/01/14 11:58:39 jlec Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/relax/ChangeLog,v 1.17 2014/01/17 07:07:54 jlec Exp $
+
+*relax-3.1.3 (17 Jan 2014)
+
+  17 Jan 2014; Justin Lecher <jlec@gentoo.org> +relax-3.1.3.ebuild:
+  Version Bump
 
 *relax-3.1.2 (14 Jan 2014)
 
diff --git a/sci-chemistry/relax/Manifest b/sci-chemistry/relax/Manifest
index 94818e554ce4..541af6f5ed74 100644
--- a/sci-chemistry/relax/Manifest
+++ b/sci-chemistry/relax/Manifest
@@ -16,6 +16,7 @@ DIST relax-3.0.2.src.tar.bz2 60546216 SHA256 647fa4b05ae4e7f5072ee1c3c88af5b6eaf
 DIST relax-3.1.0.src.tar.bz2 66036287 SHA256 900454b3b84749c35c824065bd61425e8cf53a4b2cb2d3cfa82fd54e3ffc091a SHA512 95536807247f0bc7721c5af40275445e20cf554bf8318b7e6f4bda6d0e15d96681e68b03d14f63438203814eba31d8b4a927e098194ca2572364a84cd6249a75 WHIRLPOOL 1bb244eedf76743e7914c1620fa056dadb983da93c3118427447cef9f251405bc5b791e5b293f59921f1b8e6adcd1001a6a4bee7ddc61c8c0e844430d6a76dca
 DIST relax-3.1.1.src.tar.bz2 70817972 SHA256 849ee4629021759650ba4163f3cc423efdc510a2ac88fa672f693bc21d4c9f82 SHA512 147f23d46f56945b2e195cb0ed2c466b95c5ccd33a346e012a45c70773751bbded764401f81d2424008b5e64984b57b3e146eeae70aed121d3727dc245689316 WHIRLPOOL f16b61598bc74a43db929c2d634470e7fd5a30b880643e0e4da87894eefadefa549b022fb130e00a910ece1f020b64b95c7a144d642ba59c58cce9c6a2f85886
 DIST relax-3.1.2.src.tar.bz2 70814671 SHA256 ec707728af085d079ca57b97bd912fbb8e4896786cd84284f34579ed5e70f72f SHA512 1285f6f5ffdf18dad6fd6cd84ace49e6f8c68f5099297fa78d47845c37ecd3efcab88e0c866ecd9618cd25e51037c40fd6f4ad6717f9a197fa7e0e831c152c86 WHIRLPOOL 54102fe54011b6447885fa7ca951ee46517d0012233c38f1792ba5b05b9a7ae2450bee017d4af3149ba7be058e2005650bee2666ef17df6390eede8cb22515a6
+DIST relax-3.1.3.src.tar.bz2 70753182 SHA256 9c01e5d3277fcc7cd0574badcbce22f51d9520baf6de6812334e929e5c9189dd SHA512 6fae858b8635431e70d929988a4ec3a00942a6ee8f789d01077d5a850e9b6911781c7ce2e5fc8ed59281bacd7d43cd1060097ec2460b3da8300fb39309ea77da WHIRLPOOL 8a5dd951993f593379d577e8d2b69a6fd5298726de21da937f2d6ef47033031f82317f63c170686c58fb82d479b573f7d276bfa8473397f4b1034366534f630f
 EBUILD relax-2.1.0.ebuild 1128 SHA256 2d49d317cc424da9f9f2bf86ec802dae614952d506e385a60fa95e262b0c0da3 SHA512 fa76e538545bb5a2d520d3b063ba255f2d4c0279332631f061444a697528f78c6709f3d91a946289bf80828059ff7423b0d3d5374117bf89625f360212540614 WHIRLPOOL 4e0686ab5f70ddd7243c53437978b617ee2a9be55da1eb78022863babeafffae80536048471526e6076553761ea968129e7100c960d6fc7f970b281911d4ba09
 EBUILD relax-2.2.1.ebuild 1337 SHA256 4c65b74e17d1928bfc0f42230e1ccbc6abd5963901a751a7782f3c19bf25008c SHA512 70c78139ba9a9a08404673fc970082f9e3c868b2651b80d9f7cac4c5680bec846c69d3c65e68240139dfe37957607845b0ac66f595151ee7051b745d500d095e WHIRLPOOL 219ca572d15297a779da98b2a9f7a12edd80bec89710be07d0d2b02716534c831893a0bc14a0a9f177e6cebc0283c4d25872c4265a7f6f20610c0b17feafd236
 EBUILD relax-2.2.5.ebuild 1521 SHA256 f9192d970b2e70dcebdfc6ebd4658459cf5ac88a1b74886cf456108633ccf2c3 SHA512 7a4f13a4be29ef48082e82e6ec7bc6f6b3e1da72ed32e914b9f202c83f61868d850f3c4f2410407ad4c1be5ce5939fb16330d403bcdbdea12fc69e0070a15007 WHIRLPOOL ba6768c596b799456d18f85450520b7de81b5688df9ec3762023b54bf82f3398ed9eea862d242a064ffd3f71f8f73315b15d8734ace7a0196e4fc0b82be8ad99
@@ -24,23 +25,24 @@ EBUILD relax-3.0.2-r2.ebuild 1681 SHA256 15d6aa55fc61b7541b5855c96be559b381b3263
 EBUILD relax-3.1.0-r2.ebuild 1942 SHA256 3395cad786225adb74b79d6cddec1979e419ff5f44236d010057b053d844880d SHA512 b0f64d0975e4d2309ddc566d2605a7c44f9bd9b383dc945034d6a96f642f50c8120c0ebc7f259e3234c25b2af8e1115fb7ad7396c40d89af46daf1fab7bacc56 WHIRLPOOL 17a86c67cd6bc90035ee5c7351d3dc9cd35091a5d6910fd323754eec90488c3ffa7c8b47799f17c5c8f0b61e9dfc44311d7d5e042f5ef3351be310f4450e1c39
 EBUILD relax-3.1.1-r1.ebuild 1887 SHA256 94c9faa927538de9d6da536370eefe6aa7600588155d90ed69943cb21ec9c39b SHA512 0d6340bffe71c28f1a809b8a782147e64d5aee96ae7b11d30664d735388f5ecae855eeadfa63e1abe10e46b6b56183934b55b5b82eac32a592752fe467f8becb WHIRLPOOL ffa3d0110f1fc3450ae2aa5925613ab3bc011209a54e2f883289e5c68ad670bde499844cbcf215ab4d761e73beffcd582361ac3ccf2d36c9972b0b4f816a542c
 EBUILD relax-3.1.2.ebuild 1606 SHA256 30db2f2f28f07ab2ff0c17d92709db0724251f91ea889c02ccb0cbd455db9e99 SHA512 6e361f1f098c13e6669a224319896b671479f9ff7ca8962a61367ba32d81eb9623f32ccf709004b2e7d5caeec1e069544cb170b65a1b988a5b95eee45482ab41 WHIRLPOOL 9314fa78bc2bbaeb81665a9830ab02ff2f8353acd3cc4b2e9303db1d2f4ede147ad4ca90babc652329130ea47114cb0e17586fdb09df917909df284262288643
+EBUILD relax-3.1.3.ebuild 1606 SHA256 d726480185f5659a60c43fe0d648ec4d494c1a000ed082446f1945f3033723e3 SHA512 a3e847791fdeb1683f10f971e3367b676f315c98df5d0b032a1473800e232becd89483f6034c76e48b289a37bf3ae72773862ebeaa00afaf2b18ef410ddf89a8 WHIRLPOOL e6388abcd1568e94bb058f808bae5195a082edb5646e52f79e71a43e63318718297d80b76421280a997fbb2c38da88f7ffeab95362568d45b8a12515f62b08aa
 EBUILD relax-9999.ebuild 1621 SHA256 0f7a800c351dcc86fa2b43b10bc0cc1e0126a5cdf5d3489928070a475ec2ad2e SHA512 820143e457b8282ad7b33ac4013889c016b6763a834718f0c33a52b9da3f367776200206fc95aab4220866819898ad72e1fd48e8cb6f9f3272c278e44eb947fb WHIRLPOOL f4ced5b9c344f7a1abdffff6f8d8163701399ce45625cae26a328a8d80705ecfe6833bf8ec398decb5c4993080a212fc9b41653bca88f0c980e28d6b873ee4ab
-MISC ChangeLog 2735 SHA256 ec1fa90a76cbc448209dcc1b38e05a9d5c154674bf2660b6ae23190156f9776f SHA512 afc6f810ab8ba9072a9a4d56e7d127a7c94da5b3472fe201ac6d2582344263a69683df2a7d2c038ba0930943ab2592392d191f94b67944c2b401f135a64348bf WHIRLPOOL d358c4896b23c3d13c90ab4c0419f4dc15266fc609d6060348dc1ae8659291c859fa776e12af3cb5895bab119846437ed2916d5c87ecb62981842938dede54fb
+MISC ChangeLog 2847 SHA256 00e73af126dc786c74fbfc25d14ff6f983ae03026b3cec5707b4a2fb077a284e SHA512 1f362cb01ac44bcbb4e9bb8bedba5ae45b8dabb2e2183676afedf604c68f0dc70e84062d6e7f4f947138077f94358c458b091038c5eb162437672843ed1f8e81 WHIRLPOOL 4953e9ab9ae32d796a6ba683cc1b1f6268fdeb2023bdea187e042304d095810dd91d8fb1bf2a18a71f6ace97536a823eddf5da74c442193423e7cb2bb9ec7a1d
 MISC metadata.xml 1315 SHA256 58aef1b2b940b7211a85032dfc7212025aca6a3cd313b1a6e203854bbd3dd03e SHA512 dcb1d935782546693b79aa74dc37d55701ff4cb1756860a7f0d9919534ad2ae6f1dcad20cace867b10297c577cb6444dd5e212b13f57c3d81b30b382d8458c04 WHIRLPOOL e2de7c85fb3494a98c2ee1b08dd06d28676f43f64367ad29a8723f712e12e9052daa82794bb6626506de568701b1ea09efe059a8d3a13f6aee5fd607a913e441
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diff --git a/sci-chemistry/relax/relax-3.1.3.ebuild b/sci-chemistry/relax/relax-3.1.3.ebuild
new file mode 100644
index 000000000000..60b39cd7a1ec
--- /dev/null
+++ b/sci-chemistry/relax/relax-3.1.3.ebuild
@@ -0,0 +1,70 @@
+# Copyright 1999-2014 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/relax/relax-3.1.3.ebuild,v 1.1 2014/01/17 07:07:54 jlec Exp $
+
+EAPI=5
+
+PYTHON_COMPAT=( python2_7 )
+
+WX_GTK_VER="2.9"
+
+inherit eutils multiprocessing python-single-r1 scons-utils toolchain-funcs wxwidgets virtualx
+
+DESCRIPTION="Molecular dynamics by NMR data analysis"
+HOMEPAGE="http://www.nmr-relax.com/"
+SRC_URI="http://download.gna.org/relax/${P}.src.tar.bz2"
+
+SLOT="0"
+LICENSE="GPL-2"
+KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux"
+IUSE=""
+
+REQUIRED_USE="${PYTHON_REQUIRED_USE}"
+
+RDEPEND="
+	${PYTHON_DEPS}
+	dev-python/numpy[${PYTHON_USEDEP}]
+	dev-python/wxpython:${WX_GTK_VER}[${PYTHON_USEDEP}]
+	sci-chemistry/molmol
+	sci-chemistry/pymol[${PYTHON_USEDEP}]
+	sci-chemistry/vmd
+	>=sci-libs/bmrblib-1.0.1_pre198[${PYTHON_USEDEP}]
+	>=sci-libs/minfx-1.0.4_pre98[${PYTHON_USEDEP}]
+	sci-libs/scipy[${PYTHON_USEDEP}]
+	sci-visualization/grace
+	sci-visualization/opendx
+	x11-libs/wxGTK:${WX_GTK_VER}[X]"
+DEPEND="${RDEPEND}
+	media-gfx/pngcrush"
+
+pkg_setup() {
+	python-single-r1_pkg_setup
+}
+
+src_prepare() {
+	local png
+	rm -rf minfx bmrblib || die
+	epatch \
+		"${FILESDIR}"/${PN}-3.0.1-gentoo.patch
+	tc-export CC
+}
+
+src_compile() {
+	escons
+}
+
+src_test() {
+	VIRTUALX_COMMAND="${EPYTHON} ./${PN}.py -x"
+	virtualmake
+}
+
+src_install() {
+	dodoc README docs/{CHANGES,COMMITTERS,JOBS,relax.pdf,prompt_screenshot.txt}
+
+	python_moduleinto ${PN}
+	python_domodule *
+
+	rm ${PN} README || die
+
+	make_wrapper ${PN}-nmr "${EPYTHON} $(python_get_sitedir)/${PN}/${PN}.py $@"
+}