sci-libs/netcdf: Version 3* dropped, due to unfixed bfr overflow, #424976

Package-Manager: portage-2.2.0_alpha116/cvs/Linux x86_64

3 files changed, 21 insertions, 116 deletions

diff --git a/sci-libs/netcdf/ChangeLog b/sci-libs/netcdf/ChangeLog
index f9d303ec0bc3..a98049ac0fe0 100644
--- a/sci-libs/netcdf/ChangeLog
+++ b/sci-libs/netcdf/ChangeLog
@@ -1,6 +1,9 @@
 # ChangeLog for sci-libs/netcdf
 # Copyright 1999-2012 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-libs/netcdf/ChangeLog,v 1.98 2012/06/27 10:05:28 jlec Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-libs/netcdf/ChangeLog,v 1.99 2012/07/06 07:50:51 jlec Exp $
+
+  06 Jul 2012; Justin Lecher <jlec@gentoo.org> -netcdf-3.6.3.ebuild:
+  Version 3* dropped, due to unfixed bfr overflow, #424976
 
   27 Jun 2012; Justin Lecher <jlec@gentoo.org> netcdf-3.6.3.ebuild,
   netcdf-4.1.1-r4.ebuild, metadata.xml:
diff --git a/sci-libs/netcdf/Manifest b/sci-libs/netcdf/Manifest
index bbada68eb6c0..897962f7fdb1 100644
--- a/sci-libs/netcdf/Manifest
+++ b/sci-libs/netcdf/Manifest
@@ -1,27 +1,25 @@
 -----BEGIN PGP SIGNED MESSAGE-----
 Hash: SHA512
 
-AUX netcdf-3.6.3-as-needed.patch 1794 RMD160 4b81004e09b1d620ad6fe3450ed3906f214cfa32 SHA1 f3c3809227674cdcdd0ec0ea3236c68cda8e9bf7 SHA256 4bd124aac6f9b3aeedf91b89e713cb1dd035423361ef609e784b17b4b08be645
-AUX netcdf-3.6.3-parallel.patch 518 RMD160 840c57498d0dd75f33f1653be0a811248b2c1d18 SHA1 f8a14e3d069c9983bbb9fd3b3ebdd9f480617e2a SHA256 ff26354df395398b70ebb28c26a0478e6a0bff18fdf6b46cece9a619d3df1b97
-AUX netcdf-4.1.1-fortran.patch 533 RMD160 5237f450bddab15286f4ec4a9abb95953dce437a SHA1 9f5450708b9d7a165d92c3a3545303f2ab797253 SHA256 0b7ed3bc01dfe23fe8eeace124efb3d49e793361a2626e3aeef5bf62c842e5df
-AUX netcdf-4.1.1-implicits.patch 2588 RMD160 1e27a022bb0fb7910bb9940ff2b9410dc0b8550b SHA1 205249ed81d4a09d9ea5bd9936b72c422badece7 SHA256 ffd6d894ea0dc29c56100d9c94fb22e51cb5fe775a41d02aa6367ccf2e091d95
-AUX netcdf-4.1.1-mpi-fix.patch 672 RMD160 3ce460d05e7b665e5cd2b2af5d01a39621da45e6 SHA1 c5ee6d6d36af47e156e5abf3e85fe93319c3008a SHA256 8b891b1ce49442158acb77b48fdaeff203a803ec644dd16fa4e85c14b6debc7c
-AUX netcdf-4.1.1-parallel-build.patch 1311 RMD160 ea8237befdf90fb373a561531decee57c37d0a97 SHA1 d72b15f18d34a53a918746858d5c403f8b60c072 SHA256 e107feb3ae7df1381575e2ce1eac289871bc168ffb56470624a29959af394364
-DIST netcdf-3.6.3.tar.gz 11572512 RMD160 6917caa05adc2fb9dbf2d43354f6dd00914486a2 SHA1 711e5f2a24e1679b17715398ba58127e50cd7fb3 SHA256 afa1a0fa82b9ea33b035257b6e9662b22e135f98b2fd93d5cf030320dfc3ffa1
-DIST netcdf-4.1.1.tar.gz 11201096 RMD160 89b6e1a2115ef348ac83166aa7a50e045fbd98e2 SHA1 6fece208825b978fc2240732f6f57927d71a0552 SHA256 7933d69d378c57f038375bae4dd78c52442a06e2647fce4b75c13a225e342fb0
-DIST netcdf-4.1.3.tar.gz 11097157 RMD160 ac07f570873bba89a49cb2eb2275a40cbc8e502b SHA1 e600322478276f51612e17cca3cda38489003f81 SHA256 315bc385b0750dd85b9a122194382db52f432dea1390de9f7afa11cf91869213
-DIST netcdf-4.2.tar.gz 4528968 RMD160 2cc9064e96df98e82a328c8984bbb4aaf8e4d698 SHA1 949df89cd05ab8386e5f8080a183dc63c2f2f3bd SHA256 541bcc14f4b524e1cacc9e70fe814768e66b2dac2fd5c082ff39beb91c44a1e4
-EBUILD netcdf-3.6.3.ebuild 2501 RMD160 2a1c8aa269080ee03438fe26bb1e81fee0cd53c1 SHA1 4bfbd50c6bb95d8b13f595e04a602fd2454992e7 SHA256 5778337c633775e3278a174dd7daaf7dda8d364d5a360831781c2d6c77de2a0e
-EBUILD netcdf-4.1.1-r4.ebuild 2322 RMD160 1aac73c861eb158b5b30e2da626399216e8e4e8e SHA1 b3e06527969431641e0e4398b82fd5c1b4b2a6d8 SHA256 eb5e23da1c8651298d963e3fd1078cc79d805ec36d42a2d5694b3f27d2101a63
-EBUILD netcdf-4.1.3.ebuild 2121 RMD160 975497fa91c32ea1b7f42a4d5f1b342217bff479 SHA1 9dbb7e95498d6005683d7008b28a5650fac72c71 SHA256 36b3eac5531dcc804d18335edfb60ca7e26300670b95c137049f63fc75258afd
-EBUILD netcdf-4.2.ebuild 1131 RMD160 f1cf03b667a77bcc6e675229f867b3a73dac17b9 SHA1 406401e900708593f7b5eb649fde8bcb40a28716 SHA256 a194d996cf5bd75b4df83750a7effb419eee15ca62ce26dc02c684e32bceb3be
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+DIST netcdf-4.1.3.tar.gz 11097157 SHA256 315bc385b0750dd85b9a122194382db52f432dea1390de9f7afa11cf91869213 SHA512 e482796b42e3de728dfe7eab542d93548fdc2979a560dd52fd205d2233ff6bc0f0a02af23747c5156d24c32345b9bb32c0286f6d6689e1e20c9c04385cc1eea6 WHIRLPOOL 0ae32c82057d255ee55116e02c1a6467b5fe0ea3c1b7ce768a94a6820aa40ff66fa742926ea45a60f1fb07bf31687029aa2aa3d4dabcad4397540015687d3251
+DIST netcdf-4.2.tar.gz 4528968 SHA256 541bcc14f4b524e1cacc9e70fe814768e66b2dac2fd5c082ff39beb91c44a1e4 SHA512 ba41f35375cef4dd7911cb89a5ae66b4e3cc5f98022516d4072d29d4a3a17c09fcb37466ad6088f63d7cc08678ba0eaac86c59044c8eba3f2127c4deaf53ff11 WHIRLPOOL 4738d9df702427d7092203163d41c9f4a484464c5c92ffd4d260f043eb37948bbf8e2415c56d362d21bc4d20bdea72dee8e29e764b7884c9eabf975ad7653ea9
+EBUILD netcdf-4.1.1-r4.ebuild 2322 SHA256 eb5e23da1c8651298d963e3fd1078cc79d805ec36d42a2d5694b3f27d2101a63 SHA512 ace65e03a2c9d6a784af817bc75c5f5459eda03aaf7056fe387c4e84a959b82e21bb83d74bcf61c281cee42c237e2a1695a3cc53b280058e4df88cca5eb9e88c WHIRLPOOL bb9ece2401ef671f3fe6059df3c6b7e09a477f2b5821a3a0baece368d9fc22a40ed2206f426bb0e0ea51aa8a5028c72fccd94c284fe6638746b716725b43d831
+EBUILD netcdf-4.1.3.ebuild 2121 SHA256 36b3eac5531dcc804d18335edfb60ca7e26300670b95c137049f63fc75258afd SHA512 7eddf9888289b19feb4cb3c8a2f792cc9fb84054d217cb81b8e5f46bcaa20b2ebabec5200971810ade0b5f217db71d3c880a0deadfa748b0cf8bc130f0f80b43 WHIRLPOOL 78a2a9da0b6902f7edb20d6c01e9f524828f96e9a9ef0b042354878e63d514b61f44bae0d33b20d2223e54a82558d3219baf95fd1af340efa1a4fcee3d0cfe8f
+EBUILD netcdf-4.2.ebuild 1131 SHA256 a194d996cf5bd75b4df83750a7effb419eee15ca62ce26dc02c684e32bceb3be SHA512 0e6022871174e54042ae0db25eef2feea81a42a55005fae77566d1b1b39429a6466dc6dcc943b1635155306a1b885fc24158dea98c7bb3583717e7dc9c1017c4 WHIRLPOOL 06c7a2d8bc0471f1c04a3fc85a6f3a5c5695ff9ed640b57f18cc55ed6fb09b41e833317516822c40bd66938b1ef08ef07b57faaa9387934b4dcdc0b2af95d6e0
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diff --git a/sci-libs/netcdf/netcdf-3.6.3.ebuild b/sci-libs/netcdf/netcdf-3.6.3.ebuild
deleted file mode 100644
index 83712231512b..000000000000
--- a/sci-libs/netcdf/netcdf-3.6.3.ebuild
+++ /dev/null
@@ -1,96 +0,0 @@
-# Copyright 1999-2012 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-libs/netcdf/netcdf-3.6.3.ebuild,v 1.19 2012/06/27 10:05:28 jlec Exp $
-
-EAPI=2
-
-inherit eutils fortran-2 toolchain-funcs flag-o-matic autotools
-
-DESCRIPTION="Scientific library and interface for array oriented data access"
-SRC_URI="ftp://ftp.unidata.ucar.edu/pub/netcdf/${P}.tar.gz"
-HOMEPAGE="http://www.unidata.ucar.edu/software/netcdf/"
-
-LICENSE="UCAR-Unidata"
-SLOT="0"
-IUSE="fortran debug doc"
-KEYWORDS="alpha amd64 ia64 ~mips ppc ppc64 sparc x86"
-
-RDEPEND="
-	fortran? ( virtual/fortran )
-	"
-DEPEND="${RDEPEND}
-	>=sys-devel/libtool-2.2
-	doc? ( virtual/latex-base )"
-
-pkg_setup() {
-	use fortran && fortran-2_pkg_setup
-}
-
-src_prepare() {
-	epatch "${FILESDIR}"/${P}-as-needed.patch
-	epatch "${FILESDIR}"/${P}-parallel.patch
-	eautoreconf
-}
-
-src_configure() {
-	use debug || append-cppflags -DNDEBUG
-	local myconf
-	if use fortran; then
-		case "$(tc-getFC)" in
-			*g77)
-				myconf="${myconf} --enable-f77 --disable-f90"
-				myconf="${myconf} F77=g77"
-				;;
-			pgf77)
-				myconf="${myconf} --enable-f77 --disable-f90"
-				myconf="${myconf} F77=pgf77"
-				;;
-			pgf90)
-				myconf="${myconf} --enable-f77 --enable-f90"
-				myconf="${myconf} FC=pgf90 F90=pgf90 F77=pgf90"
-				;;
-			ifc|ifort)
-				myconf="${myconf} --enable-f77 --enable-f90"
-				myconf="${myconf} FC=ifort F90=ifort F77=ifort"
-				;;
-			*)
-				myconf="${myconf} --enable-f77 --enable-f90"
-				myconf="${myconf} FC=gfortran F90=gfortran F77=gfortran"
-				export F90FLAGS="-i4  ${F90FLAGS}"
-				;;
-		esac
-		# fortran 90 uses FCFLAGS
-		export FCFLAGS="${FFLAGS:--O2}"
-	else
-		myconf="${myconf} --disable-f77 --disable-f90"
-	fi
-
-	econf \
-		--enable-shared \
-		--docdir=/usr/share/doc/${PF} \
-		$(use_enable fortran separate-fortran ) \
-		$(use_enable doc docs-install) \
-		${myconf}
-}
-
-src_compile() {
-	# hack to allow parallel build
-	if use doc; then
-		emake pdf || die "emake pdf failed"
-		cd man4
-		emake -j1 || die "emake doc failed"
-		cd ..
-	fi
-	emake || die "emake failed"
-}
-
-src_install() {
-	emake DESTDIR="${D}" install || die "emake install failed"
-	dodoc README RELEASE_NOTES VERSION || die "dodoc failed"
-	# keep only pdf,txt and html docs, info were already installed
-	if use doc; then
-		find "${D}usr/share/doc/${PF}" -name \*.ps -exec rm -f {} \;
-		find "${D}usr/share/doc/${PF}" -name \*.info -exec rm -f {} \;
-		find "${D}usr/share/doc/${PF}" -name \*.txt -exec ecompress {} \;
-	fi
-}