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-rw-r--r--sci-biology/bioperl-db/ChangeLog11
-rw-r--r--sci-biology/bioperl-db/bioperl-db-9999-r1.ebuild (renamed from sci-biology/bioperl-db/bioperl-db-9999.ebuild)8
-rw-r--r--sci-biology/bioperl-network/ChangeLog11
-rw-r--r--sci-biology/bioperl-network/bioperl-network-9999-r1.ebuild (renamed from sci-biology/bioperl-network/bioperl-network-9999.ebuild)8
-rw-r--r--sci-biology/bioperl-run/ChangeLog11
-rw-r--r--sci-biology/bioperl-run/bioperl-run-9999-r1.ebuild (renamed from sci-biology/bioperl-run/bioperl-run-9999.ebuild)8
6 files changed, 39 insertions, 18 deletions
diff --git a/sci-biology/bioperl-db/ChangeLog b/sci-biology/bioperl-db/ChangeLog
index e88a7b72e529..3396f4911eb6 100644
--- a/sci-biology/bioperl-db/ChangeLog
+++ b/sci-biology/bioperl-db/ChangeLog
@@ -1,6 +1,13 @@
# ChangeLog for sci-biology/bioperl-db
-# Copyright 1999-2009 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/bioperl-db/ChangeLog,v 1.4 2009/06/11 19:32:42 maekke Exp $
+# Copyright 1999-2010 Gentoo Foundation; Distributed under the GPL v2
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/bioperl-db/ChangeLog,v 1.5 2010/10/17 22:13:33 weaver Exp $
+
+*bioperl-db-9999-r1 (17 Oct 2010)
+
+ 17 Oct 2010; Andrey Kislyuk <weaver@gentoo.org> -bioperl-db-9999.ebuild,
+ +bioperl-db-9999-r1.ebuild:
+ Update live ebuild for upstream svm->github migration, bug 338362. Thanks
+ to Joel Berendzen
11 Jun 2009; Markus Meier <maekke@gentoo.org> bioperl-db-1.6.0.ebuild:
amd64 stable, bug #270580
diff --git a/sci-biology/bioperl-db/bioperl-db-9999.ebuild b/sci-biology/bioperl-db/bioperl-db-9999-r1.ebuild
index ed30130baf37..6ca45452a7d0 100644
--- a/sci-biology/bioperl-db/bioperl-db-9999.ebuild
+++ b/sci-biology/bioperl-db/bioperl-db-9999-r1.ebuild
@@ -1,15 +1,15 @@
-# Copyright 1999-2009 Gentoo Foundation
+# Copyright 1999-2010 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/bioperl-db/bioperl-db-9999.ebuild,v 1.2 2009/05/13 15:51:12 weaver Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/bioperl-db/bioperl-db-9999-r1.ebuild,v 1.1 2010/10/17 22:13:33 weaver Exp $
EAPI="2"
-inherit perl-module subversion
+inherit perl-module git
DESCRIPTION="Perl tools for bioinformatics - Perl API that accesses the BioSQL schema"
HOMEPAGE="http://www.bioperl.org/"
SRC_URI=""
-ESVN_REPO_URI="svn://code.open-bio.org/bioperl/${PN}/trunk"
+EGIT_REPO_URI="git://github.com/bioperl/${PN}.git"
LICENSE="Artistic GPL-2"
SLOT="0"
diff --git a/sci-biology/bioperl-network/ChangeLog b/sci-biology/bioperl-network/ChangeLog
index 2551334c2be5..15318032d607 100644
--- a/sci-biology/bioperl-network/ChangeLog
+++ b/sci-biology/bioperl-network/ChangeLog
@@ -1,6 +1,13 @@
# ChangeLog for sci-biology/bioperl-network
-# Copyright 1999-2009 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/bioperl-network/ChangeLog,v 1.4 2009/06/11 19:34:12 maekke Exp $
+# Copyright 1999-2010 Gentoo Foundation; Distributed under the GPL v2
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/bioperl-network/ChangeLog,v 1.5 2010/10/17 22:15:30 weaver Exp $
+
+*bioperl-network-9999-r1 (17 Oct 2010)
+
+ 17 Oct 2010; Andrey Kislyuk <weaver@gentoo.org>
+ -bioperl-network-9999.ebuild, +bioperl-network-9999-r1.ebuild:
+ Update live ebuild for upstream svm->github migration, bug 338362. Thanks
+ to Joel Berendzen
11 Jun 2009; Markus Meier <maekke@gentoo.org>
bioperl-network-1.6.0.ebuild:
diff --git a/sci-biology/bioperl-network/bioperl-network-9999.ebuild b/sci-biology/bioperl-network/bioperl-network-9999-r1.ebuild
index 4d93e824afb9..6265bcf5acc2 100644
--- a/sci-biology/bioperl-network/bioperl-network-9999.ebuild
+++ b/sci-biology/bioperl-network/bioperl-network-9999-r1.ebuild
@@ -1,15 +1,15 @@
-# Copyright 1999-2009 Gentoo Foundation
+# Copyright 1999-2010 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/bioperl-network/bioperl-network-9999.ebuild,v 1.2 2009/05/13 15:50:27 weaver Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/bioperl-network/bioperl-network-9999-r1.ebuild,v 1.1 2010/10/17 22:15:30 weaver Exp $
EAPI="2"
-inherit perl-module subversion
+inherit perl-module git
DESCRIPTION="Perl tools for bioinformatics - Analysis of protein-protein interaction networks"
HOMEPAGE="http://www.bioperl.org/"
SRC_URI=""
-ESVN_REPO_URI="svn://code.open-bio.org/bioperl/${PN}/trunk"
+EGIT_REPO_URI="git://github.com/bioperl/${PN}.git"
LICENSE="Artistic GPL-2"
SLOT="0"
diff --git a/sci-biology/bioperl-run/ChangeLog b/sci-biology/bioperl-run/ChangeLog
index 7c4702891a0f..0b7ebd7c5de7 100644
--- a/sci-biology/bioperl-run/ChangeLog
+++ b/sci-biology/bioperl-run/ChangeLog
@@ -1,6 +1,13 @@
# ChangeLog for sci-biology/bioperl-run
-# Copyright 1999-2009 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/bioperl-run/ChangeLog,v 1.19 2009/06/11 19:33:30 maekke Exp $
+# Copyright 1999-2010 Gentoo Foundation; Distributed under the GPL v2
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/bioperl-run/ChangeLog,v 1.20 2010/10/17 22:18:33 weaver Exp $
+
+*bioperl-run-9999-r1 (17 Oct 2010)
+
+ 17 Oct 2010; Andrey Kislyuk <weaver@gentoo.org> -bioperl-run-9999.ebuild,
+ +bioperl-run-9999-r1.ebuild:
+ Update live ebuild for upstream svm->github migration, bug 338362. Thanks
+ to Joel Berendzen
11 Jun 2009; Markus Meier <maekke@gentoo.org> bioperl-run-1.6.1.ebuild:
amd64 stable, bug #270582
diff --git a/sci-biology/bioperl-run/bioperl-run-9999.ebuild b/sci-biology/bioperl-run/bioperl-run-9999-r1.ebuild
index a2b3571f1195..2a306df4804b 100644
--- a/sci-biology/bioperl-run/bioperl-run-9999.ebuild
+++ b/sci-biology/bioperl-run/bioperl-run-9999-r1.ebuild
@@ -1,15 +1,15 @@
-# Copyright 1999-2009 Gentoo Foundation
+# Copyright 1999-2010 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/bioperl-run/bioperl-run-9999.ebuild,v 1.4 2009/06/01 16:22:04 weaver Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/bioperl-run/bioperl-run-9999-r1.ebuild,v 1.1 2010/10/17 22:18:33 weaver Exp $
EAPI="2"
-inherit perl-module subversion
+inherit perl-module git
DESCRIPTION="Perl tools for bioinformatics - Wrapper modules around key bioinformatics applications"
HOMEPAGE="http://www.bioperl.org/"
SRC_URI=""
-ESVN_REPO_URI="svn://code.open-bio.org/bioperl/${PN}/trunk"
+EGIT_REPO_URI="git://github.com/bioperl/${PN}.git"
LICENSE="Artistic GPL-2"
SLOT="0"