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authorJustin Lecher <jlec@gentoo.org>2015-10-01 09:44:53 +0200
committerJustin Lecher <jlec@gentoo.org>2015-10-01 12:12:31 +0200
commit6dcb50e5858f5a26fefcd998abd3d5caa9940ea5 (patch)
tree10d90e40c9e21e943b24b83e67c3ef9a365bb280 /sci-biology
parentapp-misc/c_rehash: drop old (diff)
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sci-biology/rebase: Version Bump
Package-Manager: portage-2.2.22 Signed-off-by: Justin Lecher <jlec@gentoo.org>
Diffstat (limited to 'sci-biology')
-rw-r--r--sci-biology/rebase/Manifest1
-rw-r--r--sci-biology/rebase/rebase-1510.ebuild46
2 files changed, 47 insertions, 0 deletions
diff --git a/sci-biology/rebase/Manifest b/sci-biology/rebase/Manifest
index f322a7fe28f9..e385613ad060 100644
--- a/sci-biology/rebase/Manifest
+++ b/sci-biology/rebase/Manifest
@@ -1,2 +1,3 @@
DIST rebase-1508.tar.xz 69944352 SHA256 579ef686b0efea32d88633f85411da9c1396572eec0d20bd163ca7bf615c7b04 SHA512 d5dc9eb704ce28ab7951ab2a8781de76dcbd7a4b6d6c6634abcd36766c8dce77b6d8a712789fe6293a6ddc66cd9103e17121b0ff52f0d3fbabfc5bf47c2f2100 WHIRLPOOL f082a3096cef636a61a176d3d3fe5b993bc83e3b332d134ebc20201d21f2f66e3400ffc5d561018c63fb3201c5fc0862126a32c17c5c96f118859b62a618d341
DIST rebase-1509.tar.xz 81228428 SHA256 ffad3955197850b4383bf7b96278af357cb99bec129e7a00d7d601e76868870b SHA512 2d9f90c24ab977b29a1e1e790966f48274691375ab5f4b7a4f37c1e62dc8bd4d0b4409475e9b97bb63e3f481066f8407efc4d1314ee24c836f60b53d736d77ed WHIRLPOOL ab86576f037d142a285f3830f88e5b750a52f79c90f35bd117695a5de125c753747329522b1f514c503ff7e28e8aaaa2298bff3379f134db06fc270ec7364a52
+DIST rebase-1510.tar.xz 90412200 SHA256 0a33a34003c95f65d8ec8bbf11907bccad47d0bdddc39030a663df5ef2922f87 SHA512 c76b42df5a5bc64a951693b35a8664195a0fb1b84bdd64f80e8986a705ca1279e51c324153a83272ecb9b3dfb3fd565cb43c2b25c9e37655767c278e6320590e WHIRLPOOL 238841844c19ad028147a4a5a366a219e405b1ae1d0ae79767775518a0ecdabe37948a260724e4053af183ad00799c60da21d57dae84cdc6859e19a04aac314a
diff --git a/sci-biology/rebase/rebase-1510.ebuild b/sci-biology/rebase/rebase-1510.ebuild
new file mode 100644
index 000000000000..1bfa8ba6880d
--- /dev/null
+++ b/sci-biology/rebase/rebase-1510.ebuild
@@ -0,0 +1,46 @@
+# Copyright 1999-2015 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Id$
+
+EAPI=5
+
+MY_PV=${PV#1}
+
+DESCRIPTION="A restriction enzyme database"
+HOMEPAGE="http://rebase.neb.com"
+SRC_URI="https://dev.gentoo.org/~jlec/distfiles/${P}.tar.xz"
+
+SLOT="0"
+LICENSE="public-domain"
+KEYWORDS="~amd64 ~ppc ~x86 ~amd64-linux ~x86-linux ~ppc-macos ~sparc-solaris ~x86-solaris"
+IUSE="emboss minimal"
+
+RDEPEND="emboss? ( >=sci-biology/emboss-5.0.0 )"
+DEPEND="${RDEPEND}"
+
+RESTRICT="binchecks strip"
+
+src_compile() {
+ if use emboss; then
+ echo; einfo "Indexing Rebase for usage with EMBOSS."
+ mkdir REBASE || die
+ EMBOSS_DATA="." rebaseextract -auto -infile withrefm.${MY_PV} \
+ -protofile proto.${MY_PV} -equivalences \
+ || die "Indexing Rebase failed."
+ echo
+ fi
+}
+
+src_install() {
+ if ! use minimal; then
+ insinto /usr/share/${PN}
+ doins withrefm.${MY_PV} proto.${MY_PV}
+ fi
+ newdoc REBASE.DOC README
+ if use emboss; then
+ insinto /usr/share/EMBOSS/data/REBASE
+ doins REBASE/embossre.{enz,ref,sup}
+ insinto /usr/share/EMBOSS/data
+ doins REBASE/embossre.equ
+ fi
+}