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# Copyright 1999-2014 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
# $Id$
EAPI=3
inherit eutils prefix toolchain-funcs versionator
MY_P="${PN}$(delete_all_version_separators)"
DESCRIPTION="Protein Secondary Structure Prediction"
HOMEPAGE="http://bioinf.cs.ucl.ac.uk/psipred/"
SRC_URI="http://bioinf.cs.ucl.ac.uk/downloads/${PN}/${MY_P}.tar.gz"
LICENSE="psipred"
SLOT="0"
KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux"
IUSE=""
RDEPEND="
sci-biology/ncbi-tools
|| ( sci-biology/update-blastdb sci-biology/ncbi-tools++ )"
DEPEND=""
S="${WORKDIR}"
src_prepare() {
rm -f bin/*
epatch \
"${FILESDIR}"/${PV}-Makefile.patch \
"${FILESDIR}"/${PV}-path.patch \
"${FILESDIR}"/${PV}-fgets.patch
eprefixify runpsipred*
}
src_compile() {
emake -C src CC=$(tc-getCC) || die "emake failed"
}
src_install() {
emake -C src DESTDIR="${D}" install || die "installation failed"
dobin runpsipred* bin/* BLAST+/runpsipred* || die
insinto /usr/share/${PN}
doins -r data || die "failed to install data"
dodoc README || die "nothing to read"
}
pkg_postinst() {
elog "Please use the update_blastdb.pl in order to"
elog "maintain your own local blastdb"
}
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