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|
<!DOCTYPE html>
<html>
<head>
<meta charset='utf-8'/>
<link rel="stylesheet" type="text/css" href="log.css"/>
<title>QA check results for repository science</title>
</head>
<body>
<h1>science</h1>
<table class="log">
<tr class="" id="l1"><td><a href="#l1"><span>1</span></a></td><td><pre>{'description': {'en': 'The Gentoo Science Overlay is intended as a place to '
</pre></td></tr>
<tr class="" id="l2"><td><a href="#l2"><span>2</span></a></td><td><pre> 'work\n'
</pre></td></tr>
<tr class="" id="l3"><td><a href="#l3"><span>3</span></a></td><td><pre> ' outside of the main portage tree on experimental '
</pre></td></tr>
<tr class="" id="l4"><td><a href="#l4"><span>4</span></a></td><td><pre> 'ebuilds. Our aim is to\n'
</pre></td></tr>
<tr class="" id="l5"><td><a href="#l5"><span>5</span></a></td><td><pre> ' increase the rate of development of scientific '
</pre></td></tr>
<tr class="" id="l6"><td><a href="#l6"><span>6</span></a></td><td><pre> 'packages for Gentoo, but\n'
</pre></td></tr>
<tr class="" id="l7"><td><a href="#l7"><span>7</span></a></td><td><pre> ' ebuilds in this repository are by their very '
</pre></td></tr>
<tr class="" id="l8"><td><a href="#l8"><span>8</span></a></td><td><pre> 'nature more experimental. If\n'
</pre></td></tr>
<tr class="" id="l9"><td><a href="#l9"><span>9</span></a></td><td><pre> ' you wish to use them you should be willing to help '
</pre></td></tr>
<tr class="" id="l10"><td><a href="#l10"><span>10</span></a></td><td><pre> 'test and report\n'
</pre></td></tr>
<tr class="" id="l11"><td><a href="#l11"><span>11</span></a></td><td><pre> ' bugs. For contribution read '
</pre></td></tr>
<tr class="" id="l12"><td><a href="#l12"><span>12</span></a></td><td><pre> 'https://wiki.gentoo.org/wiki/Project:Science/Contributing\n'
</pre></td></tr>
<tr class="" id="l13"><td><a href="#l13"><span>13</span></a></td><td><pre> ' '},
</pre></td></tr>
<tr class="" id="l14"><td><a href="#l14"><span>14</span></a></td><td><pre> 'feed': ['https://cgit.gentoo.org/proj/sci.git/atom/',
</pre></td></tr>
<tr class="" id="l15"><td><a href="#l15"><span>15</span></a></td><td><pre> 'https://github.com/gentoo-science/sci/commits/master.atom'],
</pre></td></tr>
<tr class="" id="l16"><td><a href="#l16"><span>16</span></a></td><td><pre> 'homepage': 'https://wiki.gentoo.org/wiki/Project:Science',
</pre></td></tr>
<tr class="" id="l17"><td><a href="#l17"><span>17</span></a></td><td><pre> 'name': 'science',
</pre></td></tr>
<tr class="" id="l18"><td><a href="#l18"><span>18</span></a></td><td><pre> 'owner': [{'email': 'sci@gentoo.org', 'name': 'sci', 'type': 'project'}],
</pre></td></tr>
<tr class="" id="l19"><td><a href="#l19"><span>19</span></a></td><td><pre> 'quality': 'experimental',
</pre></td></tr>
<tr class="" id="l20"><td><a href="#l20"><span>20</span></a></td><td><pre> 'source': [{'type': 'git',
</pre></td></tr>
<tr class="" id="l21"><td><a href="#l21"><span>21</span></a></td><td><pre> 'uri': 'https://anongit.gentoo.org/git/proj/sci.git'},
</pre></td></tr>
<tr class="" id="l22"><td><a href="#l22"><span>22</span></a></td><td><pre> {'type': 'git', 'uri': 'git://anongit.gentoo.org/proj/sci.git'},
</pre></td></tr>
<tr class="" id="l23"><td><a href="#l23"><span>23</span></a></td><td><pre> {'type': 'git', 'uri': 'git+ssh://git@git.gentoo.org/proj/sci.git'},
</pre></td></tr>
<tr class="" id="l24"><td><a href="#l24"><span>24</span></a></td><td><pre> {'type': 'git', 'uri': 'https://github.com/gentoo-science/sci.git'},
</pre></td></tr>
<tr class="" id="l25"><td><a href="#l25"><span>25</span></a></td><td><pre> {'type': 'git', 'uri': 'git://github.com/gentoo-science/sci.git'},
</pre></td></tr>
<tr class="" id="l26"><td><a href="#l26"><span>26</span></a></td><td><pre> {'type': 'git', 'uri': 'git@github.com:gentoo-science/sci.git'}],
</pre></td></tr>
<tr class="" id="l27"><td><a href="#l27"><span>27</span></a></td><td><pre> 'status': 'official'}
</pre></td></tr>
<tr class="" id="l28"><td><a href="#l28"><span>28</span></a></td><td><pre>pkgcore 0.12.8
</pre></td></tr>
<tr class="" id="l29"><td><a href="#l29"><span>29</span></a></td><td><pre>
</pre></td></tr>
<tr class="" id="l30"><td><a href="#l30"><span>30</span></a></td><td><pre>$ pmaint --config /var/lib/repo-mirror-ci/data-sync/etc/portage sync science
</pre></td></tr>
<tr class="" id="l31"><td><a href="#l31"><span>31</span></a></td><td><pre>*** syncing science
</pre></td></tr>
<tr class="" id="l32"><td><a href="#l32"><span>32</span></a></td><td><pre>From https://anongit.gentoo.org/git/proj/sci
</pre></td></tr>
<tr class="" id="l33"><td><a href="#l33"><span>33</span></a></td><td><pre> ac0b2fbd3..97e6d3210 master -> origin/master
</pre></td></tr>
<tr class="" id="l34"><td><a href="#l34"><span>34</span></a></td><td><pre>Updating ac0b2fbd3..97e6d3210
</pre></td></tr>
<tr class="" id="l35"><td><a href="#l35"><span>35</span></a></td><td><pre>Fast-forward
</pre></td></tr>
<tr class="" id="l36"><td><a href="#l36"><span>36</span></a></td><td><pre> dev-python/astroscrappy/Manifest | 2 +-
</pre></td></tr>
<tr class="" id="l37"><td><a href="#l37"><span>37</span></a></td><td><pre> ...appy-1.0.8.ebuild => astroscrappy-1.1.0.ebuild} | 7 +-
</pre></td></tr>
<tr class="" id="l38"><td><a href="#l38"><span>38</span></a></td><td><pre> dev-python/bokeh/Manifest | 11 +--
</pre></td></tr>
<tr class="" id="l39"><td><a href="#l39"><span>39</span></a></td><td><pre> dev-python/bokeh/bokeh-2.2.1-r1.ebuild | 85 ----------------------
</pre></td></tr>
<tr class="" id="l40"><td><a href="#l40"><span>40</span></a></td><td><pre> dev-python/bokeh/bokeh-2.2.2-r1.ebuild | 85 ----------------------
</pre></td></tr>
<tr class="" id="l41"><td><a href="#l41"><span>41</span></a></td><td><pre> dev-python/bokeh/bokeh-2.2.3.ebuild | 85 ----------------------
</pre></td></tr>
<tr class="" id="l42"><td><a href="#l42"><span>42</span></a></td><td><pre> dev-python/bokeh/bokeh-2.3.1.ebuild | 85 ----------------------
</pre></td></tr>
<tr class="" id="l43"><td><a href="#l43"><span>43</span></a></td><td><pre> dev-python/bokeh/bokeh-2.3.2.ebuild | 85 ----------------------
</pre></td></tr>
<tr class="" id="l44"><td><a href="#l44"><span>44</span></a></td><td><pre> .../{bokeh-2.3.0.ebuild => bokeh-2.4.2.ebuild} | 32 ++++----
</pre></td></tr>
<tr class="" id="l45"><td><a href="#l45"><span>45</span></a></td><td><pre> .../bokeh/files/bokeh-2.2.1-conftest_py.patch | 56 --------------
</pre></td></tr>
<tr class="" id="l46"><td><a href="#l46"><span>46</span></a></td><td><pre> dev-python/ccdproc/Manifest | 2 +-
</pre></td></tr>
<tr class="" id="l47"><td><a href="#l47"><span>47</span></a></td><td><pre> .../{ccdproc-2.1.0.ebuild => ccdproc-2.3.0.ebuild} | 14 ++--
</pre></td></tr>
<tr class="" id="l48"><td><a href="#l48"><span>48</span></a></td><td><pre> dev-python/gmsh_interop/Manifest | 2 +-
</pre></td></tr>
<tr class="" id="l49"><td><a href="#l49"><span>49</span></a></td><td><pre> ...-2019.1.ebuild => gmsh_interop-2021.1.1.ebuild} | 10 +--
</pre></td></tr>
<tr class="" id="l50"><td><a href="#l50"><span>50</span></a></td><td><pre> dev-python/meshio/Manifest | 1 +
</pre></td></tr>
<tr class="" id="l51"><td><a href="#l51"><span>51</span></a></td><td><pre> dev-python/meshio/meshio-5.3.0.ebuild | 30 ++++++++
</pre></td></tr>
<tr class="" id="l52"><td><a href="#l52"><span>52</span></a></td><td><pre> dev-python/meshpy/Manifest | 3 +-
</pre></td></tr>
<tr class="" id="l53"><td><a href="#l53"><span>53</span></a></td><td><pre> dev-python/meshpy/meshpy-2018.2.1_p1.ebuild | 51 -------------
</pre></td></tr>
<tr class="" id="l54"><td><a href="#l54"><span>54</span></a></td><td><pre> ...meshpy-2018.2.1.ebuild => meshpy-2020.1.ebuild} | 24 +++---
</pre></td></tr>
<tr class="" id="l55"><td><a href="#l55"><span>55</span></a></td><td><pre> dev-python/python-gantt/Manifest | 1 -
</pre></td></tr>
<tr class="" id="l56"><td><a href="#l56"><span>56</span></a></td><td><pre> dev-python/python-gantt/python-gantt-0.6.0.ebuild | 26 -------
</pre></td></tr>
<tr class="" id="l57"><td><a href="#l57"><span>57</span></a></td><td><pre> dev-python/python-igraph/Manifest | 2 -
</pre></td></tr>
<tr class="" id="l58"><td><a href="#l58"><span>58</span></a></td><td><pre> .../python-igraph/python-igraph-0.8.2.ebuild | 36 ---------
</pre></td></tr>
<tr class="" id="l59"><td><a href="#l59"><span>59</span></a></td><td><pre> .../python-igraph/python-igraph-0.8.3.ebuild | 36 ---------
</pre></td></tr>
<tr class="" id="l60"><td><a href="#l60"><span>60</span></a></td><td><pre> dev-python/pyvista/Manifest | 2 +-
</pre></td></tr>
<tr class="" id="l61"><td><a href="#l61"><span>61</span></a></td><td><pre> ...pyvista-0.31.1.ebuild => pyvista-0.33.2.ebuild} | 7 +-
</pre></td></tr>
<tr class="" id="l62"><td><a href="#l62"><span>62</span></a></td><td><pre> dev-python/pyvote/pyvote-0.1.ebuild | 9 +--
</pre></td></tr>
<tr class="" id="l63"><td><a href="#l63"><span>63</span></a></td><td><pre> dev-python/reproject/Manifest | 2 +-
</pre></td></tr>
<tr class="" id="l64"><td><a href="#l64"><span>64</span></a></td><td><pre> ...reproject-0.7.1.ebuild => reproject-0.8.ebuild} | 15 ++--
</pre></td></tr>
<tr class="" id="l65"><td><a href="#l65"><span>65</span></a></td><td><pre> sci-astronomy/libthesky/Manifest | 2 +-
</pre></td></tr>
<tr class="" id="l66"><td><a href="#l66"><span>66</span></a></td><td><pre> ...esky-0.4.1-r1.ebuild => libthesky-0.4.2.ebuild} | 10 +--
</pre></td></tr>
<tr class="" id="l67"><td><a href="#l67"><span>67</span></a></td><td><pre> sci-biology/LINKS/LINKS-2.0.1.ebuild | 5 +-
</pre></td></tr>
<tr class="" id="l68"><td><a href="#l68"><span>68</span></a></td><td><pre> .../{bambus-2.33.ebuild => bambus-2.33-r1.ebuild} | 25 +------
</pre></td></tr>
<tr class="" id="l69"><td><a href="#l69"><span>69</span></a></td><td><pre> sci-biology/ncbi-blast+/ncbi-blast+-2.11.0.ebuild | 3 +-
</pre></td></tr>
<tr class="" id="l70"><td><a href="#l70"><span>70</span></a></td><td><pre> sci-biology/ncbi-blast+/ncbi-blast+-2.2.30.ebuild | 3 +-
</pre></td></tr>
<tr class="" id="l71"><td><a href="#l71"><span>71</span></a></td><td><pre> sci-biology/ncbi-blast+/ncbi-blast+-2.2.31.ebuild | 3 +-
</pre></td></tr>
<tr class="" id="l72"><td><a href="#l72"><span>72</span></a></td><td><pre> sci-biology/ncbi-blast+/ncbi-blast+-2.6.0.ebuild | 3 +-
</pre></td></tr>
<tr class="" id="l73"><td><a href="#l73"><span>73</span></a></td><td><pre> sci-biology/ncbi-blast+/ncbi-blast+-2.8.1.ebuild | 3 +-
</pre></td></tr>
<tr class="" id="l74"><td><a href="#l74"><span>74</span></a></td><td><pre> .../ncbi-tools++/ncbi-tools++-12.0.0.ebuild | 3 +-
</pre></td></tr>
<tr class="" id="l75"><td><a href="#l75"><span>75</span></a></td><td><pre> .../ncbi-tools++/ncbi-tools++-18.0.0.ebuild | 3 +-
</pre></td></tr>
<tr class="" id="l76"><td><a href="#l76"><span>76</span></a></td><td><pre> .../ncbi-tools++/ncbi-tools++-22.0.0.ebuild | 3 +-
</pre></td></tr>
<tr class="" id="l77"><td><a href="#l77"><span>77</span></a></td><td><pre> ...bin-2.5.5.ebuild => ssaha2-bin-2.5.5-r1.ebuild} | 14 ++--
</pre></td></tr>
<tr class="" id="l78"><td><a href="#l78"><span>78</span></a></td><td><pre> ...1.ebuild => tigr-foundation-libs-2.0-r2.ebuild} | 12 +--
</pre></td></tr>
<tr class="" id="l79"><td><a href="#l79"><span>79</span></a></td><td><pre> sci-chemistry/erkale/Manifest | 1 +
</pre></td></tr>
<tr class="" id="l80"><td><a href="#l80"><span>80</span></a></td><td><pre> ...rkale-9999.ebuild => erkale-0_p20220106.ebuild} | 15 ++--
</pre></td></tr>
<tr class="" id="l81"><td><a href="#l81"><span>81</span></a></td><td><pre> sci-libs/libsufr/Manifest | 2 +-
</pre></td></tr>
<tr class="" id="l82"><td><a href="#l82"><span>82</span></a></td><td><pre> ...ibsufr-0.7.5-r1.ebuild => libsufr-0.7.7.ebuild} | 7 +-
</pre></td></tr>
<tr class="" id="l83"><td><a href="#l83"><span>83</span></a></td><td><pre> sci-libs/pg2plplot/Manifest | 2 +-
</pre></td></tr>
<tr class="" id="l84"><td><a href="#l84"><span>84</span></a></td><td><pre> ...lplot-5.13.0.ebuild => pg2plplot-5.13.1.ebuild} | 21 +++---
</pre></td></tr>
<tr class="" id="l85"><td><a href="#l85"><span>85</span></a></td><td><pre> .../clip/{clip-0.7.ebuild => clip-0.7-r1.ebuild} | 14 ++--
</pre></td></tr>
<tr class="" id="l86"><td><a href="#l86"><span>86</span></a></td><td><pre> 50 files changed, 151 insertions(+), 809 deletions(-)
</pre></td></tr>
<tr class="" id="l87"><td><a href="#l87"><span>87</span></a></td><td><pre> rename dev-python/astroscrappy/{astroscrappy-1.0.8.ebuild => astroscrappy-1.1.0.ebuild} (84%)
</pre></td></tr>
<tr class="" id="l88"><td><a href="#l88"><span>88</span></a></td><td><pre> delete mode 100644 dev-python/bokeh/bokeh-2.2.1-r1.ebuild
</pre></td></tr>
<tr class="" id="l89"><td><a href="#l89"><span>89</span></a></td><td><pre> delete mode 100644 dev-python/bokeh/bokeh-2.2.2-r1.ebuild
</pre></td></tr>
<tr class="" id="l90"><td><a href="#l90"><span>90</span></a></td><td><pre> delete mode 100644 dev-python/bokeh/bokeh-2.2.3.ebuild
</pre></td></tr>
<tr class="" id="l91"><td><a href="#l91"><span>91</span></a></td><td><pre> delete mode 100644 dev-python/bokeh/bokeh-2.3.1.ebuild
</pre></td></tr>
<tr class="" id="l92"><td><a href="#l92"><span>92</span></a></td><td><pre> delete mode 100644 dev-python/bokeh/bokeh-2.3.2.ebuild
</pre></td></tr>
<tr class="" id="l93"><td><a href="#l93"><span>93</span></a></td><td><pre> rename dev-python/bokeh/{bokeh-2.3.0.ebuild => bokeh-2.4.2.ebuild} (71%)
</pre></td></tr>
<tr class="" id="l94"><td><a href="#l94"><span>94</span></a></td><td><pre> delete mode 100644 dev-python/bokeh/files/bokeh-2.2.1-conftest_py.patch
</pre></td></tr>
<tr class="" id="l95"><td><a href="#l95"><span>95</span></a></td><td><pre> rename dev-python/ccdproc/{ccdproc-2.1.0.ebuild => ccdproc-2.3.0.ebuild} (68%)
</pre></td></tr>
<tr class="" id="l96"><td><a href="#l96"><span>96</span></a></td><td><pre> rename dev-python/gmsh_interop/{gmsh_interop-2019.1.ebuild => gmsh_interop-2021.1.1.ebuild} (71%)
</pre></td></tr>
<tr class="" id="l97"><td><a href="#l97"><span>97</span></a></td><td><pre> create mode 100644 dev-python/meshio/meshio-5.3.0.ebuild
</pre></td></tr>
<tr class="" id="l98"><td><a href="#l98"><span>98</span></a></td><td><pre> delete mode 100644 dev-python/meshpy/meshpy-2018.2.1_p1.ebuild
</pre></td></tr>
<tr class="" id="l99"><td><a href="#l99"><span>99</span></a></td><td><pre> rename dev-python/meshpy/{meshpy-2018.2.1.ebuild => meshpy-2020.1.ebuild} (70%)
</pre></td></tr>
<tr class="" id="l100"><td><a href="#l100"><span>100</span></a></td><td><pre> delete mode 100644 dev-python/python-gantt/python-gantt-0.6.0.ebuild
</pre></td></tr>
<tr class="" id="l101"><td><a href="#l101"><span>101</span></a></td><td><pre> delete mode 100644 dev-python/python-igraph/python-igraph-0.8.2.ebuild
</pre></td></tr>
<tr class="" id="l102"><td><a href="#l102"><span>102</span></a></td><td><pre> delete mode 100644 dev-python/python-igraph/python-igraph-0.8.3.ebuild
</pre></td></tr>
<tr class="" id="l103"><td><a href="#l103"><span>103</span></a></td><td><pre> rename dev-python/pyvista/{pyvista-0.31.1.ebuild => pyvista-0.33.2.ebuild} (79%)
</pre></td></tr>
<tr class="" id="l104"><td><a href="#l104"><span>104</span></a></td><td><pre> rename dev-python/reproject/{reproject-0.7.1.ebuild => reproject-0.8.ebuild} (67%)
</pre></td></tr>
<tr class="" id="l105"><td><a href="#l105"><span>105</span></a></td><td><pre> rename sci-astronomy/libthesky/{libthesky-0.4.1-r1.ebuild => libthesky-0.4.2.ebuild} (88%)
</pre></td></tr>
<tr class="" id="l106"><td><a href="#l106"><span>106</span></a></td><td><pre> rename sci-biology/bambus/{bambus-2.33.ebuild => bambus-2.33-r1.ebuild} (85%)
</pre></td></tr>
<tr class="" id="l107"><td><a href="#l107"><span>107</span></a></td><td><pre> rename sci-biology/ssaha2-bin/{ssaha2-bin-2.5.5.ebuild => ssaha2-bin-2.5.5-r1.ebuild} (86%)
</pre></td></tr>
<tr class="" id="l108"><td><a href="#l108"><span>108</span></a></td><td><pre> rename sci-biology/tigr-foundation-libs/{tigr-foundation-libs-2.0-r1.ebuild => tigr-foundation-libs-2.0-r2.ebuild} (82%)
</pre></td></tr>
<tr class="" id="l109"><td><a href="#l109"><span>109</span></a></td><td><pre> create mode 100644 sci-chemistry/erkale/Manifest
</pre></td></tr>
<tr class="" id="l110"><td><a href="#l110"><span>110</span></a></td><td><pre> rename sci-chemistry/erkale/{erkale-9999.ebuild => erkale-0_p20220106.ebuild} (83%)
</pre></td></tr>
<tr class="" id="l111"><td><a href="#l111"><span>111</span></a></td><td><pre> rename sci-libs/libsufr/{libsufr-0.7.5-r1.ebuild => libsufr-0.7.7.ebuild} (93%)
</pre></td></tr>
<tr class="" id="l112"><td><a href="#l112"><span>112</span></a></td><td><pre> rename sci-libs/pg2plplot/{pg2plplot-5.13.0.ebuild => pg2plplot-5.13.1.ebuild} (71%)
</pre></td></tr>
<tr class="" id="l113"><td><a href="#l113"><span>113</span></a></td><td><pre> rename sci-visualization/clip/{clip-0.7.ebuild => clip-0.7-r1.ebuild} (80%)
</pre></td></tr>
<tr class="" id="l114"><td><a href="#l114"><span>114</span></a></td><td><pre>*** synced science
</pre></td></tr>
<tr class="" id="l115"><td><a href="#l115"><span>115</span></a></td><td><pre> * Sync succeeded
</pre></td></tr>
<tr class="" id="l116"><td><a href="#l116"><span>116</span></a></td><td><pre>$ git log --format=%ci -1
</pre></td></tr>
<tr class="" id="l117"><td><a href="#l117"><span>117</span></a></td><td><pre>$ git show -q --pretty=format:%G? HEAD
</pre></td></tr>
<tr class="" id="l118"><td><a href="#l118"><span>118</span></a></td><td><pre>$ pmaint --config /var/lib/repo-mirror-ci/data/etc/portage regen --use-local-desc --pkg-desc-index -t 32 science
</pre></td></tr>
<tr class="" id="l119"><td><a href="#l119"><span>119</span></a></td><td><pre> * Cache regenerated successfully
</pre></td></tr>
</table>
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